RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 SH2D6Q7Z4S9 175 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 OR8B3Q8NGG8 313 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 CDC42BPBQ9Y5S2 1711 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 PRR14LQ5THK1 2151 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 TOP2BQ02880 1626 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 MEGF6O75095 1541 aa3.29□□□□□ -1.88
PAF1-208ENST00000598594 TRAV13-2A0A0B4J235 113 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 TRAV10A0A0B4J240 114 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 A0A0J9YX75 114 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 TRBV10-3A0A0K0K1G6 114 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 MUC21A0A140T8X8 626 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 NDUFC1O43677 76 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 ERC2-IT1O76042 136 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 IGKV3-11P04433 115 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 MIR22HGQ0VDD5 57 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 DEFB113Q30KQ7 82 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 CYSTM1Q9H1C7 97 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 SMAD5-AS1Q9Y6J3 95 aa3.28□□□□□ -1.88
PAF1-208ENST00000598594 CDK13Q14004 1512 aaKnown RBP3.28□□□□□ -1.88
PAF1-208ENST00000598594 MPDZO75970 2070 aa3.28□□□□□ -1.89
PAF1-208ENST00000598594 BLMP54132 1417 aaPredicted RBP3.27□□□□□ -1.89
PAF1-208ENST00000598594 IGKV3D-11A0A0A0MRZ8 115 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 KANTRA0A1W2PQU2 76 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 HCG22E2RYF7 251 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 ASAH2BP0C7U1 165 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 MIFP14174 115 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 MRPS21P82921 87 aaKnown RBP3.27□□□□□ -1.89
PAF1-208ENST00000598594 MPV17LQ2QL34 196 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 C14orf177Q52M58 125 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 Q8TAT8 98 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 VOPP1Q96AW1 172 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 EFCAB5A4FU69 1503 aa3.27□□□□□ -1.89
PAF1-208ENST00000598594 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.27□□□□□ -1.89
PAF1-208ENST00000598594 COL5A3P25940 1745 aaPredicted RBP3.27□□□□□ -1.89
PAF1-208ENST00000598594 RAPGEF6Q8TEU7 1601 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 DOCK11Q5JSL3 2073 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 UNC13BO14795 1591 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 TIAM1Q13009 1591 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 IGLV2-18A0A075B6J9 118 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 TCRBV4S1A1TA0A5B7 111 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 CYP4F30PQ9H0H9 118 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 PRO0461Q9UI25 63 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 KLK12Q9UKR0 248 aa3.26□□□□□ -1.89
PAF1-208ENST00000598594 COL2A1P02458 1487 aaPredicted RBP3.26□□□□□ -1.89
PAF1-208ENST00000598594 AFDNP55196 1824 aaKnown RBP3.26□□□□□ -1.89
PAF1-208ENST00000598594 IGHV3OR16-8A0A075B7F1 116 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 A0A087WYN8 130 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 ODF3BA8MYP8 253 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 TFF1P04155 84 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 P0C880 135 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 KPRPQ5T749 579 aaPredicted RBP3.25□□□□□ -1.89
PAF1-208ENST00000598594 CYP2G1PQ6ZSU1 146 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 Q8N9P0 234 aaPredicted RBP3.25□□□□□ -1.89
PAF1-208ENST00000598594 C18orf32Q8TCD1 76 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 RPS10P5Q9NQ39 176 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 HIGD1BQ9P298 99 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 S4R3C0 116 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 ZGRF1Q86YA3 2104 aa3.25□□□□□ -1.89
PAF1-208ENST00000598594 MYOFQ9NZM1 2061 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 ABCC1P33527 1531 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 DUOX2Q9NRD8 1548 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 KIF1AQ12756 1690 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 CXCL8P10145 99 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 PMCHL1Q16048 86 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 KRTAP7-1Q8IUC3 87 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 HEATR1Q9H583 2144 aaKnown RBP3.24□□□□□ -1.89
PAF1-208ENST00000598594 MANBALQ9NQG1 85 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 A0A1B0GUL6 1792 aa3.24□□□□□ -1.89
PAF1-208ENST00000598594 KDM6BO15054 1643 aa3.23□□□□□ -1.89
PAF1-208ENST00000598594 SIX6O95475 246 aa3.23□□□□□ -1.89
PAF1-208ENST00000598594 ZNF791Q3KP31 576 aaPredicted RBP3.23□□□□□ -1.89
PAF1-208ENST00000598594 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
PAF1-208ENST00000598594 CLECL1Q8IZS7 167 aa3.23□□□□□ -1.89
PAF1-208ENST00000598594 GBF1Q92538 1859 aa3.23□□□□□ -1.89
PAF1-208ENST00000598594 COL4A6Q14031 1691 aa3.23□□□□□ -1.89
PAF1-208ENST00000598594 SIPA1L3O60292 1781 aaPredicted RBP3.23□□□□□ -1.89
PAF1-208ENST00000598594 COL16A1Q07092 1604 aaPredicted RBP3.22□□□□□ -1.89
PAF1-208ENST00000598594 NRXN1Q9ULB1 1477 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 ZNF318Q5VUA4 2279 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 FREM3P0C091 2139 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 TMSB15BA0A087X1C1 80 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 TRBV7-1A0A0A6YYK4 115 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 A0A0G2JND7 137 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 SNRPFP62306 86 aaKnown RBP3.22□□□□□ -1.89
PAF1-208ENST00000598594 ERHP84090 104 aaKnown RBP3.22□□□□□ -1.89
PAF1-208ENST00000598594 ZNF79Q15937 498 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 LINC00483Q53H64 154 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 C2orf82Q6UX34 121 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 ODF3Q96PU9 254 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 KCPQ6ZWJ8 1503 aa3.22□□□□□ -1.89
PAF1-208ENST00000598594 HEATR5BQ9P2D3 2071 aa3.21□□□□□ -1.89
PAF1-208ENST00000598594 IGLV3-16A0A075B6K0 115 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 C7orf77A4D0Y5 90 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 H7BZZ5 65 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 PSCAO43653 123 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 ZNF833PQ6ZTB9 187 aa3.21□□□□□ -1.9
PAF1-208ENST00000598594 HIGD2AQ9BW72 106 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms