RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 SERTM2A0A1B0GWG4 89 aa10.08□□□□□ -0.8
SSBP4-211ENST00000601614 RAB2AP61019 212 aa10.08□□□□□ -0.8
SSBP4-211ENST00000601614 MIAQ16674 131 aa10.08□□□□□ -0.8
SSBP4-211ENST00000601614 C5orf17Q8NAS9 161 aa10.08□□□□□ -0.8
SSBP4-211ENST00000601614 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
SSBP4-211ENST00000601614 TRBV7-3A0A075B6L6 115 aa10.07□□□□□ -0.8
SSBP4-211ENST00000601614 CCDC160A6NGH7 325 aa10.07□□□□□ -0.8
SSBP4-211ENST00000601614 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
SSBP4-211ENST00000601614 CNBPP62633 177 aaKnown RBP10.07□□□□□ -0.8
SSBP4-211ENST00000601614 ZFP69Q49AA0 526 aa10.07□□□□□ -0.8
SSBP4-211ENST00000601614 PRR34Q9NV39 138 aa10.07□□□□□ -0.8
SSBP4-211ENST00000601614 ARMS2P0C7Q2 107 aa10.06□□□□□ -0.8
SSBP4-211ENST00000601614 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
SSBP4-211ENST00000601614 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
SSBP4-211ENST00000601614 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
SSBP4-211ENST00000601614 DPH3Q96FX2 82 aa10.06□□□□□ -0.8
SSBP4-211ENST00000601614 RNF185Q96GF1 192 aa10.06□□□□□ -0.8
SSBP4-211ENST00000601614 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
SSBP4-211ENST00000601614 SMIM3Q9BZL3 60 aa10.06□□□□□ -0.8
SSBP4-211ENST00000601614 RBM38Q9H0Z9 239 aaKnown RBP10.06□□□□□ -0.8
SSBP4-211ENST00000601614 PLAC8Q9NZF1 115 aa10.06□□□□□ -0.8
SSBP4-211ENST00000601614 TRBV10-1A0A0K0K1A3 114 aa10.05□□□□□ -0.8
SSBP4-211ENST00000601614 PTTG1O95997 202 aa10.05□□□□□ -0.8
SSBP4-211ENST00000601614 WDR73Q6P4I2 378 aa10.05□□□□□ -0.8
SSBP4-211ENST00000601614 HSPB11Q9Y547 144 aa10.05□□□□□ -0.8
SSBP4-211ENST00000601614 TRAV34A0A0B4J273 112 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 A0A1W2PPV4 95 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 PRR3P79522 188 aaKnown RBP10.04□□□□□ -0.8
SSBP4-211ENST00000601614 DNLZQ5SXM8 178 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 OR11H4Q8NGC9 324 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 OR10G8Q8NGN5 311 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 SCGB1C1Q8TD33 95 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 EPDR1Q9UM22 224 aa10.04□□□□□ -0.8
SSBP4-211ENST00000601614 IGHV3-64A0A075B6Q5 118 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 hDV102S1A0JD36 115 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 GRIFINA4D1Z8 144 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 B4DEV8 164 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 K7EQM0 130 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 CRIP1P50238 77 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 SUMO1P63165 101 aaKnown RBP10.03□□□□□ -0.8
SSBP4-211ENST00000601614 NTM-AS1Q6ZSK4 140 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 LINC00269Q8N2A0 174 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 CLRN3Q8NCR9 226 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 SUN5Q8TC36 379 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
SSBP4-211ENST00000601614 IGLV10-54A0A075B6I4 117 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 MUC21A0A0G2JKD1 596 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 FABP5P3A8MUU1 101 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 KRBOX1C9JBD0 128 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 M0R036 132 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 STAG3L2P0CL84 134 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 STAG3L3P0CL85 134 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 RBX1P62877 108 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 SAPCD1Q5SSQ6 148 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 C7orf33Q8WU49 177 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 ARL2-SNX15V9GYD0 113 aa10.02□□□□□ -0.81
SSBP4-211ENST00000601614 M0R381 172 aa10.01□□□□□ -0.81
SSBP4-211ENST00000601614 GCHFRP30047 84 aa10□□□□□ -0.81
SSBP4-211ENST00000601614 CDC34P49427 236 aaPredicted RBP10□□□□□ -0.81
SSBP4-211ENST00000601614 GAGE6Q13070 117 aa10□□□□□ -0.81
SSBP4-211ENST00000601614 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
SSBP4-211ENST00000601614 PRR27Q6MZM9 219 aa9.99□□□□□ -0.81
SSBP4-211ENST00000601614 PPP1R1CQ8WVI7 109 aa9.99□□□□□ -0.81
SSBP4-211ENST00000601614 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
SSBP4-211ENST00000601614 H2BFSP57053 126 aa9.98□□□□□ -0.81
SSBP4-211ENST00000601614 TMSB15BA0A087X1C1 80 aa9.97□□□□□ -0.81
SSBP4-211ENST00000601614 SH2D1AO60880 128 aa9.97□□□□□ -0.81
SSBP4-211ENST00000601614 TPT1P13693 172 aaKnown RBP9.97□□□□□ -0.81
SSBP4-211ENST00000601614 RPL12P30050 165 aaKnown RBP9.97□□□□□ -0.81
SSBP4-211ENST00000601614 COX6A2Q02221 97 aa9.97□□□□□ -0.81
SSBP4-211ENST00000601614 REG3AQ06141 175 aa9.97□□□□□ -0.81
SSBP4-211ENST00000601614 Q86TA4 180 aa9.97□□□□□ -0.81
SSBP4-211ENST00000601614 RAB24Q969Q5 203 aa9.97□□□□□ -0.81
SSBP4-211ENST00000601614 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
SSBP4-211ENST00000601614 FAM240BA0A1B0GVZ2 78 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 RAB4BP61018 213 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 PKIAP61925 76 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 ZFP82Q8N141 532 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 PRSS3P2Q8NHM4 247 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 MUC2Q02817 5179 aa9.96□□□□□ -0.82
SSBP4-211ENST00000601614 MPC2O95563 127 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
SSBP4-211ENST00000601614 ZNF56Q15929 161 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 REG3GQ6UW15 175 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 LYPD6BQ8NI32 183 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 GFRA4Q9GZZ7 299 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 VAX2Q9UIW0 290 aa9.95□□□□□ -0.82
SSBP4-211ENST00000601614 IGKV2-24A0A0C4DH68 120 aa9.94□□□□□ -0.82
SSBP4-211ENST00000601614 RAB5CP51148 216 aa9.94□□□□□ -0.82
SSBP4-211ENST00000601614 CYCSP99999 105 aaKnown RBP9.94□□□□□ -0.82
SSBP4-211ENST00000601614 C15orf56Q8N910 161 aa9.94□□□□□ -0.82
SSBP4-211ENST00000601614 TRBV6-1A0A0K0K1D8 114 aa9.93□□□□□ -0.82
SSBP4-211ENST00000601614 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
SSBP4-211ENST00000601614 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms