RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 PYGO2Q9BRQ0 406 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 GSN-AS1Q9NRJ2 163 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 LY96Q9Y6Y9 160 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 TRAV9-2A0A087WT02 112 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 TMEM218A2RU14 115 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 F8W036 122 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 K7EN84 100 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 ORM1P02763 201 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 ADIRFQ15847 76 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 ANXA2RQ3ZCQ2 193 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 KCNS1Q96KK3 526 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 LINC00467Q9BRT7 94 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 SDF2L1Q9HCN8 221 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 DNAH8Q96JB1 4490 aa6.7□□□□□ -1.34
HIF3A-219ENST00000600879 M0R036 132 aa6.69□□□□□ -1.34
HIF3A-219ENST00000600879 PSCAO43653 123 aa6.69□□□□□ -1.34
HIF3A-219ENST00000600879 RPL23P62829 140 aaKnown RBP6.69□□□□□ -1.34
HIF3A-219ENST00000600879 DAZ2Q13117 558 aaKnown RBP6.69□□□□□ -1.34
HIF3A-219ENST00000600879 NDUFA5Q16718 116 aa6.69□□□□□ -1.34
HIF3A-219ENST00000600879 LINC01551Q86U37 167 aa6.69□□□□□ -1.34
HIF3A-219ENST00000600879 SLC7A5P1Q8MH63 180 aa6.69□□□□□ -1.34
HIF3A-219ENST00000600879 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
HIF3A-219ENST00000600879 TP53TG3Q9ULZ0 132 aa6.69□□□□□ -1.34
HIF3A-219ENST00000600879 RNF213Q63HN8 5207 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 TMSB15BA0A087X1C1 80 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 B4DEV8 164 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 GNRH2O43555 120 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 P01737 135 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 TYMSP04818 313 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 ADCYAP1P18509 176 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 EVI2AP22794 236 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 RPL19P84098 196 aaKnown RBP6.68□□□□□ -1.34
HIF3A-219ENST00000600879 IBA57Q5T440 356 aaKnown RBP6.68□□□□□ -1.34
HIF3A-219ENST00000600879 NUDT10Q8NFP7 164 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 ISOC2Q96AB3 205 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 NUDT11Q96G61 164 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
HIF3A-219ENST00000600879 RNASE7Q9H1E1 156 aaKnown RBP6.68□□□□□ -1.34
HIF3A-219ENST00000600879 MRPL16Q9NX20 251 aaKnown RBP6.68□□□□□ -1.34
HIF3A-219ENST00000600879 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 IGKV3D-20A0A0C4DH25 116 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 GRIFINA4D1Z8 144 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 C19orf71A6NCJ1 209 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 LRCOL1A6NCL2 159 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 KRBOX1C9JBD0 128 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 GATCO43716 136 aaKnown RBP6.67□□□□□ -1.34
HIF3A-219ENST00000600879 CRYGDP07320 174 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 ZNF415Q09FC8 603 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 TDRG1Q3Y452 100 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 LINC01559Q495D7 138 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 OR2D3Q8NGH3 330 aa6.67□□□□□ -1.34
HIF3A-219ENST00000600879 S100A4P26447 101 aaKnown RBP6.66□□□□□ -1.34
HIF3A-219ENST00000600879 ASIPP42127 132 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 CRYBA4P53673 196 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 RPS20P60866 119 aaKnown RBP6.66□□□□□ -1.34
HIF3A-219ENST00000600879 PNRC1Q12796 327 aaPredicted RBP6.66□□□□□ -1.34
HIF3A-219ENST00000600879 MRPL23Q16540 153 aaKnown RBP6.66□□□□□ -1.34
HIF3A-219ENST00000600879 FAM231DQ6ZW35 169 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 NEGR1Q7Z3B1 354 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 Q8N814 137 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 C15orf54Q8N8G6 183 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
HIF3A-219ENST00000600879 RPP21Q9H633 154 aaKnown RBP6.66□□□□□ -1.34
HIF3A-219ENST00000600879 Q9HAA7 133 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 OSTCQ9NRP0 149 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 PRO0255Q9UI72 69 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 HHLA3Q9XRX5 114 aa6.66□□□□□ -1.34
HIF3A-219ENST00000600879 IGHV3-16A0A0C4DH30 117 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 XKRY2A2RUG3 117 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 SPINK4O60575 86 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 CXCL1P09341 107 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 SRIP30626 198 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 TCL1AP56279 114 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 FHL2Q14192 279 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 OR10G8Q8NGN5 311 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 SFRP2Q96HF1 295 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 SPXQ9BT56 116 aa6.65□□□□□ -1.34
HIF3A-219ENST00000600879 CARHSP1Q9Y2V2 147 aaKnown RBP6.65□□□□□ -1.34
HIF3A-219ENST00000600879 H3BVH4 76 aa6.64□□□□□ -1.35
HIF3A-219ENST00000600879 K7EQD1 137 aa6.64□□□□□ -1.35
HIF3A-219ENST00000600879 ARMS2P0C7Q2 107 aa6.64□□□□□ -1.35
HIF3A-219ENST00000600879 GZMBP10144 247 aa6.64□□□□□ -1.35
HIF3A-219ENST00000600879 LINC01620Q4KN68 170 aa6.64□□□□□ -1.35
HIF3A-219ENST00000600879 DNLZQ5SXM8 178 aa6.64□□□□□ -1.35
HIF3A-219ENST00000600879 C10orf91Q5T1B1 145 aa6.64□□□□□ -1.35
HIF3A-219ENST00000600879 TRGV4A0A0C4DH28 118 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 A8MWL6 223 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 PPP1R2P9O14990 202 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 APOC3P02656 99 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 MT-ND4LP03901 98 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 RNASE3P12724 160 aaKnown RBP6.63□□□□□ -1.35
HIF3A-219ENST00000600879 GYPEP15421 78 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 CT83Q5H943 113 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 C9orf85Q96MD7 179 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 V9GYV3 84 aa6.63□□□□□ -1.35
HIF3A-219ENST00000600879 KRTAP10-4P60372 401 aaPredicted RBP6.62□□□□□ -1.35
HIF3A-219ENST00000600879 WFDC2Q14508 124 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms