RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 SAMD10Q9BYL1 202 aa5.84□□□□□ -1.47
VRK3-211ENST00000596445 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.48
VRK3-211ENST00000596445 A0A087WWL8 130 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 TRBV6-4A0A1B0GX49 114 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 HIGD1CA8MV81 97 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 NUDT3O95989 172 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 CRYGDP07320 174 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 ADCYAP1P18509 176 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 NTF3P20783 257 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 SSTP61278 116 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 FAM74A4Q5TZK3 123 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 AP1S3Q96PC3 154 aa5.83□□□□□ -1.48
VRK3-211ENST00000596445 SMIM27A0A1W2PRY6 76 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 TRGC1P0CF51 173 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 SMIM17P0DL12 118 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 P0DMU3 169 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 FAM231AP0DMU4 169 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 FAM231CP0DMU5 169 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 GYPEP15421 78 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 TWIST1Q15672 202 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 C10orf91Q5T1B1 145 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 LGALS9CQ6DKI2 356 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 Q6ZSN1 163 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
VRK3-211ENST00000596445 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 PGLYRP4Q96LB8 373 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 PRADC1Q9BSG0 188 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 MSRB1Q9NZV6 116 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 ICOSQ9Y6W8 199 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 KMT2AQ03164 3969 aa5.82□□□□□ -1.48
VRK3-211ENST00000596445 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 A0A096LPF7 62 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 LCE6AA0A183 80 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 A0A1B0GUT8 65 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 K7EQD1 137 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 MT-ND4LP03901 98 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 RAB4BP61018 213 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 RHOHQ15669 191 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 MRPL23Q16540 153 aaKnown RBP5.81□□□□□ -1.48
VRK3-211ENST00000596445 RNF212Q495C1 297 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 NUP35Q8NFH5 326 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 LINC00476Q8WZB0 136 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 BORCS7Q96B45 105 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 ANAPC16Q96DE5 110 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 NAT8BQ9UHF3 227 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 CARHSP1Q9Y2V2 147 aaKnown RBP5.81□□□□□ -1.48
VRK3-211ENST00000596445 KIF25-AS1Q9Y6Z4 181 aa5.81□□□□□ -1.48
VRK3-211ENST00000596445 LOC100131303A0A0U1RQF7 123 aa5.8□□□□□ -1.48
VRK3-211ENST00000596445 LY6G6CO95867 125 aa5.8□□□□□ -1.48
VRK3-211ENST00000596445 EVI2AP22794 236 aa5.8□□□□□ -1.48
VRK3-211ENST00000596445 LINC00315P59091 139 aa5.8□□□□□ -1.48
VRK3-211ENST00000596445 SMIM15Q7Z3B0 74 aa5.8□□□□□ -1.48
VRK3-211ENST00000596445 SH2D6Q7Z4S9 175 aa5.8□□□□□ -1.48
VRK3-211ENST00000596445 DPH3P1Q9H4G8 78 aa5.8□□□□□ -1.48
VRK3-211ENST00000596445 TRBV10-1A0A0K0K1A3 114 aa5.79□□□□□ -1.48
VRK3-211ENST00000596445 F5H697 171 aa5.79□□□□□ -1.48
VRK3-211ENST00000596445 SRIP30626 198 aa5.79□□□□□ -1.48
VRK3-211ENST00000596445 CCL18P55774 89 aa5.79□□□□□ -1.48
VRK3-211ENST00000596445 FAM3BP58499 235 aaPredicted RBP5.79□□□□□ -1.48
VRK3-211ENST00000596445 RIGQ13278 110 aa5.79□□□□□ -1.48
VRK3-211ENST00000596445 ZNF56Q15929 161 aa5.79□□□□□ -1.48
VRK3-211ENST00000596445 NEGR1Q7Z3B1 354 aa5.79□□□□□ -1.48
VRK3-211ENST00000596445 DNAH1Q9P2D7 4330 aa5.78□□□□□ -1.48
VRK3-211ENST00000596445 MGPP08493 103 aa5.78□□□□□ -1.48
VRK3-211ENST00000596445 ESRGQ1W209 222 aa5.78□□□□□ -1.48
VRK3-211ENST00000596445 UBE2DNLQ8IWF7 75 aa5.78□□□□□ -1.48
VRK3-211ENST00000596445 CTDSP1Q9GZU7 261 aa5.78□□□□□ -1.48
VRK3-211ENST00000596445 Q9UF83 564 aa5.78□□□□□ -1.48
VRK3-211ENST00000596445 VPS13DQ5THJ4 4388 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 TRBV7-3A0A075B6L6 115 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 A0A1B0GW15 77 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 GAGE12JA6NER3 117 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 H7C1H1 209 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 M0QY20 66 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 LINC00694P0DN24 101 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 RPL36AP83881 106 aaKnown RBP5.77□□□□□ -1.49
VRK3-211ENST00000596445 GAGE1Q13065 139 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 GAGE4Q13068 117 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 GAGE5Q13069 117 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 RHEBQ15382 184 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 NDUFA5Q16718 116 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 GAGE13Q4V321 117 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 SUMO4Q6EEV6 95 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 LYPD5Q6UWN5 251 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 SLC7A5P1Q8MH63 180 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 CLRN3Q8NCR9 226 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 RPL36ALQ969Q0 106 aaKnown RBP5.77□□□□□ -1.49
VRK3-211ENST00000596445 IMMP2LQ96T52 175 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 TMEM191AQ9H0A3 160 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 TMEM242Q9NWH2 141 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 LINC00588Q9Y4M8 146 aa5.77□□□□□ -1.49
VRK3-211ENST00000596445 SACSQ9NZJ4 4579 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 DNAH6Q9C0G6 4158 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 A0A087WWC5 75 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 C7orf77A4D0Y5 90 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 APOC3P02656 99 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 S100A8P05109 93 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 TIRAPP58753 221 aa5.76□□□□□ -1.49
VRK3-211ENST00000596445 HBBP68871 147 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms