RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DLX4Q92988 240 aaPredicted RBP12.34□□□□□ -0.43
LIG1-206ENST00000594067 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
LIG1-206ENST00000594067 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
LIG1-206ENST00000594067 TRBV7-9A0A0J9YWB2 115 aa12.34□□□□□ -0.43
LIG1-206ENST00000594067 A0A1B0GV72 72 aa12.34□□□□□ -0.43
LIG1-206ENST00000594067 ZFP2Q6ZN57 461 aa12.34□□□□□ -0.43
LIG1-206ENST00000594067 NXPH4O95158 308 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 TSPAN13O95857 204 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 PPP1R17O96001 155 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 AVPP01185 164 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 CD7P09564 240 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 EMP1P54849 157 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 PRORYQ9H606 182 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 SUMO4Q6EEV6 95 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 NFE4Q86UQ8 179 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 TP53TG1Q9Y2A0 90 aa12.33□□□□□ -0.44
LIG1-206ENST00000594067 F5H697 171 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 TSHBP01222 138 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 MSMBP08118 114 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 DCANP1Q8TF63 244 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 IGLV4-69A0A075B6H9 119 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 C11orf86A6NJI1 115 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 ID1P41134 155 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 UBE2D3P61077 147 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 UBE2D2P62837 147 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 CFHR3Q02985 330 aa12.32□□□□□ -0.44
LIG1-206ENST00000594067 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 IGKV3-20P01619 116 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 PSMB2P49721 201 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 RPL39P62891 51 aaKnown RBP12.31□□□□□ -0.44
LIG1-206ENST00000594067 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 SPG11Q96JI7 2443 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 C10orf99Q6UWK7 81 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 SYT8Q8NBV8 401 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 CDIP1Q9H305 208 aa12.31□□□□□ -0.44
LIG1-206ENST00000594067 IGHV4OR15-8A0A075B7B6 117 aa12.3□□□□□ -0.44
LIG1-206ENST00000594067 A0A087WW49 117 aa12.3□□□□□ -0.44
LIG1-206ENST00000594067 ZNF688P0C7X2 276 aa12.3□□□□□ -0.44
LIG1-206ENST00000594067 A0A0J9YY99 117 aa12.3□□□□□ -0.44
LIG1-206ENST00000594067 POLR2KP53803 58 aaKnown RBP12.3□□□□□ -0.44
LIG1-206ENST00000594067 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
LIG1-206ENST00000594067 TRAV12-2A0A075B6T6 113 aa12.29□□□□□ -0.44
LIG1-206ENST00000594067 IGIPA6NJ69 53 aa12.29□□□□□ -0.44
LIG1-206ENST00000594067 K7EMT4 169 aa12.29□□□□□ -0.44
LIG1-206ENST00000594067 NDUFA11Q86Y39 141 aa12.29□□□□□ -0.44
LIG1-206ENST00000594067 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
LIG1-206ENST00000594067 PTH2Q96A98 100 aa12.29□□□□□ -0.44
LIG1-206ENST00000594067 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.29□□□□□ -0.441e-7■■■■□ 21.9
LIG1-206ENST00000594067 CKS1BP61024 79 aa12.28□□□□□ -0.44
LIG1-206ENST00000594067 SDHAF1A6NFY7 115 aa12.28□□□□□ -0.44
LIG1-206ENST00000594067 FHL3Q13643 280 aa12.28□□□□□ -0.44
LIG1-206ENST00000594067 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
LIG1-206ENST00000594067 VCYO14598 125 aa12.27□□□□□ -0.44
LIG1-206ENST00000594067 KIR2DL4Q99706 377 aa12.27□□□□□ -0.44
LIG1-206ENST00000594067 MDFICQ9P1T7 246 aa12.27□□□□□ -0.44
LIG1-206ENST00000594067 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.45
LIG1-206ENST00000594067 PAPPA-AS1Q5QFB9 102 aa12.27□□□□□ -0.45
LIG1-206ENST00000594067 CELSR2Q9HCU4 2923 aa12.26□□□□□ -0.45
LIG1-206ENST00000594067 IGHV4-59P01825 116 aa12.26□□□□□ -0.45
LIG1-206ENST00000594067 PMVKQ15126 192 aa12.26□□□□□ -0.45
LIG1-206ENST00000594067 CARD19Q96LW7 228 aa12.26□□□□□ -0.45
LIG1-206ENST00000594067 ZNF256Q9Y2P7 627 aaPredicted RBP12.26□□□□□ -0.45
LIG1-206ENST00000594067 PSMB8P28062 276 aa12.26□□□□□ -0.45
LIG1-206ENST00000594067 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
LIG1-206ENST00000594067 TCL1BO95988 128 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 IGHV3-30P01768 117 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 CFC1BP0CG36 223 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 CFC1P0CG37 223 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 IGHV3-30-5P0DP03 117 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 HERVK_113P61574 105 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 IGHV3-16A0A0C4DH30 117 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 CSPG4Q6UVK1 2322 aa12.25□□□□□ -0.45
LIG1-206ENST00000594067 SLC25A29Q8N8R3 303 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 NRGNQ92686 78 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 B4DSR2 109 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 ZNF56Q15929 161 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 DEFB112Q30KQ8 113 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 TEN1Q86WV5 123 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 ZNRF2Q8NHG8 242 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 C9orf85Q96MD7 179 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 A0A0J9YX75 114 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 LGALS9O00182 355 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 CRYBA4P53673 196 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 SPINK13Q1W4C9 94 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 TMEM170BQ5T4T1 132 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 Q8N1Y9 231 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 TMEM141Q96I45 108 aa12.24□□□□□ -0.45
LIG1-206ENST00000594067 MT-ATP8P03928 68 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 LYRM7Q5U5X0 104 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 SBSPONQ8IVN8 264 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 PPDPFLQ8WWR9 84 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 AMELXQ99217 191 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 DUX5Q96PT3 197 aa12.23□□□□□ -0.45
LIG1-206ENST00000594067 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms