RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 Q86TA4 180 aa7.65□□□□□ -1.18
CLIP3-204ENST00000590559 CIRBP-AS1Q8TBR5 109 aa7.65□□□□□ -1.18
CLIP3-204ENST00000590559 ZC2HC1AQ96GY0 325 aa7.65□□□□□ -1.18
CLIP3-204ENST00000590559 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
CLIP3-204ENST00000590559 FAM74A7A6NL05 159 aa7.64□□□□□ -1.19
CLIP3-204ENST00000590559 B4DEV8 164 aa7.64□□□□□ -1.19
CLIP3-204ENST00000590559 PEX7O00628 323 aa7.64□□□□□ -1.19
CLIP3-204ENST00000590559 RMI2Q96E14 147 aa7.64□□□□□ -1.19
CLIP3-204ENST00000590559 KLK12Q9UKR0 248 aa7.64□□□□□ -1.19
CLIP3-204ENST00000590559 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 TRBV10-1A0A0K0K1A3 114 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 CTXND1A0A1B0GTU2 59 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 RBFOX3A6NFN3 312 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 SH2D1AO60880 128 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 OXTP01178 125 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 SEC11BP0C7V7 166 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 UBE2D3P61077 147 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 UBE2D2P62837 147 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 ZNF674Q2M3X9 581 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 OR10G8Q8NGN5 311 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 HIST1H2BAQ96A08 127 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 NKX6-2Q9C056 277 aaPredicted RBP7.63□□□□□ -1.19
CLIP3-204ENST00000590559 ZFP30Q9Y2G7 519 aa7.63□□□□□ -1.19
CLIP3-204ENST00000590559 TRBV6-1A0A0K0K1D8 114 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 RPL7L1Q6DKI1 246 aaKnown RBP7.62□□□□□ -1.19
CLIP3-204ENST00000590559 ENHOQ6UWT2 76 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 SYT8Q8NBV8 401 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 OR11H4Q8NGC9 324 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 URGCP-MRPS24S4R325 110 aa7.62□□□□□ -1.19
CLIP3-204ENST00000590559 TRBV7-3A0A075B6L6 115 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 A0A087WWL8 130 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 GRIFINA4D1Z8 144 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 M0R036 132 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 IFNA7P01567 189 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 UBE2G2P60604 165 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 FAM162BQ5T6X4 162 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 FAM74A4Q5TZK3 123 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 UBE2WQ96B02 151 aa7.61□□□□□ -1.19
CLIP3-204ENST00000590559 TNXBP22105 4242 aa7.6□□□□□ -1.19
CLIP3-204ENST00000590559 LTAP01374 205 aa7.6□□□□□ -1.19
CLIP3-204ENST00000590559 Q0VG73 95 aa7.6□□□□□ -1.19
CLIP3-204ENST00000590559 ELOBQ15370 118 aa7.6□□□□□ -1.19
CLIP3-204ENST00000590559 PRR27Q6MZM9 219 aa7.6□□□□□ -1.19
CLIP3-204ENST00000590559 FMC1Q96HJ9 113 aa7.6□□□□□ -1.19
CLIP3-204ENST00000590559 PHLDA3Q9Y5J5 127 aa7.6□□□□□ -1.19
CLIP3-204ENST00000590559 A0A087WX48 190 aa7.59□□□□□ -1.19
CLIP3-204ENST00000590559 TRBV6-8A0A0A6YYG3 113 aa7.59□□□□□ -1.19
CLIP3-204ENST00000590559 G3V3Q6 166 aa7.59□□□□□ -1.19
CLIP3-204ENST00000590559 GIPP09681 153 aaPredicted RBP7.59□□□□□ -1.19
CLIP3-204ENST00000590559 TPT1P13693 172 aaKnown RBP7.59□□□□□ -1.19
CLIP3-204ENST00000590559 FHITP49789 147 aa7.59□□□□□ -1.19
CLIP3-204ENST00000590559 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
CLIP3-204ENST00000590559 ZFP82Q8N141 532 aa7.59□□□□□ -1.19
CLIP3-204ENST00000590559 NEXN-AS1Q8NBZ9 246 aa7.59□□□□□ -1.19
CLIP3-204ENST00000590559 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
CLIP3-204ENST00000590559 MED28Q9H204 178 aa7.59□□□□□ -1.19
CLIP3-204ENST00000590559 M0R381 172 aa7.58□□□□□ -1.2
CLIP3-204ENST00000590559 HNRNPA3P51991 378 aaKnown RBP7.58□□□□□ -1.2
CLIP3-204ENST00000590559 C14orf177Q52M58 125 aa7.58□□□□□ -1.2
CLIP3-204ENST00000590559 MPV17L2Q567V2 206 aa7.58□□□□□ -1.2
CLIP3-204ENST00000590559 KRTAP26-1Q6PEX3 210 aa7.58□□□□□ -1.2
CLIP3-204ENST00000590559 TCEAL7Q9BRU2 100 aa7.58□□□□□ -1.2
CLIP3-204ENST00000590559 SSBP4Q9BWG4 385 aaPredicted RBP7.58□□□□□ -1.2
CLIP3-204ENST00000590559 TMSB15BA0A087X1C1 80 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 BORCS7-ASMTA0A0B4J1R7 106 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 PTTG1O95997 202 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 CXCL1P09341 107 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 RAB4BP61018 213 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 NTM-AS1Q6ZSK4 140 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 INO80EQ8NBZ0 244 aaPredicted RBP7.57□□□□□ -1.2
CLIP3-204ENST00000590559 DAZAP1Q96EP5 407 aaKnown RBP7.57□□□□□ -1.2
CLIP3-204ENST00000590559 MLST8Q9BVC4 326 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 CYTL1Q9NRR1 136 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 PRR34Q9NV39 138 aa7.57□□□□□ -1.2
CLIP3-204ENST00000590559 MAP1LC3B2A6NCE7 125 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 SNAI2O43623 268 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 PRSS1P07477 247 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 UBE2G1P62253 170 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 C9orf163Q8N9P6 203 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 OR10AG1Q8NH19 301 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 MAP1LC3BQ9GZQ8 125 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 VAX2Q9UIW0 290 aa7.56□□□□□ -1.2
CLIP3-204ENST00000590559 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
CLIP3-204ENST00000590559 MIAQ16674 131 aa7.55□□□□□ -1.2
CLIP3-204ENST00000590559 AKR1C8PQ5T2L2 129 aa7.55□□□□□ -1.2
CLIP3-204ENST00000590559 DGAT2L7PQ6IED9 249 aa7.55□□□□□ -1.2
CLIP3-204ENST00000590559 KCNIP4Q6PIL6 250 aa7.55□□□□□ -1.2
CLIP3-204ENST00000590559 C15orf54Q8N8G6 183 aa7.55□□□□□ -1.2
CLIP3-204ENST00000590559 KIF25-AS1Q9Y6Z4 181 aa7.55□□□□□ -1.2
CLIP3-204ENST00000590559 FXYD6-FXYD2A0A087WZ82 144 aa7.54□□□□□ -1.2
CLIP3-204ENST00000590559 TMEM262E9PQX1 116 aa7.54□□□□□ -1.2
CLIP3-204ENST00000590559 PANO1I0J062 215 aa7.54□□□□□ -1.2
CLIP3-204ENST00000590559 RPL37AP61513 92 aaKnown RBP7.54□□□□□ -1.2
CLIP3-204ENST00000590559 RPL19P84098 196 aaKnown RBP7.54□□□□□ -1.2
CLIP3-204ENST00000590559 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.54□□□□□ -1.2
CLIP3-204ENST00000590559 CRPP02741 224 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms