RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 PLA2G1BP04054 148 aaKnown RBP6.92□□□□□ -1.3
LSM4-205ENST00000597776 TOR2AQ5JU69 321 aa6.92□□□□□ -1.3
LSM4-205ENST00000597776 NIT1Q86X76 327 aa6.92□□□□□ -1.3
LSM4-205ENST00000597776 SYT8Q8NBV8 401 aa6.92□□□□□ -1.3
LSM4-205ENST00000597776 INO80EQ8NBZ0 244 aaPredicted RBP6.92□□□□□ -1.3
LSM4-205ENST00000597776 OR11H4Q8NGC9 324 aa6.92□□□□□ -1.3
LSM4-205ENST00000597776 KLK12Q9UKR0 248 aa6.92□□□□□ -1.3
LSM4-205ENST00000597776 URGCP-MRPS24S4R325 110 aa6.92□□□□□ -1.3
LSM4-205ENST00000597776 BORCS7-ASMTA0A0B4J1R7 106 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 RBFOX3A6NFN3 312 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 M0R381 172 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 GIPP09681 153 aaPredicted RBP6.91□□□□□ -1.3
LSM4-205ENST00000597776 DNLZQ5SXM8 178 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 FAM162BQ5T6X4 162 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 SCXQ7RTU7 201 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 HIST1H2BAQ96A08 127 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 UBE2WQ96B02 151 aa6.91□□□□□ -1.3
LSM4-205ENST00000597776 PTTG1O95997 202 aa6.9□□□□□ -1.3
LSM4-205ENST00000597776 AKR1C8PQ5T2L2 129 aa6.9□□□□□ -1.3
LSM4-205ENST00000597776 RMI2Q96E14 147 aa6.9□□□□□ -1.3
LSM4-205ENST00000597776 SFRP2Q96HF1 295 aa6.9□□□□□ -1.3
LSM4-205ENST00000597776 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
LSM4-205ENST00000597776 COX11Q9Y6N1 276 aa6.9□□□□□ -1.3
LSM4-205ENST00000597776 LRP1Q07954 4544 aaKnown RBP6.89□□□□□ -1.31
LSM4-205ENST00000597776 A0A087WX48 190 aa6.89□□□□□ -1.31
LSM4-205ENST00000597776 MAP1LC3B2A6NCE7 125 aa6.89□□□□□ -1.31
LSM4-205ENST00000597776 TPT1P13693 172 aaKnown RBP6.89□□□□□ -1.31
LSM4-205ENST00000597776 COX8CQ7Z4L0 72 aa6.89□□□□□ -1.31
LSM4-205ENST00000597776 Q8N976 141 aa6.89□□□□□ -1.31
LSM4-205ENST00000597776 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
LSM4-205ENST00000597776 NKX6-2Q9C056 277 aaPredicted RBP6.89□□□□□ -1.31
LSM4-205ENST00000597776 MAP1LC3BQ9GZQ8 125 aa6.89□□□□□ -1.31
LSM4-205ENST00000597776 ZFP30Q9Y2G7 519 aa6.89□□□□□ -1.31
LSM4-205ENST00000597776 KRTAP29-1A8MX34 341 aaPredicted RBP6.88□□□□□ -1.31
LSM4-205ENST00000597776 UBE2D3P61077 147 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 UBE2G1P62253 170 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 UBE2D2P62837 147 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 ZNF674Q2M3X9 581 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 LINC01559Q495D7 138 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 CST9LP1Q5W188 147 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 ZFP82Q8N141 532 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 CHAC1Q9BUX1 264 aa6.88□□□□□ -1.31
LSM4-205ENST00000597776 TRBV7-3A0A075B6L6 115 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 TRBV10-1A0A0K0K1A3 114 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 G3V3Q6 166 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 LTAP01374 205 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 SEC11BP0C7V7 166 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 FHITP49789 147 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
LSM4-205ENST00000597776 RPL36AP83881 106 aaKnown RBP6.87□□□□□ -1.31
LSM4-205ENST00000597776 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
LSM4-205ENST00000597776 CIRBP-AS1Q8TBR5 109 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 RPL36ALQ969Q0 106 aaKnown RBP6.87□□□□□ -1.31
LSM4-205ENST00000597776 CYTL1Q9NRR1 136 aa6.87□□□□□ -1.31
LSM4-205ENST00000597776 FAT3Q8TDW7 4589 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 TRBV6-1A0A0K0K1D8 114 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 TMEM262E9PQX1 116 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 AKR1C3P42330 323 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 ELOBQ15370 118 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 KCNIP4Q6PIL6 250 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 ATRAIDQ6UW56 229 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 OR10AG1Q8NH19 301 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 CHCHD7Q9BUK0 85 aa6.86□□□□□ -1.31
LSM4-205ENST00000597776 TRBV6-8A0A0A6YYG3 113 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 MUC21A0A0G2JKD1 596 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 MUC21A0A140T8X8 626 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 ARPC5O15511 151 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 PAGE4O60829 102 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 ZNF56Q15929 161 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 MPV17L2Q567V2 206 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 ENHOQ6UWT2 76 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 NEXN-AS1Q8NBZ9 246 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 STOML3Q8TAV4 291 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 C1orf43Q9BWL3 253 aa6.85□□□□□ -1.31
LSM4-205ENST00000597776 A0A1B0GV50 99 aa6.84□□□□□ -1.31
LSM4-205ENST00000597776 SCO2A0A1W2PP80 73 aa6.84□□□□□ -1.31
LSM4-205ENST00000597776 RAB4BP61018 213 aa6.84□□□□□ -1.31
LSM4-205ENST00000597776 Q0VG73 95 aa6.84□□□□□ -1.31
LSM4-205ENST00000597776 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
LSM4-205ENST00000597776 TCEAL7Q9BRU2 100 aa6.84□□□□□ -1.31
LSM4-205ENST00000597776 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.32
LSM4-205ENST00000597776 HMCN2Q8NDA2 5059 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 USP17L23D6RBM5 183 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 SMLR1H3BR10 107 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 IGLV2-8P01709 118 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 HLA-DQA1P01909 254 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 CRPP02741 224 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 ANGP03950 147 aaKnown RBP6.83□□□□□ -1.32
LSM4-205ENST00000597776 SSTP61278 116 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 PRR27Q6MZM9 219 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 CLPSL2Q6UWE3 100 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 FAM213BQ8TBF2 198 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 CHCHD5Q9BSY4 110 aa6.83□□□□□ -1.32
LSM4-205ENST00000597776 ZNF471Q9BX82 626 aaPredicted RBP6.83□□□□□ -1.32
LSM4-205ENST00000597776 C14orf177Q52M58 125 aa6.82□□□□□ -1.32
LSM4-205ENST00000597776 NTM-AS1Q6ZSK4 140 aa6.82□□□□□ -1.32
LSM4-205ENST00000597776 SFT2D1Q8WV19 159 aa6.82□□□□□ -1.32
LSM4-205ENST00000597776 MLST8Q9BVC4 326 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms