RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 FAM74A4Q5TZK3 123 aa13.37□□□□□ -0.27
DDX39A-214ENST00000590556 UFSP1Q6NVU6 142 aa13.37□□□□□ -0.27
DDX39A-214ENST00000590556 PGLYRP4Q96LB8 373 aa13.37□□□□□ -0.27
DDX39A-214ENST00000590556 FAM231BA6NCW3 169 aa13.36□□□□□ -0.27
DDX39A-214ENST00000590556 FOXA3P55318 350 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-214ENST00000590556 AP1S3Q96PC3 154 aa13.36□□□□□ -0.27
DDX39A-214ENST00000590556 SEC11CQ9BY50 192 aa13.36□□□□□ -0.27
DDX39A-214ENST00000590556 MSRB1Q9NZV6 116 aa13.36□□□□□ -0.27
DDX39A-214ENST00000590556 HIGD1CA8MV81 97 aa13.35□□□□□ -0.27
DDX39A-214ENST00000590556 NTF3P20783 257 aa13.35□□□□□ -0.27
DDX39A-214ENST00000590556 CNFNQ9BYD5 112 aa13.35□□□□□ -0.27
DDX39A-214ENST00000590556 TRBV6-4A0A1B0GX49 114 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 PPP1R2P9O14990 202 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 SMIM17P0DL12 118 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 TWIST1Q15672 202 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 Q6ZSN1 163 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 C14orf178Q8N769 122 aaPredicted RBP13.34□□□□□ -0.27
DDX39A-214ENST00000590556 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 BORCS7Q96B45 105 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 ICOSQ9Y6W8 199 aa13.34□□□□□ -0.27
DDX39A-214ENST00000590556 MT-ND4LP03901 98 aa13.33□□□□□ -0.28
DDX39A-214ENST00000590556 TRGC1P0CF51 173 aa13.33□□□□□ -0.28
DDX39A-214ENST00000590556 GYPEP15421 78 aa13.33□□□□□ -0.28
DDX39A-214ENST00000590556 RHOHQ15669 191 aa13.33□□□□□ -0.28
DDX39A-214ENST00000590556 PRADC1Q9BSG0 188 aa13.33□□□□□ -0.28
DDX39A-214ENST00000590556 A0A096LPF7 62 aa13.32□□□□□ -0.28
DDX39A-214ENST00000590556 MRPL23Q16540 153 aaKnown RBP13.32□□□□□ -0.28
DDX39A-214ENST00000590556 RNF212Q495C1 297 aa13.32□□□□□ -0.28
DDX39A-214ENST00000590556 LGALS9CQ6DKI2 356 aa13.32□□□□□ -0.28
DDX39A-214ENST00000590556 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
DDX39A-214ENST00000590556 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
DDX39A-214ENST00000590556 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
DDX39A-214ENST00000590556 ALMS1Q8TCU4 4167 aa13.32□□□□□ -0.28
DDX39A-214ENST00000590556 LCE6AA0A183 80 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 SMIM27A0A1W2PRY6 76 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 LY6G6CO95867 125 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 P0DMU3 169 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 FAM231AP0DMU4 169 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 FAM231CP0DMU5 169 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 ZNF56Q15929 161 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 NUP35Q8NFH5 326 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 ANAPC16Q96DE5 110 aa13.31□□□□□ -0.28
DDX39A-214ENST00000590556 LOC100131303A0A0U1RQF7 123 aa13.3□□□□□ -0.28
DDX39A-214ENST00000590556 A0A1B0GUT8 65 aa13.3□□□□□ -0.28
DDX39A-214ENST00000590556 F5H697 171 aa13.3□□□□□ -0.28
DDX39A-214ENST00000590556 K7EQD1 137 aa13.3□□□□□ -0.28
DDX39A-214ENST00000590556 EVI2AP22794 236 aa13.3□□□□□ -0.28
DDX39A-214ENST00000590556 RAB4BP61018 213 aa13.3□□□□□ -0.28
DDX39A-214ENST00000590556 C10orf91Q5T1B1 145 aa13.3□□□□□ -0.28
DDX39A-214ENST00000590556 SRIP30626 198 aa13.29□□□□□ -0.28
DDX39A-214ENST00000590556 SMIM15Q7Z3B0 74 aa13.29□□□□□ -0.28
DDX39A-214ENST00000590556 UBE2DNLQ8IWF7 75 aa13.29□□□□□ -0.28
DDX39A-214ENST00000590556 LYSTQ99698 3801 aa13.29□□□□□ -0.28
DDX39A-214ENST00000590556 DPH3P1Q9H4G8 78 aa13.29□□□□□ -0.28
DDX39A-214ENST00000590556 CARHSP1Q9Y2V2 147 aaKnown RBP13.29□□□□□ -0.28
DDX39A-214ENST00000590556 MGPP08493 103 aa13.28□□□□□ -0.28
DDX39A-214ENST00000590556 LINC00315P59091 139 aa13.28□□□□□ -0.28
DDX39A-214ENST00000590556 RIGQ13278 110 aa13.28□□□□□ -0.28
DDX39A-214ENST00000590556 CCL18P55774 89 aa13.27□□□□□ -0.29
DDX39A-214ENST00000590556 NEGR1Q7Z3B1 354 aa13.27□□□□□ -0.29
DDX39A-214ENST00000590556 SH2D6Q7Z4S9 175 aa13.26□□□□□ -0.29
DDX39A-214ENST00000590556 DNAH1Q9P2D7 4330 aa13.26□□□□□ -0.29
DDX39A-214ENST00000590556 GAGE12JA6NER3 117 aa13.25□□□□□ -0.29
DDX39A-214ENST00000590556 GAGE1Q13065 139 aa13.25□□□□□ -0.29
DDX39A-214ENST00000590556 GAGE4Q13068 117 aa13.25□□□□□ -0.29
DDX39A-214ENST00000590556 GAGE5Q13069 117 aa13.25□□□□□ -0.29
DDX39A-214ENST00000590556 ESRGQ1W209 222 aa13.25□□□□□ -0.29
DDX39A-214ENST00000590556 GAGE13Q4V321 117 aa13.25□□□□□ -0.29
DDX39A-214ENST00000590556 Q9UF83 564 aa13.25□□□□□ -0.29
DDX39A-214ENST00000590556 TRBV10-1A0A0K0K1A3 114 aa13.24□□□□□ -0.29
DDX39A-214ENST00000590556 SLC7A5P1Q8MH63 180 aa13.24□□□□□ -0.29
DDX39A-214ENST00000590556 CTDSP1Q9GZU7 261 aa13.24□□□□□ -0.29
DDX39A-214ENST00000590556 LINC00588Q9Y4M8 146 aa13.24□□□□□ -0.29
DDX39A-214ENST00000590556 NDUFA5Q16718 116 aa13.23□□□□□ -0.29
DDX39A-214ENST00000590556 SUMO4Q6EEV6 95 aa13.23□□□□□ -0.29
DDX39A-214ENST00000590556 LYPD5Q6UWN5 251 aa13.23□□□□□ -0.29
DDX39A-214ENST00000590556 A0A1B0GW15 77 aa13.22□□□□□ -0.29
DDX39A-214ENST00000590556 H7C1H1 209 aa13.22□□□□□ -0.29
DDX39A-214ENST00000590556 APOC3P02656 99 aa13.22□□□□□ -0.29
DDX39A-214ENST00000590556 FAM3BP58499 235 aaPredicted RBP13.22□□□□□ -0.29
DDX39A-214ENST00000590556 RPL36AP83881 106 aaKnown RBP13.22□□□□□ -0.29
DDX39A-214ENST00000590556 CLRN3Q8NCR9 226 aa13.22□□□□□ -0.29
DDX39A-214ENST00000590556 RPL36ALQ969Q0 106 aaKnown RBP13.22□□□□□ -0.29
DDX39A-214ENST00000590556 TMEM191AQ9H0A3 160 aa13.22□□□□□ -0.29
DDX39A-214ENST00000590556 VPS13DQ5THJ4 4388 aa13.21□□□□□ -0.29
DDX39A-214ENST00000590556 C7orf77A4D0Y5 90 aa13.21□□□□□ -0.29
DDX39A-214ENST00000590556 M0QY20 66 aa13.21□□□□□ -0.29
DDX39A-214ENST00000590556 LINC00694P0DN24 101 aa13.21□□□□□ -0.29
DDX39A-214ENST00000590556 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
DDX39A-214ENST00000590556 ATP6V0E2Q8NHE4 81 aa13.21□□□□□ -0.29
DDX39A-214ENST00000590556 ZNRF2Q8NHG8 242 aa13.21□□□□□ -0.29
DDX39A-214ENST00000590556 TRBV7-3A0A075B6L6 115 aa13.2□□□□□ -0.3
DDX39A-214ENST00000590556 CAMPP49913 170 aa13.2□□□□□ -0.3
DDX39A-214ENST00000590556 RHEBQ15382 184 aa13.2□□□□□ -0.3
DDX39A-214ENST00000590556 NEXN-AS1Q8NBZ9 246 aa13.2□□□□□ -0.3
DDX39A-214ENST00000590556 IMMP2LQ96T52 175 aa13.2□□□□□ -0.3
DDX39A-214ENST00000590556 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
DDX39A-214ENST00000590556 KMT2CQ8NEZ4 4911 aaKnown RBP13.19□□□□□ -0.3
DDX39A-214ENST00000590556 S100A8P05109 93 aa13.19□□□□□ -0.3
DDX39A-214ENST00000590556 HBBP68871 147 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms