RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 OR4E1P0C645 316 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 MAJINQ3KP22 176 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 LCN15Q6UWW0 184 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 BPIFCQ8NFQ6 507 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 DTD1Q8TEA8 209 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 RMI2Q96E14 147 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 ZC2HC1AQ96GY0 325 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 SLC50A1Q9BRV3 221 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 TXNL4BQ9NX01 149 aaKnown RBP2.48□□□□□ -2.01
VRK3-222ENST00000601324 PSORS1C2Q9UIG4 136 aa2.48□□□□□ -2.01
VRK3-222ENST00000601324 A0A0B4J2A0 478 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 GABARAPH6UMI1 98 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 M0R3E3 92 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 GOSR2O14653 212 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 MED6O75586 246 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 EIF3GO75821 320 aaKnown RBP eCLIP2.47□□□□□ -2.01
VRK3-222ENST00000601324 GABARAPO95166 117 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 ATP6V1G2O95670 118 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 S100A1P23297 94 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 S100GP29377 79 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 RNASE4P34096 147 aaKnown RBP2.47□□□□□ -2.01
VRK3-222ENST00000601324 RCVRNP35243 200 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 DEFB116Q30KQ4 102 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 SMUG1Q53HV7 270 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 CYP2G1PQ6ZSU1 146 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 LINC00173Q6ZV60 143 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 PACRGLQ8N7B6 248 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 OR4C5Q8NGB2 326 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 LINC00477Q96M19 166 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 RTBDNQ9BSG5 229 aaPredicted RBP2.47□□□□□ -2.01
VRK3-222ENST00000601324 IFT46Q9NQC8 304 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 SHPKQ9UHJ6 478 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 HIGD1AQ9Y241 93 aa2.47□□□□□ -2.01
VRK3-222ENST00000601324 SYNE2Q8WXH0 6885 aaKnown RBP2.46□□□□□ -2.01
VRK3-222ENST00000601324 FAM25EA8MYX2 175 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 M0R2P5 195 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 HYPMO75409 117 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 SULT1A3P0DMM9 295 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 SULT1A4P0DMN0 295 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 SDC2P34741 201 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 UBE2MP61081 183 aaKnown RBP2.46□□□□□ -2.02
VRK3-222ENST00000601324 TSPAN5P62079 268 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 RHOHQ15669 191 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 CFAP126Q5VTH2 177 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 ZNF664Q8N3J9 261 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 OR13C8Q8NGS7 320 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 Q8TAT8 98 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 UBE2WQ96B02 151 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 CHCHD7Q9BUK0 85 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 ARV1Q9H2C2 271 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 CYTL1Q9NRR1 136 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 ZNF492Q9P255 531 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 CACFD1Q9UGQ2 172 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 PRELID1Q9Y255 219 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 PXMP4Q9Y6I8 212 aa2.46□□□□□ -2.02
VRK3-222ENST00000601324 IGKV2-28A0A075B6P5 120 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 A0A1B0GVG6 124 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 FABP12A6NFH5 140 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 CRYM-AS1A6NIL9 109 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 CIB2O75838 187 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 IGKV2D-28P01615 120 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 OR10J4P0C629 311 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 LINC00869P0C866 280 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 S100A7P31151 101 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 S100A5P33763 92 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 PRSS3P35030 304 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 ZNF266Q14584 549 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 SMCO1Q147U7 214 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 Q6AWC8 147 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 SLC7A5P1Q8MH63 180 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 CYB561D1Q8N8Q1 229 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 TERB2Q8NHR7 220 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 C2orf50Q96LR7 162 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 PRADC1Q9BSG0 188 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 NAA60Q9H7X0 242 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 C8orf4Q9NR00 106 aa2.45□□□□□ -2.02
VRK3-222ENST00000601324 IGLV4-60A0A075B6I1 120 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 TRBV19A0A075B6N1 114 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 IGHV3-64A0A075B6Q5 118 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 IGKV2-40A0A087WW87 121 aaPredicted RBP2.44□□□□□ -2.02
VRK3-222ENST00000601324 A0A087WWC5 75 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 FAM24AA6NFZ4 105 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 TAAR5O14804 337 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 GNRH2O43555 120 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 IGKV2D-40P01614 121 aaPredicted RBP2.44□□□□□ -2.02
VRK3-222ENST00000601324 CD3DP04234 171 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 IL5P05113 134 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 GPX1P07203 203 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 OR5G3P0C626 314 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 TAGLN2P37802 199 aaKnown RBP2.44□□□□□ -2.02
VRK3-222ENST00000601324 INPP1P49441 399 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 POLR2GP62487 172 aaKnown RBP eCLIP2.44□□□□□ -2.02
VRK3-222ENST00000601324 RAB11AP62491 216 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 CTAG1AP78358 180 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 MT1HP80294 61 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 Q0VG73 95 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 SPCS2Q15005 226 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 NDUFA5Q16718 116 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 LINC00305Q7Z4B0 112 aa2.44□□□□□ -2.02
VRK3-222ENST00000601324 LYZL2Q7Z4W2 148 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms