RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NXT2Q9NPJ8 142 aaKnown RBP8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 NBPF19A0A087WUL8 3843 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 A0A1W2PPM0 123 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 K7EP34 96 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 PRM2P04554 102 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 U3KQK5 164 aa8.69□□□□□ -1.02
ARHGEF1-220ENST00000600274 A0A1B0GV72 72 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 APOMO95445 188 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 IGKCP01834 107 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 DSCR9P59020 149 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 A0A1B0GWB2 263 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 DPF1Q92782 380 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 IGHV3-73A0A0B4J1V6 119 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 HOXD3P31249 432 aaPredicted RBP8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 CRYBA4P53673 196 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 WFDC2Q14508 124 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 C3orf56Q8N813 242 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 MRPL35Q9NZE8 188 aaKnown RBP8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 VPREB3Q9UKI3 123 aa8.68□□□□□ -1.02
ARHGEF1-220ENST00000600274 SNRPD3P62318 126 aaKnown RBP8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 COX8CQ7Z4L0 72 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 ZNF479Q96JC4 524 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 KNCNA6PVL3 124 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 IGHV4-31P0DP07 118 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 PSMB8P28062 276 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 LAGE3Q14657 143 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 OR9G4Q8NGQ1 327 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 MRPL53Q96EL3 112 aaKnown RBP8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 ZNF256Q9Y2P7 627 aaPredicted RBP8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 GATA3P23771 443 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
ARHGEF1-220ENST00000600274 ZNF469Q96JG9 3925 aaPredicted RBP8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 J3QR89 54 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 SOCS3O14543 225 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 LGALS9BQ3B8N2 356 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 LGALS9CQ6DKI2 356 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 TENM4Q6N022 2769 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 DPM2O94777 84 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 SCGB1C2P0DMR2 95 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 ZNF56Q15929 161 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 TCTEX1D4Q5JR98 221 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 H3BUA1 57 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 BOD1L2Q8IYS8 172 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 Q8N8P6 123 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 SCGB3A1Q96QR1 104 aa8.66□□□□□ -1.02
ARHGEF1-220ENST00000600274 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.02
ARHGEF1-220ENST00000600274 CRIP2P52943 208 aaPredicted RBP8.65□□□□□ -1.02
ARHGEF1-220ENST00000600274 DEFB113Q30KQ7 82 aa8.65□□□□□ -1.02
ARHGEF1-220ENST00000600274 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
ARHGEF1-220ENST00000600274 DPH3P1Q9H4G8 78 aa8.65□□□□□ -1.02
ARHGEF1-220ENST00000600274 MDFICQ9P1T7 246 aa8.65□□□□□ -1.02
ARHGEF1-220ENST00000600274 TRBV25-1A0A075B6N4 114 aa8.65□□□□□ -1.03
ARHGEF1-220ENST00000600274 CNFNQ9BYD5 112 aa8.65□□□□□ -1.03
ARHGEF1-220ENST00000600274 DEFB131AP59861 70 aa8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 SUMO2P61956 95 aaKnown RBP8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 NRACQ8N912 160 aa8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 OR11H1Q8NG94 326 aa8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 CD300EQ496F6 205 aaPredicted RBP8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 DCANP1Q8TF63 244 aa8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 RNASE3P12724 160 aaKnown RBP8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
ARHGEF1-220ENST00000600274 MUC4Q99102 2169 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 INSL3P51460 131 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 KLHL30-AS1Q8NEE0 82 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 DYNLRB2Q8TF09 96 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 RASL10AQ92737 203 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 PSMB2P49721 201 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 ODF1Q14990 250 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 OR5A1Q8NGJ0 315 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 G3V4G9 280 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 FGF6P10767 208 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 CFHR3Q02985 330 aa8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
ARHGEF1-220ENST00000600274 SRSF2Q01130 221 aaKnown RBP8.62□□□□□ -1.03
ARHGEF1-220ENST00000600274 APRG1Q8IVJ8 170 aa8.62□□□□□ -1.03
ARHGEF1-220ENST00000600274 ZNF702PQ9H963 129 aa8.62□□□□□ -1.03
ARHGEF1-220ENST00000600274 IGHV3-64A0A075B6Q5 118 aa8.62□□□□□ -1.03
ARHGEF1-220ENST00000600274 LGALS1P09382 135 aaKnown RBP8.62□□□□□ -1.03
ARHGEF1-220ENST00000600274 ATP6V0BQ99437 205 aa8.62□□□□□ -1.03
ARHGEF1-220ENST00000600274 KLK9Q2XQG4 91 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 Q8N1Y9 231 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 MAPKAPK5-AS1Q8N8E1 139 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 LENEPQ9Y5L5 61 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 GAGE12HA6NDE8 117 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 ATP5LO75964 103 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 C2orf66Q6UXQ4 117 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 UNC79Q9P2D8 2635 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 RPL39P62891 51 aaKnown RBP8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 GAGE13Q4V321 117 aa8.61□□□□□ -1.03
ARHGEF1-220ENST00000600274 J3QLI3 93 aa8.6□□□□□ -1.03
ARHGEF1-220ENST00000600274 ZNF876PQ49A33 203 aa8.6□□□□□ -1.03
ARHGEF1-220ENST00000600274 Q6YL49 198 aa8.6□□□□□ -1.03
ARHGEF1-220ENST00000600274 A0A096LNT2 108 aa8.6□□□□□ -1.03
ARHGEF1-220ENST00000600274 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms