RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-241	ENST00000593048	ZFAND2A	Q8N6M9	145 aa		11.18	□□□□□ -0.62
CIRBP-241	ENST00000593048	C18orf15	Q96N68	181 aa		11.18	□□□□□ -0.62
CIRBP-241	ENST00000593048	UPK3B	Q9BT76	320 aa		11.18	□□□□□ -0.62
CIRBP-241	ENST00000593048	RPP21	Q9H633	154 aa	Known RBP	11.18	□□□□□ -0.62
CIRBP-241	ENST00000593048	NAT8B	Q9UHF3	227 aa		11.18	□□□□□ -0.62
CIRBP-241	ENST00000593048	TP53TG3	Q9ULZ0	132 aa		11.18	□□□□□ -0.62
CIRBP-241	ENST00000593048	MRPS16	Q9Y3D3	137 aa	Known RBP	11.18	□□□□□ -0.62
CIRBP-241	ENST00000593048	HSPG2	P98160	4391 aa		11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048		A0A1W2PPQ1	181 aa		11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048	FOXA3	P55318	350 aa	Predicted RBP	11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048	RPS20	P60866	119 aa	Known RBP	11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048	PRR9	Q5T870	116 aa		11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048	WDR73	Q6P4I2	378 aa		11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048		Q8TAT8	98 aa		11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048	VSIG2	Q96IQ7	327 aa		11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048	RNASE7	Q9H1E1	156 aa	Known RBP	11.17	□□□□□ -0.62
CIRBP-241	ENST00000593048		A0A096LPF7	62 aa		11.16	□□□□□ -0.62
CIRBP-241	ENST00000593048	PAX4	O43316	350 aa		11.16	□□□□□ -0.62
CIRBP-241	ENST00000593048	IGHV3-53	P01767	116 aa		11.16	□□□□□ -0.62
CIRBP-241	ENST00000593048	SMUG1	Q53HV7	270 aa		11.16	□□□□□ -0.62
CIRBP-241	ENST00000593048		Q6ZQT7	251 aa		11.16	□□□□□ -0.62
CIRBP-241	ENST00000593048	MRPL16	Q9NX20	251 aa	Known RBP	11.16	□□□□□ -0.62
CIRBP-241	ENST00000593048	ZNF415	Q09FC8	603 aa		11.15	□□□□□ -0.62
CIRBP-241	ENST00000593048	FAM162B	Q5T6X4	162 aa		11.15	□□□□□ -0.62
CIRBP-241	ENST00000593048	GNB1L	Q9BYB4	327 aa		11.15	□□□□□ -0.62
CIRBP-241	ENST00000593048	KRTAP4-5	Q9BYR2	181 aa		11.15	□□□□□ -0.62
CIRBP-241	ENST00000593048	ICOS	Q9Y6W8	199 aa		11.15	□□□□□ -0.62
CIRBP-241	ENST00000593048	TRAV8-1	A0A0A6YYK1	113 aa		11.14	□□□□□ -0.63
CIRBP-241	ENST00000593048		A0A1B0GW15	77 aa		11.14	□□□□□ -0.63
CIRBP-241	ENST00000593048	SLA	Q13239	276 aa		11.14	□□□□□ -0.63
CIRBP-241	ENST00000593048	MUC21	Q5SSG8	566 aa		11.14	□□□□□ -0.63
CIRBP-241	ENST00000593048	KRTAP1-5	Q9BYS1	174 aa		11.14	□□□□□ -0.63
CIRBP-241	ENST00000593048	FABP5P3	A8MUU1	101 aa		11.13	□□□□□ -0.63
CIRBP-241	ENST00000593048	S100A8	P05109	93 aa		11.13	□□□□□ -0.63
CIRBP-241	ENST00000593048	S100A6	P06703	90 aa		11.13	□□□□□ -0.63
CIRBP-241	ENST00000593048	PRR27	Q6MZM9	219 aa		11.13	□□□□□ -0.63
CIRBP-241	ENST00000593048	SPATA12	Q7Z6I5	190 aa		11.13	□□□□□ -0.63
CIRBP-241	ENST00000593048	PRO0255	Q9UI72	69 aa		11.13	□□□□□ -0.63
CIRBP-241	ENST00000593048	HHLA3	Q9XRX5	114 aa		11.13	□□□□□ -0.63
CIRBP-241	ENST00000593048	SIVA1	O15304	175 aa		11.12	□□□□□ -0.63
CIRBP-241	ENST00000593048	FAM159A	Q6UWV7	190 aa		11.12	□□□□□ -0.63
CIRBP-241	ENST00000593048	NHLRC2	Q8NBF2	726 aa		11.12	□□□□□ -0.63
CIRBP-241	ENST00000593048	ZC2HC1A	Q96GY0	325 aa		11.12	□□□□□ -0.63
CIRBP-241	ENST00000593048	C8orf49	Q96NF6	230 aa		11.12	□□□□□ -0.63
CIRBP-241	ENST00000593048	TRGV4	A0A0C4DH28	118 aa		11.11	□□□□□ -0.63
CIRBP-241	ENST00000593048	HLA-DQA1	P01909	254 aa		11.11	□□□□□ -0.63
CIRBP-241	ENST00000593048	BTF3	P20290	206 aa	Known RBP	11.11	□□□□□ -0.63
CIRBP-241	ENST00000593048	SGK494	Q96LW2	274 aa		11.11	□□□□□ -0.63
CIRBP-241	ENST00000593048	NAGK	Q9UJ70	344 aa		11.11	□□□□□ -0.63
CIRBP-241	ENST00000593048	TRGV11	A0A075B6L2	103 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	PHOX2A	O14813	284 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	NXPH4	O95158	308 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	TRGC2	P03986	189 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	CRYBA4	P53673	196 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	MRPL23	Q16540	153 aa	Known RBP	11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	OR2D3	Q8NGH3	330 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	MDFIC	Q9P1T7	246 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	TRAPPC1	Q9Y5R8	145 aa		11.1	□□□□□ -0.63
CIRBP-241	ENST00000593048	HIGD1C	A8MV81	97 aa		11.09	□□□□□ -0.63
CIRBP-241	ENST00000593048	CDK2AP2	O75956	126 aa		11.09	□□□□□ -0.63
CIRBP-241	ENST00000593048	FHL2	Q14192	279 aa		11.09	□□□□□ -0.63
CIRBP-241	ENST00000593048	NUP35	Q8NFH5	326 aa		11.09	□□□□□ -0.63
CIRBP-241	ENST00000593048	SPX	Q9BT56	116 aa		11.09	□□□□□ -0.63
CIRBP-241	ENST00000593048	LOC105371267	A0A1B0GV96	52 aa		11.08	□□□□□ -0.64
CIRBP-241	ENST00000593048	CRIP1	P50238	77 aa		11.08	□□□□□ -0.64
CIRBP-241	ENST00000593048	LINC00315	P59091	139 aa		11.08	□□□□□ -0.64
CIRBP-241	ENST00000593048	LINC01559	Q495D7	138 aa		11.08	□□□□□ -0.64
CIRBP-241	ENST00000593048	NEGR1	Q7Z3B1	354 aa		11.08	□□□□□ -0.64
CIRBP-241	ENST00000593048	BORCS7	Q96B45	105 aa		11.08	□□□□□ -0.64
CIRBP-241	ENST00000593048	C5orf52	A6NGY3	159 aa		11.07	□□□□□ -0.64
CIRBP-241	ENST00000593048		F2Z2F3	143 aa		11.07	□□□□□ -0.64
CIRBP-241	ENST00000593048	SH2D1A	O60880	128 aa		11.07	□□□□□ -0.64
CIRBP-241	ENST00000593048	COA6	Q5JTJ3	125 aa	Known RBP	11.07	□□□□□ -0.64
CIRBP-241	ENST00000593048	LYPD5	Q6UWN5	251 aa		11.07	□□□□□ -0.64
CIRBP-241	ENST00000593048	LRP1B	Q9NZR2	4599 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	TRAV21	A0A0B4J279	112 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BK	O60814	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BJ	P06899	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BO	P23527	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	SRI	P30626	198 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BB	P33778	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BD	P58876	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BC	P62807	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HBB	P68871	147 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	RIG	Q13278	110 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST2H2BE	Q16778	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	MAPKAPK5-AS1	Q8N8E1	139 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	GATD1	Q8NB37	220 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	RASL10A	Q92737	203 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BH	Q93079	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	ZNF479	Q96JC4	524 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BN	Q99877	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	HIST1H2BM	Q99879	126 aa		11.06	□□□□□ -0.64
CIRBP-241	ENST00000593048	TRAV9-2	A0A087WT02	112 aa		11.05	□□□□□ -0.64
CIRBP-241	ENST00000593048		A0A1B0GUT8	65 aa		11.05	□□□□□ -0.64
CIRBP-241	ENST00000593048		A0A1B0GXF2	115 aa		11.05	□□□□□ -0.64
CIRBP-241	ENST00000593048	GNRH2	O43555	120 aa		11.05	□□□□□ -0.64
CIRBP-241	ENST00000593048	TRGC1	P0CF51	173 aa		11.05	□□□□□ -0.64

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