RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 DPH3P1Q9H4G8 78 aa11.53□□□□□ -0.56
ZNF541-205ENST00000595558 LINC00477Q96M19 166 aa11.52□□□□□ -0.57
ZNF541-205ENST00000595558 PRADC1Q9BSG0 188 aa11.52□□□□□ -0.57
ZNF541-205ENST00000595558 GTSF1LQ9H1H1 148 aa11.52□□□□□ -0.57
ZNF541-205ENST00000595558 ITPR3Q14573 2671 aa11.52□□□□□ -0.57
ZNF541-205ENST00000595558 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.57
ZNF541-205ENST00000595558 INSL3P51460 131 aa11.52□□□□□ -0.57
ZNF541-205ENST00000595558 KRTAP10-9P60411 292 aa11.51□□□□□ -0.57
ZNF541-205ENST00000595558 RRN3P1Q2M238 152 aa11.51□□□□□ -0.57
ZNF541-205ENST00000595558 MORN3Q6PF18 240 aaPredicted RBP11.51□□□□□ -0.57
ZNF541-205ENST00000595558 FLNAP21333 2647 aaKnown RBP11.51□□□□□ -0.57
ZNF541-205ENST00000595558 TAL2Q16559 108 aa11.51□□□□□ -0.57
ZNF541-205ENST00000595558 TSSC4Q9Y5U2 329 aaPredicted RBP11.51□□□□□ -0.57
ZNF541-205ENST00000595558 FAM223BA6NKX1 122 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 CRYGDP07320 174 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 FAM223AQ8IWN6 122 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 TSHBP01222 138 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 MSMBP08118 114 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 SLC25A16P16260 332 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 CD300EQ496F6 205 aaPredicted RBP11.5□□□□□ -0.57
ZNF541-205ENST00000595558 LENEPQ9Y5L5 61 aa11.5□□□□□ -0.57
ZNF541-205ENST00000595558 IGHV4-59P01825 116 aa11.49□□□□□ -0.57
ZNF541-205ENST00000595558 FAM19A4Q96LR4 140 aa11.49□□□□□ -0.57
ZNF541-205ENST00000595558 PRO0461Q9UI25 63 aa11.49□□□□□ -0.57
ZNF541-205ENST00000595558 F8W1H4 67 aa11.49□□□□□ -0.57
ZNF541-205ENST00000595558 AZU1P20160 251 aa11.49□□□□□ -0.57
ZNF541-205ENST00000595558 LINC00315P59091 139 aa11.49□□□□□ -0.57
ZNF541-205ENST00000595558 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
ZNF541-205ENST00000595558 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
ZNF541-205ENST00000595558 ZNF815PA8K554 130 aa11.48□□□□□ -0.57
ZNF541-205ENST00000595558 OVOL1O14753 267 aa11.48□□□□□ -0.57
ZNF541-205ENST00000595558 A0A087WWL8 130 aa11.48□□□□□ -0.57
ZNF541-205ENST00000595558 NDUFA4O00483 81 aa11.48□□□□□ -0.57
ZNF541-205ENST00000595558 NOTCH2Q04721 2471 aa11.48□□□□□ -0.57
ZNF541-205ENST00000595558 SMAGPQ0VAQ4 97 aa11.48□□□□□ -0.57
ZNF541-205ENST00000595558 A0A1B0GWB2 263 aa11.47□□□□□ -0.57
ZNF541-205ENST00000595558 RHPN1-AS1Q9BWJ2 59 aa11.47□□□□□ -0.57
ZNF541-205ENST00000595558 PGPEP1Q9NXJ5 209 aa11.47□□□□□ -0.57
ZNF541-205ENST00000595558 C11orf86A6NJI1 115 aa11.47□□□□□ -0.57
ZNF541-205ENST00000595558 SCGB2A2Q13296 93 aa11.47□□□□□ -0.57
ZNF541-205ENST00000595558 GAGE13Q4V321 117 aa11.47□□□□□ -0.57
ZNF541-205ENST00000595558 KIF25-AS1Q9Y6Z4 181 aa11.47□□□□□ -0.57
ZNF541-205ENST00000595558 HELZ2Q9BYK8 2649 aaKnown RBP11.46□□□□□ -0.57
ZNF541-205ENST00000595558 HOXA3O43365 443 aaPredicted RBP11.46□□□□□ -0.57
ZNF541-205ENST00000595558 COX6B1P14854 86 aa11.46□□□□□ -0.57
ZNF541-205ENST00000595558 SAMD13Q5VXD3 122 aa11.46□□□□□ -0.57
ZNF541-205ENST00000595558 SCGB1D4Q6XE38 83 aa11.46□□□□□ -0.57
ZNF541-205ENST00000595558 TP53TG1Q9Y2A0 90 aa11.46□□□□□ -0.57
ZNF541-205ENST00000595558 JMJD1CQ15652 2540 aa11.46□□□□□ -0.57
ZNF541-205ENST00000595558 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.58
ZNF541-205ENST00000595558 DEFB112Q30KQ8 113 aa11.46□□□□□ -0.58
ZNF541-205ENST00000595558 GAGE12HA6NDE8 117 aa11.45□□□□□ -0.58
ZNF541-205ENST00000595558 A6NDX4 124 aa11.45□□□□□ -0.58
ZNF541-205ENST00000595558 LINC01549A6NIU2 74 aa11.45□□□□□ -0.58
ZNF541-205ENST00000595558 CRIP2P52943 208 aaPredicted RBP11.45□□□□□ -0.58
ZNF541-205ENST00000595558 ZFP2Q6ZN57 461 aa11.45□□□□□ -0.58
ZNF541-205ENST00000595558 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
ZNF541-205ENST00000595558 TGFAP01135 160 aa11.44□□□□□ -0.58
ZNF541-205ENST00000595558 TSPEAR-AS2P59090 65 aa11.44□□□□□ -0.58
ZNF541-205ENST00000595558 SRSF9Q13242 221 aaKnown RBP eCLIP11.44□□□□□ -0.58
ZNF541-205ENST00000595558 SUMO4Q6EEV6 95 aa11.44□□□□□ -0.58
ZNF541-205ENST00000595558 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 IGHG2P01859 326 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 APRG1Q8IVJ8 170 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 ATP6V0BQ99437 205 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 IGIPA6NJ69 53 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 F5H697 171 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 LINC01619G3V211 115 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 APOMO95445 188 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 IGKV3-20P01619 116 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 SMCPP49901 116 aaPredicted RBP11.43□□□□□ -0.58
ZNF541-205ENST00000595558 HIST2H2BCQ6DN03 193 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 SIGMAR1Q99720 223 aa11.43□□□□□ -0.58
ZNF541-205ENST00000595558 OPRPNQ99935 248 aaPredicted RBP11.43□□□□□ -0.58
ZNF541-205ENST00000595558 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
ZNF541-205ENST00000595558 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 TSPAN13O95857 204 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 CD7P09564 240 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 POLR2KP53803 58 aaKnown RBP11.41□□□□□ -0.58
ZNF541-205ENST00000595558 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 ZNRF2Q8NHG8 242 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 FAM159AQ6UWV7 190 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
ZNF541-205ENST00000595558 KLLNB2CW77 178 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 B4DSR2 109 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 NXPH4O95158 308 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 MED14OSP0DP75 135 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 UBE2D1P51668 147 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 PTH2Q96A98 100 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 PSMB2P49721 201 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 BEX4Q9NWD9 120 aaPredicted RBP11.4□□□□□ -0.58
ZNF541-205ENST00000595558 MDFICQ9P1T7 246 aa11.4□□□□□ -0.58
ZNF541-205ENST00000595558 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.58
ZNF541-205ENST00000595558 IGHV4OR15-8A0A075B7B6 117 aa11.39□□□□□ -0.59
ZNF541-205ENST00000595558 A0A087WW49 117 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms