RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 K7EQD1 137 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 KRTAP10-2P60368 255 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 KCNIP4Q6PIL6 250 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 FAM231DQ6ZW35 169 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 NDFIP1Q9BT67 221 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 MDFICQ9P1T7 246 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 URGCP-MRPS24S4R325 110 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 TRAV4A0A0B4J268 109 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 LTAP01374 205 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 GYPEP15421 78 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 EVI2AP22794 236 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 GNG5P63218 68 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 TDRG1Q3Y452 100 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 CDPF1Q6NVV7 123 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 SH2D6Q7Z4S9 175 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 Q8N1X5 172 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 OR4C5Q8NGB2 326 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 ZNF479Q96JC4 524 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 KCNS1Q96KK3 526 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 MLST8Q9BVC4 326 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 PGPEP1Q9NXJ5 209 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 IL36BQ9NZH7 164 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 V9GYV3 84 aa7.82□□□□□ -1.16
HIF3A-217ENST00000600236 FBLL1A6NHQ2 334 aaKnown RBP7.81□□□□□ -1.16
HIF3A-217ENST00000600236 M0R2P5 195 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 UBE2G1P62253 170 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 Q6ZRN7 208 aaPredicted RBP7.81□□□□□ -1.16
HIF3A-217ENST00000600236 GOLT1AQ6ZVE7 132 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 Q86TA4 180 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 BAGE2Q86Y30 109 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 C10orf126Q8N4M7 172 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 TMEM75Q8N9X5 138 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 BIN3Q9NQY0 253 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 PKD1P98161 4303 aa7.81□□□□□ -1.16
HIF3A-217ENST00000600236 RYR1P21817 5038 aa7.8□□□□□ -1.16
HIF3A-217ENST00000600236 K7EQM0 130 aa7.8□□□□□ -1.16
HIF3A-217ENST00000600236 PHOX2AO14813 284 aa7.8□□□□□ -1.16
HIF3A-217ENST00000600236 IGLV2-11P01706 119 aa7.8□□□□□ -1.16
HIF3A-217ENST00000600236 RPS10P46783 165 aaKnown RBP7.8□□□□□ -1.16
HIF3A-217ENST00000600236 SCRT2Q9NQ03 307 aa7.8□□□□□ -1.16
HIF3A-217ENST00000600236 TRAV34A0A0B4J273 112 aa7.79□□□□□ -1.16
HIF3A-217ENST00000600236 IGHV3-16A0A0C4DH30 117 aa7.79□□□□□ -1.16
HIF3A-217ENST00000600236 CIDEAO60543 219 aa7.79□□□□□ -1.16
HIF3A-217ENST00000600236 CT83Q5H943 113 aa7.79□□□□□ -1.16
HIF3A-217ENST00000600236 COX8CQ7Z4L0 72 aa7.79□□□□□ -1.16
HIF3A-217ENST00000600236 NHLRC2Q8NBF2 726 aa7.79□□□□□ -1.16
HIF3A-217ENST00000600236 MSRB1Q9NZV6 116 aa7.79□□□□□ -1.16
HIF3A-217ENST00000600236 TRAV8-1A0A0A6YYK1 113 aa7.78□□□□□ -1.16
HIF3A-217ENST00000600236 C19orf71A6NCJ1 209 aa7.78□□□□□ -1.16
HIF3A-217ENST00000600236 GNRH2O43555 120 aa7.78□□□□□ -1.16
HIF3A-217ENST00000600236 DNAH10OSP0CZ25 163 aa7.78□□□□□ -1.16
HIF3A-217ENST00000600236 MGST1P10620 155 aaKnown RBP7.78□□□□□ -1.16
HIF3A-217ENST00000600236 WFDC10BQ8IUB3 73 aa7.78□□□□□ -1.16
HIF3A-217ENST00000600236 ZFP30Q9Y2G7 519 aa7.78□□□□□ -1.16
HIF3A-217ENST00000600236 MUC4Q99102 2169 aa7.78□□□□□ -1.16
HIF3A-217ENST00000600236 A0A087WTM6 91 aa7.77□□□□□ -1.17
HIF3A-217ENST00000600236 SMIM27A0A1W2PRY6 76 aa7.77□□□□□ -1.17
HIF3A-217ENST00000600236 CRYGDP07320 174 aa7.77□□□□□ -1.17
HIF3A-217ENST00000600236 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
HIF3A-217ENST00000600236 RNASE7Q9H1E1 156 aaKnown RBP7.77□□□□□ -1.17
HIF3A-217ENST00000600236 LRP1BQ9NZR2 4599 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 TRAV8-6A0A0B4J262 113 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 C5orf52A6NGY3 159 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 GATCO43716 136 aaKnown RBP7.76□□□□□ -1.17
HIF3A-217ENST00000600236 TRGC2P03986 189 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 GATA1P15976 413 aaPredicted RBP7.76□□□□□ -1.17
HIF3A-217ENST00000600236 TIRAPP58753 221 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 RPL19P84098 196 aaKnown RBP7.76□□□□□ -1.17
HIF3A-217ENST00000600236 RHOHQ15669 191 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 ZNF876PQ49A33 203 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 COX19Q49B96 90 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 NUDT10Q8NFP7 164 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 NUDT11Q96G61 164 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 TNFRSF18Q9Y5U5 241 aa7.76□□□□□ -1.17
HIF3A-217ENST00000600236 IGHV3-38A0A0C4DH36 116 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 FAM231BA6NCW3 169 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 EPM2AB3EWF7 344 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 PSCAO43653 123 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 SMUG1Q53HV7 270 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
HIF3A-217ENST00000600236 TSKUQ8WUA8 353 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 SGK494Q96LW2 274 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
HIF3A-217ENST00000600236 HSPG2P98160 4391 aa7.75□□□□□ -1.17
HIF3A-217ENST00000600236 LOC100131303A0A0U1RQF7 123 aa7.74□□□□□ -1.17
HIF3A-217ENST00000600236 TRBV6-4A0A1B0GX49 114 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms