RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	PRNT	Q86SH4	94 aa		11.66	□□□□□ -0.54
IRF3-231	ENST00000602190	OR2G3	Q8NGZ4	309 aa		11.66	□□□□□ -0.54
IRF3-231	ENST00000602190	PRR34	Q9NV39	138 aa		11.66	□□□□□ -0.54
IRF3-231	ENST00000602190	FABP5P3	A8MUU1	101 aa		11.65	□□□□□ -0.54
IRF3-231	ENST00000602190	GCHFR	P30047	84 aa		11.65	□□□□□ -0.54
IRF3-231	ENST00000602190	CDC34	P49427	236 aa	Predicted RBP	11.65	□□□□□ -0.54
IRF3-231	ENST00000602190	SMIM3	Q9BZL3	60 aa		11.65	□□□□□ -0.54
IRF3-231	ENST00000602190	TRBV7-3	A0A075B6L6	115 aa		11.64	□□□□□ -0.55
IRF3-231	ENST00000602190	TRBV6-8	A0A0A6YYG3	113 aa		11.64	□□□□□ -0.55
IRF3-231	ENST00000602190	SUMO1	P63165	101 aa	Known RBP	11.64	□□□□□ -0.55
IRF3-231	ENST00000602190	MIA	Q16674	131 aa		11.64	□□□□□ -0.55
IRF3-231	ENST00000602190	MPV17L2	Q567V2	206 aa		11.64	□□□□□ -0.55
IRF3-231	ENST00000602190		A0A0D9SG52	128 aa		11.63	□□□□□ -0.55
IRF3-231	ENST00000602190	KRBOX1	C9JBD0	128 aa		11.63	□□□□□ -0.55
IRF3-231	ENST00000602190		H3BVH4	76 aa		11.63	□□□□□ -0.55
IRF3-231	ENST00000602190	ARMS2	P0C7Q2	107 aa		11.63	□□□□□ -0.55
IRF3-231	ENST00000602190	CRIP1	P50238	77 aa		11.63	□□□□□ -0.55
IRF3-231	ENST00000602190	RAB24	Q969Q5	203 aa		11.63	□□□□□ -0.55
IRF3-231	ENST00000602190	ARL2-SNX15	V9GYD0	113 aa		11.63	□□□□□ -0.55
IRF3-231	ENST00000602190	PET100	P0DJ07	73 aa		11.62	□□□□□ -0.55
IRF3-231	ENST00000602190	CNBP	P62633	177 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-231	ENST00000602190	RPL36A	P83881	106 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-231	ENST00000602190	PRR27	Q6MZM9	219 aa		11.62	□□□□□ -0.55
IRF3-231	ENST00000602190	MZT2B	Q6NZ67	158 aa		11.62	□□□□□ -0.55
IRF3-231	ENST00000602190	RPL36AL	Q969Q0	106 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-231	ENST00000602190		B4DEV8	164 aa		11.61	□□□□□ -0.55
IRF3-231	ENST00000602190	CRP	P02741	224 aa		11.61	□□□□□ -0.55
IRF3-231	ENST00000602190	FAM74A4	Q5TZK3	123 aa		11.61	□□□□□ -0.55
IRF3-231	ENST00000602190	KCNIP4	Q6PIL6	250 aa		11.61	□□□□□ -0.55
IRF3-231	ENST00000602190	C15orf54	Q8N8G6	183 aa		11.61	□□□□□ -0.55
IRF3-231	ENST00000602190	OR11H4	Q8NGC9	324 aa		11.61	□□□□□ -0.55
IRF3-231	ENST00000602190	ZC2HC1A	Q96GY0	325 aa		11.61	□□□□□ -0.55
IRF3-231	ENST00000602190		A0A087WWL8	130 aa		11.6	□□□□□ -0.55
IRF3-231	ENST00000602190		A0A1W2PRE2	83 aa		11.6	□□□□□ -0.55
IRF3-231	ENST00000602190		Q86TA4	180 aa		11.6	□□□□□ -0.55
IRF3-231	ENST00000602190	RNF185	Q96GF1	192 aa		11.6	□□□□□ -0.55
IRF3-231	ENST00000602190	PSMG3	Q9BT73	122 aa	Predicted RBP	11.6	□□□□□ -0.55
IRF3-231	ENST00000602190	TMEM167B	Q9NRX6	74 aa		11.6	□□□□□ -0.55
IRF3-231	ENST00000602190	HLA-DQA1	P01909	254 aa		11.59	□□□□□ -0.55
IRF3-231	ENST00000602190	LINC00299	Q6ZSB3	139 aa		11.59	□□□□□ -0.55
IRF3-231	ENST00000602190	LINC01600	Q96MT4	127 aa		11.59	□□□□□ -0.55
IRF3-231	ENST00000602190	TRAV34	A0A0B4J273	112 aa		11.58	□□□□□ -0.56
IRF3-231	ENST00000602190	ANG	P03950	147 aa	Known RBP	11.58	□□□□□ -0.56
IRF3-231	ENST00000602190	NEXN-AS1	Q8NBZ9	246 aa		11.58	□□□□□ -0.56
IRF3-231	ENST00000602190	CLRN3	Q8NCR9	226 aa		11.58	□□□□□ -0.56
IRF3-231	ENST00000602190	VAX2	Q9UIW0	290 aa		11.58	□□□□□ -0.56
IRF3-231	ENST00000602190	CXorf1	O96002	111 aa		11.57	□□□□□ -0.56
IRF3-231	ENST00000602190	PKIA	P61925	76 aa		11.57	□□□□□ -0.56
IRF3-231	ENST00000602190	LINC01559	Q495D7	138 aa		11.57	□□□□□ -0.56
IRF3-231	ENST00000602190	NTM-AS1	Q6ZSK4	140 aa		11.57	□□□□□ -0.56
IRF3-231	ENST00000602190	SPACA4	Q8TDM5	124 aa		11.57	□□□□□ -0.56
IRF3-231	ENST00000602190		A0A087WYN8	130 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	TMEM262	E9PQX1	116 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	SERF2	P84101	59 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	ZNF674	Q2M3X9	581 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	ZFP82	Q8N141	532 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	MARVELD1	Q9BSK0	173 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	PLAC8	Q9NZF1	115 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	PHLDA3	Q9Y5J5	127 aa		11.56	□□□□□ -0.56
IRF3-231	ENST00000602190	GRIFIN	A4D1Z8	144 aa		11.55	□□□□□ -0.56
IRF3-231	ENST00000602190	SH2D1A	O60880	128 aa		11.55	□□□□□ -0.56
IRF3-231	ENST00000602190	PTTG1	O95997	202 aa		11.55	□□□□□ -0.56
IRF3-231	ENST00000602190	SLPI	P03973	132 aa		11.55	□□□□□ -0.56
IRF3-231	ENST00000602190	RAB4B	P61018	213 aa		11.55	□□□□□ -0.56
IRF3-231	ENST00000602190	INMT-MINDY4	F8WBC2	141 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190		M0R036	132 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190		M0R381	172 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190	PEX7	O00628	323 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190	TPT1	P13693	172 aa	Known RBP	11.54	□□□□□ -0.56
IRF3-231	ENST00000602190	ATP6V0C	P27449	155 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190	HSD17B11	Q8NBQ5	300 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190	ENKUR	Q8TC29	256 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190	ZFP30	Q9Y2G7	519 aa		11.54	□□□□□ -0.56
IRF3-231	ENST00000602190	MB	P02144	154 aa		11.53	□□□□□ -0.56
IRF3-231	ENST00000602190	RBX1	P62877	108 aa		11.53	□□□□□ -0.56
IRF3-231	ENST00000602190	IFITM3	Q01628	133 aa		11.53	□□□□□ -0.56
IRF3-231	ENST00000602190	TNFSF18	Q9UNG2	199 aa		11.53	□□□□□ -0.56
IRF3-231	ENST00000602190	TRBV6-1	A0A0K0K1D8	114 aa		11.52	□□□□□ -0.57
IRF3-231	ENST00000602190	KRTAP10-8	P60410	259 aa		11.52	□□□□□ -0.57
IRF3-231	ENST00000602190	ZNF726P1	Q15940	193 aa		11.52	□□□□□ -0.57
IRF3-231	ENST00000602190	TMEM97	Q5BJF2	176 aa		11.52	□□□□□ -0.57
IRF3-231	ENST00000602190	FAM162B	Q5T6X4	162 aa		11.52	□□□□□ -0.57
IRF3-231	ENST00000602190	HIST1H2BA	Q96A08	127 aa		11.52	□□□□□ -0.57
IRF3-231	ENST00000602190	CHTF8	P0CG12	524 aa		11.51	□□□□□ -0.57
IRF3-231	ENST00000602190	LINC00269	Q8N2A0	174 aa		11.51	□□□□□ -0.57
IRF3-231	ENST00000602190	CHCHD5	Q9BSY4	110 aa		11.51	□□□□□ -0.57
IRF3-231	ENST00000602190	IGHV3-64	A0A075B6Q5	118 aa		11.5	□□□□□ -0.57
IRF3-231	ENST00000602190		A0A0J9YXV3	536 aa		11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	PHOX2A	O14813	284 aa		11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	UPK1B	O75841	260 aa		11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	CXCL1	P09341	107 aa		11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	ODF1	Q14990	250 aa		11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	IQCJ	Q1A5X6	159 aa		11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	NKX6-2	Q9C056	277 aa	Predicted RBP	11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.5	□□□□□ -0.57
IRF3-231	ENST00000602190	FAM74A7	A6NL05	159 aa		11.49	□□□□□ -0.57
IRF3-231	ENST00000602190	AQP10	Q96PS8	301 aa		11.49	□□□□□ -0.57
IRF3-231	ENST00000602190	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.49	□□□□□ -0.57
IRF3-231	ENST00000602190	SNAI2	O43623	268 aa		11.48	□□□□□ -0.57
IRF3-231	ENST00000602190	LTA	P01374	205 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms