RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 SAMD10Q9BYL1 202 aa10.58□□□□□ -0.72
VRK3-221ENST00000600284 KRTAP10-1P60331 282 aa10.57□□□□□ -0.72
VRK3-221ENST00000600284 EIF5AP63241 154 aaKnown RBP10.57□□□□□ -0.72
VRK3-221ENST00000600284 C14orf178Q8N769 122 aaPredicted RBP10.57□□□□□ -0.72
VRK3-221ENST00000600284 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
VRK3-221ENST00000600284 KANTRA0A1W2PQU2 76 aa10.56□□□□□ -0.72
VRK3-221ENST00000600284 EPM2AB3EWF7 344 aa10.56□□□□□ -0.72
VRK3-221ENST00000600284 TOR2AQ5JU69 321 aa10.56□□□□□ -0.72
VRK3-221ENST00000600284 ZFP82Q8N141 532 aa10.56□□□□□ -0.72
VRK3-221ENST00000600284 FAM213BQ8TBF2 198 aa10.56□□□□□ -0.72
VRK3-221ENST00000600284 ZNF471Q9BX82 626 aaPredicted RBP10.56□□□□□ -0.72
VRK3-221ENST00000600284 Q9HAA7 133 aa10.56□□□□□ -0.72
VRK3-221ENST00000600284 BCL2L11O43521 198 aa10.55□□□□□ -0.72
VRK3-221ENST00000600284 PFDN1O60925 122 aa10.55□□□□□ -0.72
VRK3-221ENST00000600284 Q8N814 137 aa10.55□□□□□ -0.72
VRK3-221ENST00000600284 Q9UF83 564 aa10.55□□□□□ -0.72
VRK3-221ENST00000600284 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 IGLV5-52A0A0A0MRZ9 124 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 M0R381 172 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 CXCL1P09341 107 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 H2AFB1P0C5Y9 115 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 FAM74A4Q5TZK3 123 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 MLST8Q9BVC4 326 aa10.54□□□□□ -0.72
VRK3-221ENST00000600284 A0A087WWL8 130 aa10.53□□□□□ -0.72
VRK3-221ENST00000600284 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
VRK3-221ENST00000600284 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
VRK3-221ENST00000600284 SCO2A0A1W2PP80 73 aa10.52□□□□□ -0.73
VRK3-221ENST00000600284 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.73
VRK3-221ENST00000600284 A0A1B0GV50 99 aa10.51□□□□□ -0.73
VRK3-221ENST00000600284 RPL36AP83881 106 aaKnown RBP10.51□□□□□ -0.73
VRK3-221ENST00000600284 TMUB2Q71RG4 321 aa10.51□□□□□ -0.73
VRK3-221ENST00000600284 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
VRK3-221ENST00000600284 NIT1Q86X76 327 aa10.51□□□□□ -0.73
VRK3-221ENST00000600284 Q8N3U1 123 aa10.51□□□□□ -0.73
VRK3-221ENST00000600284 FRZBQ92765 325 aa10.51□□□□□ -0.73
VRK3-221ENST00000600284 RPL36ALQ969Q0 106 aaKnown RBP10.51□□□□□ -0.73
VRK3-221ENST00000600284 CHCHD7Q9BUK0 85 aa10.51□□□□□ -0.73
VRK3-221ENST00000600284 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
VRK3-221ENST00000600284 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
VRK3-221ENST00000600284 URGCP-MRPS24S4R325 110 aa10.51□□□□□ -0.73
VRK3-221ENST00000600284 TRBV7-3A0A075B6L6 115 aa10.5□□□□□ -0.73
VRK3-221ENST00000600284 RAB4BP61018 213 aa10.5□□□□□ -0.73
VRK3-221ENST00000600284 OR10G8Q8NGN5 311 aa10.5□□□□□ -0.73
VRK3-221ENST00000600284 TRAV1-1A0A0B4J248 108 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 SNAI2O43623 268 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 C1QBP02746 253 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 RAB5CP51148 216 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 UBE2D3P61077 147 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 UBE2D2P62837 147 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 RMI2Q96E14 147 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 MANBALQ9NQG1 85 aa10.49□□□□□ -0.73
VRK3-221ENST00000600284 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
VRK3-221ENST00000600284 RPL19P84098 196 aaKnown RBP10.48□□□□□ -0.73
VRK3-221ENST00000600284 ELOBQ15370 118 aa10.48□□□□□ -0.73
VRK3-221ENST00000600284 EIF5AL1Q6IS14 154 aaKnown RBP10.48□□□□□ -0.73
VRK3-221ENST00000600284 RPL35P42766 123 aaKnown RBP10.47□□□□□ -0.73
VRK3-221ENST00000600284 Q5VSD8 79 aa10.47□□□□□ -0.73
VRK3-221ENST00000600284 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
VRK3-221ENST00000600284 KCNIP4Q6PIL6 250 aa10.47□□□□□ -0.73
VRK3-221ENST00000600284 OR10AG1Q8NH19 301 aa10.47□□□□□ -0.73
VRK3-221ENST00000600284 C11orf52Q96A22 123 aa10.47□□□□□ -0.73
VRK3-221ENST00000600284 A0A087WX48 190 aa10.46□□□□□ -0.73
VRK3-221ENST00000600284 TEX46H3BTG2 121 aa10.46□□□□□ -0.73
VRK3-221ENST00000600284 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.73
VRK3-221ENST00000600284 SPANXN1Q5VSR9 72 aa10.46□□□□□ -0.73
VRK3-221ENST00000600284 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.46□□□□□ -0.73
VRK3-221ENST00000600284 VPS13BQ7Z7G8 4022 aa10.46□□□□□ -0.73
VRK3-221ENST00000600284 FAT1Q14517 4588 aa10.45□□□□□ -0.74
VRK3-221ENST00000600284 CCL20P78556 96 aa10.45□□□□□ -0.74
VRK3-221ENST00000600284 WFDC2Q14508 124 aa10.45□□□□□ -0.74
VRK3-221ENST00000600284 ZNF56Q15929 161 aa10.45□□□□□ -0.74
VRK3-221ENST00000600284 GNG13Q9P2W3 67 aa10.45□□□□□ -0.74
VRK3-221ENST00000600284 KLK12Q9UKR0 248 aa10.45□□□□□ -0.74
VRK3-221ENST00000600284 TRBV6-8A0A0A6YYG3 113 aa10.44□□□□□ -0.74
VRK3-221ENST00000600284 FAM229AH3BQW9 127 aa10.44□□□□□ -0.74
VRK3-221ENST00000600284 Q0VG73 95 aa10.44□□□□□ -0.74
VRK3-221ENST00000600284 Q8N976 141 aa10.44□□□□□ -0.74
VRK3-221ENST00000600284 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
VRK3-221ENST00000600284 SMIM12Q96EX1 92 aa10.44□□□□□ -0.74
VRK3-221ENST00000600284 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 SMR3BP02814 79 aaPredicted RBP10.43□□□□□ -0.74
VRK3-221ENST00000600284 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 SULT1A2P50226 295 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
VRK3-221ENST00000600284 PKIAP61925 76 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 TMEM97Q5BJF2 176 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 ATRAIDQ6UW56 229 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 BAALCQ8WXS3 180 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 DAZAP1Q96EP5 407 aaKnown RBP10.43□□□□□ -0.74
VRK3-221ENST00000600284 DERL1Q9BUN8 251 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
VRK3-221ENST00000600284 F5H697 171 aa10.42□□□□□ -0.74
VRK3-221ENST00000600284 PDE6DO43924 150 aa10.42□□□□□ -0.74
VRK3-221ENST00000600284 TCTE3Q8IZS6 198 aa10.42□□□□□ -0.74
VRK3-221ENST00000600284 UBE2WQ96B02 151 aa10.42□□□□□ -0.74
VRK3-221ENST00000600284 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
VRK3-221ENST00000600284 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms