RNA–Protein interactions for RNA: ENST00000599339.1

EBI3-202, Transcript of Epstein-Barr virus induced 3, humanhuman

TSL 2

Gene EBI3, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-202ENST00000599339 ELOBQ15370 118 aa9.65□□□□□ -0.86
EBI3-202ENST00000599339 AKR1C8PQ5T2L2 129 aa9.65□□□□□ -0.86
EBI3-202ENST00000599339 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
EBI3-202ENST00000599339 Q8N976 141 aa9.65□□□□□ -0.86
EBI3-202ENST00000599339 BAALCQ8WXS3 180 aa9.65□□□□□ -0.86
EBI3-202ENST00000599339 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
EBI3-202ENST00000599339 IGKV2D-24A0A075B6R9 120 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 A0A087WX48 190 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 FXYD6-FXYD2A0A087WZ82 144 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 FAM74A7A6NL05 159 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 KRBOX1C9JBD0 128 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 FAM162BQ5T6X4 162 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 NIT1Q86X76 327 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 ZC2HC1AQ96GY0 325 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 Q9UF83 564 aa9.64□□□□□ -0.87
EBI3-202ENST00000599339 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 GRIFINA4D1Z8 144 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 SH2D1AO60880 128 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 Q5BKY6 102 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 TCEAL7Q9BRU2 100 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 KLK12Q9UKR0 248 aa9.63□□□□□ -0.87
EBI3-202ENST00000599339 A0A087WWL8 130 aa9.62□□□□□ -0.87
EBI3-202ENST00000599339 RNF222A6NCQ9 220 aa9.62□□□□□ -0.87
EBI3-202ENST00000599339 M0R381 172 aa9.62□□□□□ -0.87
EBI3-202ENST00000599339 CRIP1P50238 77 aa9.62□□□□□ -0.87
EBI3-202ENST00000599339 RPL36AP83881 106 aaKnown RBP9.62□□□□□ -0.87
EBI3-202ENST00000599339 RPL36ALQ969Q0 106 aaKnown RBP9.62□□□□□ -0.87
EBI3-202ENST00000599339 UBE2WQ96B02 151 aa9.62□□□□□ -0.87
EBI3-202ENST00000599339 MAP1LC3B2A6NCE7 125 aa9.61□□□□□ -0.87
EBI3-202ENST00000599339 Q0VG73 95 aa9.61□□□□□ -0.87
EBI3-202ENST00000599339 ZNF674Q2M3X9 581 aa9.61□□□□□ -0.87
EBI3-202ENST00000599339 LINC01559Q495D7 138 aa9.61□□□□□ -0.87
EBI3-202ENST00000599339 STOML3Q8TAV4 291 aa9.61□□□□□ -0.87
EBI3-202ENST00000599339 MAP1LC3BQ9GZQ8 125 aa9.61□□□□□ -0.87
EBI3-202ENST00000599339 DNAH8Q96JB1 4490 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 TMSB15BA0A087X1C1 80 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 AKR1C3P42330 323 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 FHITP49789 147 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 CST9LP1Q5W188 147 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 BATF3Q9NR55 127 aa9.6□□□□□ -0.87
EBI3-202ENST00000599339 TRBV7-3A0A075B6L6 115 aa9.59□□□□□ -0.87
EBI3-202ENST00000599339 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
EBI3-202ENST00000599339 LTAP01374 205 aa9.59□□□□□ -0.87
EBI3-202ENST00000599339 UBE2D3P61077 147 aa9.59□□□□□ -0.87
EBI3-202ENST00000599339 UBE2D2P62837 147 aa9.59□□□□□ -0.87
EBI3-202ENST00000599339 LINC01620Q4KN68 170 aa9.59□□□□□ -0.87
EBI3-202ENST00000599339 C14orf177Q52M58 125 aa9.59□□□□□ -0.87
EBI3-202ENST00000599339 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.59□□□□□ -0.87
EBI3-202ENST00000599339 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
EBI3-202ENST00000599339 CRPP02741 224 aa9.58□□□□□ -0.88
EBI3-202ENST00000599339 ATRAIDQ6UW56 229 aa9.58□□□□□ -0.88
EBI3-202ENST00000599339 CHAC1Q9BUX1 264 aa9.58□□□□□ -0.88
EBI3-202ENST00000599339 C1orf43Q9BWL3 253 aa9.58□□□□□ -0.88
EBI3-202ENST00000599339 PKIAP61925 76 aa9.57□□□□□ -0.88
EBI3-202ENST00000599339 OR10G8Q8NGN5 311 aa9.57□□□□□ -0.88
EBI3-202ENST00000599339 DNAJC30Q96LL9 226 aa9.57□□□□□ -0.88
EBI3-202ENST00000599339 TRBV6-8A0A0A6YYG3 113 aa9.56□□□□□ -0.88
EBI3-202ENST00000599339 S100A9P06702 114 aaKnown RBP9.56□□□□□ -0.88
EBI3-202ENST00000599339 RAB4BP61018 213 aa9.56□□□□□ -0.88
EBI3-202ENST00000599339 ZNF56Q15929 161 aa9.56□□□□□ -0.88
EBI3-202ENST00000599339 ZNF471Q9BX82 626 aaPredicted RBP9.56□□□□□ -0.88
EBI3-202ENST00000599339 ARPC5O15511 151 aa9.55□□□□□ -0.88
EBI3-202ENST00000599339 CXCL1P09341 107 aa9.55□□□□□ -0.88
EBI3-202ENST00000599339 PAGE4O60829 102 aa9.54□□□□□ -0.88
EBI3-202ENST00000599339 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
EBI3-202ENST00000599339 C15orf54Q8N8G6 183 aa9.54□□□□□ -0.88
EBI3-202ENST00000599339 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
EBI3-202ENST00000599339 PFDN1O60925 122 aa9.53□□□□□ -0.88
EBI3-202ENST00000599339 IGLV2-8P01709 118 aa9.53□□□□□ -0.88
EBI3-202ENST00000599339 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
EBI3-202ENST00000599339 SPANXN1Q5VSR9 72 aa9.53□□□□□ -0.88
EBI3-202ENST00000599339 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
EBI3-202ENST00000599339 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
EBI3-202ENST00000599339 CHCHD5Q9BSY4 110 aa9.53□□□□□ -0.88
EBI3-202ENST00000599339 CYTL1Q9NRR1 136 aa9.53□□□□□ -0.88
EBI3-202ENST00000599339 F5H697 171 aa9.52□□□□□ -0.89
EBI3-202ENST00000599339 MIAQ16674 131 aa9.52□□□□□ -0.89
EBI3-202ENST00000599339 MPV17L2Q567V2 206 aa9.52□□□□□ -0.89
EBI3-202ENST00000599339 PRR27Q6MZM9 219 aa9.52□□□□□ -0.89
EBI3-202ENST00000599339 ENHOQ6UWT2 76 aa9.52□□□□□ -0.89
EBI3-202ENST00000599339 SFT2D1Q8WV19 159 aa9.52□□□□□ -0.89
EBI3-202ENST00000599339 UMAD1C9J7I0 102 aa9.51□□□□□ -0.89
EBI3-202ENST00000599339 SNAI2O43623 268 aa9.51□□□□□ -0.89
EBI3-202ENST00000599339 HLA-DQA1P01909 254 aa9.51□□□□□ -0.89
EBI3-202ENST00000599339 OR5AL1P0C617 328 aa9.51□□□□□ -0.89
EBI3-202ENST00000599339 SMIM17P0DL12 118 aa9.51□□□□□ -0.89
EBI3-202ENST00000599339 RPL19P84098 196 aaKnown RBP9.51□□□□□ -0.89
EBI3-202ENST00000599339 BAGE2Q86Y30 109 aa9.51□□□□□ -0.89
EBI3-202ENST00000599339 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
EBI3-202ENST00000599339 G3V3Q6 166 aa9.5□□□□□ -0.89
EBI3-202ENST00000599339 OXTP01178 125 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms