RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SYT8Q8NBV8 401 aa9.89□□□□□ -0.83
VRK3-209ENST00000594948 GVINP1Q7Z2Y8 2422 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 LRBAP50851 2863 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 J3QQQ9 107 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 LEPROTO15243 131 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 IGHV3-11P01762 117 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 CFC1BP0CG36 223 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 CFC1P0CG37 223 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 TSPEAR-AS2P59090 65 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 DCANP1Q8TF63 244 aa9.88□□□□□ -0.83
VRK3-209ENST00000594948 IGHV3-16A0A0C4DH30 117 aa9.87□□□□□ -0.83
VRK3-209ENST00000594948 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
VRK3-209ENST00000594948 RPL39P62891 51 aaKnown RBP9.87□□□□□ -0.83
VRK3-209ENST00000594948 CFHR3Q02985 330 aa9.87□□□□□ -0.83
VRK3-209ENST00000594948 TMEM170BQ5T4T1 132 aa9.87□□□□□ -0.83
VRK3-209ENST00000594948 ZNRF2Q8NHG8 242 aa9.87□□□□□ -0.83
VRK3-209ENST00000594948 CDIP1Q9H305 208 aa9.87□□□□□ -0.83
VRK3-209ENST00000594948 PRO1854Q9UHT4 67 aa9.87□□□□□ -0.83
VRK3-209ENST00000594948 LAMA5O15230 3695 aa9.87□□□□□ -0.83
VRK3-209ENST00000594948 A0A0J9YX75 114 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 TMEM223A0PJW6 202 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 IGHV4-39P01824 125 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 CLEC2AQ6UVW9 174 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
VRK3-209ENST00000594948 MDFICQ9P1T7 246 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 SPTBN2O15020 2390 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 IGHV3OR16-10A0A075B7F0 116 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 A8MWV9 139 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 F5H697 171 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 H3BUX3 64 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 TCL1BO95988 128 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 CRYBA4P53673 196 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 BRD3OSQ6XYD6 125 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 Q6ZS46 218 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 JPT2Q9H910 190 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 ABCA2Q9BZC7 2435 aa9.86□□□□□ -0.83
VRK3-209ENST00000594948 PTPRZ1P23471 2315 aaPredicted RBP9.85□□□□□ -0.83
VRK3-209ENST00000594948 ZFHX2Q9C0A1 2572 aaPredicted RBP9.85□□□□□ -0.83
VRK3-209ENST00000594948 A0A087WWL8 130 aa9.85□□□□□ -0.83
VRK3-209ENST00000594948 A0A0B4J2C4 111 aa9.85□□□□□ -0.83
VRK3-209ENST00000594948 M0QY20 66 aa9.85□□□□□ -0.83
VRK3-209ENST00000594948 RNF152Q8N8N0 203 aa9.85□□□□□ -0.83
VRK3-209ENST00000594948 PIMREGQ9BSJ6 248 aa9.85□□□□□ -0.83
VRK3-209ENST00000594948 TRAV12-3A0A0B4J271 114 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 EMP1P54849 157 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 LY6EQ16553 131 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 ZNF418Q8TF45 676 aaPredicted RBP9.84□□□□□ -0.83
VRK3-209ENST00000594948 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 EDA2RQ9HAV5 297 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 ZNF256Q9Y2P7 627 aaPredicted RBP9.84□□□□□ -0.83
VRK3-209ENST00000594948 IGKV3-7A0A075B6H7 116 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 TMEM89A2RUT3 159 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 CKS1BP61024 79 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 C20orf203Q8NBC4 194 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 LINC01600Q96MT4 127 aa9.84□□□□□ -0.83
VRK3-209ENST00000594948 P0DMU3 169 aa9.83□□□□□ -0.84
VRK3-209ENST00000594948 FAM231AP0DMU4 169 aa9.83□□□□□ -0.84
VRK3-209ENST00000594948 FAM231CP0DMU5 169 aa9.83□□□□□ -0.84
VRK3-209ENST00000594948 IGHV4-38-2P0DP08 117 aa9.83□□□□□ -0.84
VRK3-209ENST00000594948 IGHV1OR15-1A0A075B7D0 117 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 TMEM262E9PQX1 116 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 I3L3M4 83 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 ZNF56Q15929 161 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 Q6ZUT4 128 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
VRK3-209ENST00000594948 IGHV4-61A0A0C4DH41 118 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 RHODO00212 210 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 IGHV3-33P01772 117 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 ZNF688P0C7X2 276 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
VRK3-209ENST00000594948 BLCAPP62952 87 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 C10orf105Q8TEF2 133 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
VRK3-209ENST00000594948 CACNA1BQ00975 2339 aa9.82□□□□□ -0.84
VRK3-209ENST00000594948 K7EQG2 157 aa9.81□□□□□ -0.84
VRK3-209ENST00000594948 SPINK8P0C7L1 97 aa9.81□□□□□ -0.84
VRK3-209ENST00000594948 SRD5A1P18405 259 aa9.81□□□□□ -0.84
VRK3-209ENST00000594948 SNRPD3P62318 126 aaKnown RBP9.81□□□□□ -0.84
VRK3-209ENST00000594948 PYGO1Q9Y3Y4 419 aa9.81□□□□□ -0.84
VRK3-209ENST00000594948 MED13LQ71F56 2210 aa9.81□□□□□ -0.84
VRK3-209ENST00000594948 DCHS1Q96JQ0 3298 aa9.81□□□□□ -0.84
VRK3-209ENST00000594948 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 A4D1N5 150 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 M0R2P5 195 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 FHL3Q13643 280 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 Q8N1Y9 231 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 PTH2Q96A98 100 aa9.8□□□□□ -0.84
VRK3-209ENST00000594948 IGLV4-3A0A075B6K6 122 aa9.79□□□□□ -0.84
VRK3-209ENST00000594948 PSMB8P28062 276 aa9.79□□□□□ -0.84
VRK3-209ENST00000594948 SFTA2Q6UW10 78 aa9.79□□□□□ -0.84
VRK3-209ENST00000594948 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
VRK3-209ENST00000594948 ERG28Q9UKR5 140 aa9.79□□□□□ -0.84
VRK3-209ENST00000594948 SLC25A20O43772 301 aa9.79□□□□□ -0.84
VRK3-209ENST00000594948 EDN2P20800 178 aa9.79□□□□□ -0.84
VRK3-209ENST00000594948 C19orf84I3L1E1 186 aa9.78□□□□□ -0.84
VRK3-209ENST00000594948 XGP55808 180 aa9.78□□□□□ -0.84
VRK3-209ENST00000594948 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.84
VRK3-209ENST00000594948 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms