RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 MYO18BQ8IUG5 2567 aa15.07■□□□□ 0
SHKBP1-225ENST00000600733 MDFICQ9P1T7 246 aa15.06■□□□□ 0
SHKBP1-225ENST00000600733 IGIPA6NJ69 53 aa15.05■□□□□ 0
SHKBP1-225ENST00000600733 ZNF815PA8K554 130 aa15.05■□□□□ 0
SHKBP1-225ENST00000600733 CD300EQ496F6 205 aaPredicted RBP15.05■□□□□ 0
SHKBP1-225ENST00000600733 IGLV4-69A0A075B6H9 119 aa15.05■□□□□ -0
SHKBP1-225ENST00000600733 SDHAF1A6NFY7 115 aa15.05■□□□□ -0
SHKBP1-225ENST00000600733 C11orf86A6NJI1 115 aa15.05■□□□□ -0
SHKBP1-225ENST00000600733 POLQO75417 2590 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 LINC01619G3V211 115 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 RPL32P62910 135 aaKnown RBP15.04■□□□□ -0
SHKBP1-225ENST00000600733 SCGB2A2Q13296 93 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 SAMD13Q5VXD3 122 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 FOXI2Q6ZQN5 318 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 KLHL30-AS1Q8NEE0 82 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 PLEKHB2Q96CS7 222 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 IGHV3-16A0A0C4DH30 117 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 A0A0J9YX75 114 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 RPL24P83731 157 aaKnown RBP15.04■□□□□ -0
SHKBP1-225ENST00000600733 KIR2DL4Q99706 377 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 CENPEQ02224 2701 aa15.04■□□□□ -0
SHKBP1-225ENST00000600733 VCYO14598 125 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 COX6B1P14854 86 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 COTL1Q14019 142 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 ZNF580Q9UK33 172 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 ANKRD17O75179 2603 aaKnown RBP15.03■□□□□ -0
SHKBP1-225ENST00000600733 SYNJ2BPP57105 145 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 SPINK13Q1W4C9 94 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 AMTNQ6UX39 209 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 Q8N1Y9 231 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 MAPK1IP1LQ8NDC0 245 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 C9orf85Q96MD7 179 aa15.03■□□□□ -0
SHKBP1-225ENST00000600733 TEX48A0A1B0GUV7 120 aa15.02□□□□□ -0.01
SHKBP1-225ENST00000600733 H3BMG7 143 aa15.02□□□□□ -0.01
SHKBP1-225ENST00000600733 SNRPD3P62318 126 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-225ENST00000600733 SCGB1D4Q6XE38 83 aa15.02□□□□□ -0.01
SHKBP1-225ENST00000600733 DUX5Q96PT3 197 aa15.02□□□□□ -0.01
SHKBP1-225ENST00000600733 MXRA5Q9NR99 2828 aa15.02□□□□□ -0.01
SHKBP1-225ENST00000600733 A0A1B0GWB2 263 aa15.01□□□□□ -0.01
SHKBP1-225ENST00000600733 LGALS9O00182 355 aa15.01□□□□□ -0.01
SHKBP1-225ENST00000600733 RRN3P1Q2M238 152 aa15.01□□□□□ -0.01
SHKBP1-225ENST00000600733 ZNF256Q9Y2P7 627 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-225ENST00000600733 CREBBPQ92793 2442 aa15.01□□□□□ -0.01
SHKBP1-225ENST00000600733 K7EQG2 157 aa15.01□□□□□ -0.01
SHKBP1-225ENST00000600733 PMVKQ15126 192 aa15.01□□□□□ -0.01
SHKBP1-225ENST00000600733 GATA3P23771 443 aa15□□□□□ -0.01
SHKBP1-225ENST00000600733 ZNF56Q15929 161 aa15□□□□□ -0.01
SHKBP1-225ENST00000600733 FBN2P35556 2912 aa15□□□□□ -0.01
SHKBP1-225ENST00000600733 TRBV27A0A0K0K1C4 114 aa15□□□□□ -0.01
SHKBP1-225ENST00000600733 MORN3Q6PF18 240 aaPredicted RBP15□□□□□ -0.01
SHKBP1-225ENST00000600733 ODF3Q96PU9 254 aa15□□□□□ -0.01
SHKBP1-225ENST00000600733 WFDC2Q14508 124 aa14.99□□□□□ -0.01
SHKBP1-225ENST00000600733 CACNA1AO00555 2505 aa14.99□□□□□ -0.01
SHKBP1-225ENST00000600733 M0QY20 66 aa14.98□□□□□ -0.01
SHKBP1-225ENST00000600733 MTURNQ8N3F0 131 aa14.98□□□□□ -0.01
SHKBP1-225ENST00000600733 LINC01356Q8N9X3 169 aa14.98□□□□□ -0.01
SHKBP1-225ENST00000600733 ACACBO00763 2458 aa14.98□□□□□ -0.01
SHKBP1-225ENST00000600733 IGHV1OR15-1A0A075B7D0 117 aa14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 TRBV6-5A0A0K0K1A5 114 aa14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 SRSF9Q13242 221 aaKnown RBP eCLIP14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 TMEM141Q96I45 108 aa14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 TIMM17AQ99595 171 aa14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 HOXA3O43365 443 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 TGFAP01135 160 aa14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 SYT8Q8NBV8 401 aa14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 ZNRF2Q8NHG8 242 aa14.97□□□□□ -0.01
SHKBP1-225ENST00000600733 OPRPNQ99935 248 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-225ENST00000600733 LINC01549A6NIU2 74 aa14.96□□□□□ -0.01
SHKBP1-225ENST00000600733 TSPEAR-AS2P59090 65 aa14.96□□□□□ -0.01
SHKBP1-225ENST00000600733 TMEM170BQ5T4T1 132 aa14.96□□□□□ -0.01
SHKBP1-225ENST00000600733 PGPEP1Q9NXJ5 209 aa14.96□□□□□ -0.01
SHKBP1-225ENST00000600733 F8W1H4 67 aa14.95□□□□□ -0.02
SHKBP1-225ENST00000600733 DSCR9P59020 149 aa14.95□□□□□ -0.02
SHKBP1-225ENST00000600733 HERVK_113P61574 105 aa14.95□□□□□ -0.02
SHKBP1-225ENST00000600733 PAPPA-AS1Q5QFB9 102 aa14.95□□□□□ -0.02
SHKBP1-225ENST00000600733 TMEM89A2RUT3 159 aa14.95□□□□□ -0.02
SHKBP1-225ENST00000600733 HOXD3P31249 432 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-225ENST00000600733 ZNF876PQ49A33 203 aa14.95□□□□□ -0.02
SHKBP1-225ENST00000600733 A0A096LNT2 108 aa14.94□□□□□ -0.02
SHKBP1-225ENST00000600733 FAM208BQ5VWN6 2430 aa14.94□□□□□ -0.02
SHKBP1-225ENST00000600733 SPANXB1Q9NS25 103 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-225ENST00000600733 MRPL16Q9NX20 251 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-225ENST00000600733 A0A0J9YY99 117 aa14.93□□□□□ -0.02
SHKBP1-225ENST00000600733 SH2D6Q7Z4S9 175 aa14.93□□□□□ -0.02
SHKBP1-225ENST00000600733 VPREB3Q9UKI3 123 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 TMEM238LA0A1B0GVL6 79 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 A6NJY4 79 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 P0DMU3 169 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 FAM231AP0DMU4 169 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 FAM231CP0DMU5 169 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 UBE2D1P51668 147 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 ETDBQ3ZM63 59 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 SFTA2Q6UW10 78 aa14.92□□□□□ -0.02
SHKBP1-225ENST00000600733 HTN1P15515 57 aa14.91□□□□□ -0.02
SHKBP1-225ENST00000600733 GAGE13Q4V321 117 aa14.91□□□□□ -0.02
SHKBP1-225ENST00000600733 TRPT1Q86TN4 253 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-225ENST00000600733 RBMY1A1P0DJD3 496 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-225ENST00000600733 RBMY1CP0DJD4 496 aa14.91□□□□□ -0.02
SHKBP1-225ENST00000600733 RBMY1FQ15415 496 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-225ENST00000600733 NSUN5P1Q3KNT7 163 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms