RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SPANXN1Q5VSR9 72 aa13.21□□□□□ -0.29
CCDC9-205ENST00000600117 UFSP1Q6NVU6 142 aa13.21□□□□□ -0.29
CCDC9-205ENST00000600117 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
CCDC9-205ENST00000600117 CACNG7P62955 275 aa13.2□□□□□ -0.3
CCDC9-205ENST00000600117 RNF212Q495C1 297 aa13.2□□□□□ -0.3
CCDC9-205ENST00000600117 WDR73Q6P4I2 378 aa13.2□□□□□ -0.3
CCDC9-205ENST00000600117 SLC7A5P1Q8MH63 180 aa13.2□□□□□ -0.3
CCDC9-205ENST00000600117 SAMD10Q9BYL1 202 aa13.2□□□□□ -0.3
CCDC9-205ENST00000600117 HIGD1CA8MV81 97 aa13.19□□□□□ -0.3
CCDC9-205ENST00000600117 CRYGDP07320 174 aa13.19□□□□□ -0.3
CCDC9-205ENST00000600117 SSTP61278 116 aa13.19□□□□□ -0.3
CCDC9-205ENST00000600117 TMEM88Q6PEY1 159 aa13.19□□□□□ -0.3
CCDC9-205ENST00000600117 FAM210BQ96KR6 192 aa13.19□□□□□ -0.3
CCDC9-205ENST00000600117 PGLYRP4Q96LB8 373 aa13.19□□□□□ -0.3
CCDC9-205ENST00000600117 MSRB1Q9NZV6 116 aa13.19□□□□□ -0.3
CCDC9-205ENST00000600117 KLK5Q9Y337 293 aaPredicted RBP13.19□□□□□ -0.3
CCDC9-205ENST00000600117 SMIM27A0A1W2PRY6 76 aa13.18□□□□□ -0.3
CCDC9-205ENST00000600117 IGLL5B9A064 214 aa13.18□□□□□ -0.3
CCDC9-205ENST00000600117 PPP1R2P9O14990 202 aa13.18□□□□□ -0.3
CCDC9-205ENST00000600117 CIDEAO60543 219 aa13.18□□□□□ -0.3
CCDC9-205ENST00000600117 MT-ND4LP03901 98 aa13.17□□□□□ -0.3
CCDC9-205ENST00000600117 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
CCDC9-205ENST00000600117 ZFP2Q6ZN57 461 aa13.17□□□□□ -0.3
CCDC9-205ENST00000600117 ANAPC16Q96DE5 110 aa13.17□□□□□ -0.3
CCDC9-205ENST00000600117 VSIG2Q96IQ7 327 aa13.17□□□□□ -0.3
CCDC9-205ENST00000600117 ABCA13Q86UQ4 5058 aa13.17□□□□□ -0.3
CCDC9-205ENST00000600117 FAT2Q9NYQ8 4349 aa13.17□□□□□ -0.3
CCDC9-205ENST00000600117 TRAV26-1A0A087WT03 109 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 A0A087WWL8 130 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 IGHV3-73A0A0B4J1V6 119 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 TRGV4A0A0C4DH28 118 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 NTF3P20783 257 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 CRYBA4P53673 196 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 NDUFA5Q16718 116 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 NUP35Q8NFH5 326 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 PRO0255Q9UI72 69 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 KIF25-AS1Q9Y6Z4 181 aa13.16□□□□□ -0.3
CCDC9-205ENST00000600117 DNAH17Q9UFH2 4485 aa13.15□□□□□ -0.3
CCDC9-205ENST00000600117 A0A0J9YY99 117 aa13.15□□□□□ -0.3
CCDC9-205ENST00000600117 RHODO00212 210 aa13.15□□□□□ -0.3
CCDC9-205ENST00000600117 SLAQ13239 276 aa13.15□□□□□ -0.3
CCDC9-205ENST00000600117 Q6ZSN1 163 aa13.15□□□□□ -0.3
CCDC9-205ENST00000600117 AP1S3Q96PC3 154 aa13.15□□□□□ -0.3
CCDC9-205ENST00000600117 HHLA3Q9XRX5 114 aa13.15□□□□□ -0.3
CCDC9-205ENST00000600117 H3BNG1 76 aa13.14□□□□□ -0.31
CCDC9-205ENST00000600117 LINC00315P59091 139 aa13.14□□□□□ -0.31
CCDC9-205ENST00000600117 FAM74A4Q5TZK3 123 aa13.14□□□□□ -0.31
CCDC9-205ENST00000600117 C14orf178Q8N769 122 aaPredicted RBP13.14□□□□□ -0.31
CCDC9-205ENST00000600117 NAT8BQ9UHF3 227 aa13.14□□□□□ -0.31
CCDC9-205ENST00000600117 DNAH2Q9P225 4427 aa13.14□□□□□ -0.31
CCDC9-205ENST00000600117 A0A1B0GUT8 65 aa13.13□□□□□ -0.31
CCDC9-205ENST00000600117 TCTAP57738 103 aa13.13□□□□□ -0.31
CCDC9-205ENST00000600117 TWIST1Q15672 202 aa13.13□□□□□ -0.31
CCDC9-205ENST00000600117 CLRN3Q8NCR9 226 aa13.13□□□□□ -0.31
CCDC9-205ENST00000600117 PAX4O43316 350 aa13.12□□□□□ -0.31
CCDC9-205ENST00000600117 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
CCDC9-205ENST00000600117 EVI2AP22794 236 aa13.12□□□□□ -0.31
CCDC9-205ENST00000600117 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
CCDC9-205ENST00000600117 TRBV6-4A0A1B0GX49 114 aa13.11□□□□□ -0.31
CCDC9-205ENST00000600117 C7orf77A4D0Y5 90 aa13.11□□□□□ -0.31
CCDC9-205ENST00000600117 APOC3P02656 99 aa13.11□□□□□ -0.31
CCDC9-205ENST00000600117 SLC25A29Q8N8R3 303 aa13.11□□□□□ -0.31
CCDC9-205ENST00000600117 C15orf53Q8NAA6 179 aa13.11□□□□□ -0.31
CCDC9-205ENST00000600117 BORCS7Q96B45 105 aa13.11□□□□□ -0.31
CCDC9-205ENST00000600117 CTDSP1Q9GZU7 261 aa13.11□□□□□ -0.31
CCDC9-205ENST00000600117 LGALS9CQ6DKI2 356 aa13.1□□□□□ -0.31
CCDC9-205ENST00000600117 LOC100131303A0A0U1RQF7 123 aa13.09□□□□□ -0.31
CCDC9-205ENST00000600117 SMIM17P0DL12 118 aa13.09□□□□□ -0.31
CCDC9-205ENST00000600117 FAM3BP58499 235 aaPredicted RBP13.09□□□□□ -0.31
CCDC9-205ENST00000600117 RIGQ13278 110 aa13.09□□□□□ -0.31
CCDC9-205ENST00000600117 RHEBQ15382 184 aa13.09□□□□□ -0.31
CCDC9-205ENST00000600117 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
CCDC9-205ENST00000600117 DNAH11Q96DT5 4516 aa13.09□□□□□ -0.31
CCDC9-205ENST00000600117 A0A087WWC5 75 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 A0A096LPF7 62 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 K7EQD1 137 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 NUDT3O95989 172 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 RAB4BP61018 213 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 RHOHQ15669 191 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 ZNF56Q15929 161 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 SVBPQ8N300 66 aa13.08□□□□□ -0.32
CCDC9-205ENST00000600117 A0A1B0GXF2 115 aa13.07□□□□□ -0.32
CCDC9-205ENST00000600117 GYPEP15421 78 aa13.07□□□□□ -0.32
CCDC9-205ENST00000600117 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
CCDC9-205ENST00000600117 Q9UF83 564 aa13.07□□□□□ -0.32
CCDC9-205ENST00000600117 SNAPINO95295 136 aa13.06□□□□□ -0.32
CCDC9-205ENST00000600117 MGPP08493 103 aa13.06□□□□□ -0.32
CCDC9-205ENST00000600117 PRADC1Q9BSG0 188 aa13.06□□□□□ -0.32
CCDC9-205ENST00000600117 TMEM191AQ9H0A3 160 aa13.06□□□□□ -0.32
CCDC9-205ENST00000600117 RPS10P5Q9NQ39 176 aa13.06□□□□□ -0.32
CCDC9-205ENST00000600117 TMEM242Q9NWH2 141 aa13.06□□□□□ -0.32
CCDC9-205ENST00000600117 ICOSQ9Y6W8 199 aa13.06□□□□□ -0.32
CCDC9-205ENST00000600117 P0DMU3 169 aa13.05□□□□□ -0.32
CCDC9-205ENST00000600117 FAM231AP0DMU4 169 aa13.05□□□□□ -0.32
CCDC9-205ENST00000600117 FAM231CP0DMU5 169 aa13.05□□□□□ -0.32
CCDC9-205ENST00000600117 LINC00694P0DN24 101 aa13.05□□□□□ -0.32
CCDC9-205ENST00000600117 MRPL23Q16540 153 aaKnown RBP13.05□□□□□ -0.32
CCDC9-205ENST00000600117 MRPL54Q6P161 138 aaKnown RBP13.05□□□□□ -0.32
CCDC9-205ENST00000600117 SMIM15Q7Z3B0 74 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms