RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PRR9Q5T870 116 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 PVRIGQ6DKI7 326 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 SLC25A29Q8N8R3 303 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 MBD3L2Q8NHZ7 208 aaPredicted RBP11.53□□□□□ -0.56
CIRBP-228ENST00000590347 NRGNQ92686 78 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 PSMG3-AS1Q96PY0 264 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 CREBBPQ92793 2442 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 NPFFO15130 113 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 CD3EP07766 207 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 S100A4P26447 101 aaKnown RBP11.53□□□□□ -0.56
CIRBP-228ENST00000590347 ATXN8Q156A1 80 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 JPT2Q9H910 190 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 NACAE9PAV3 2078 aa11.52□□□□□ -0.56
CIRBP-228ENST00000590347 IGKV3-7A0A075B6H7 116 aa11.52□□□□□ -0.56
CIRBP-228ENST00000590347 J3QQQ9 107 aa11.52□□□□□ -0.56
CIRBP-228ENST00000590347 TMEM263Q8WUH6 116 aaKnown RBP11.52□□□□□ -0.56
CIRBP-228ENST00000590347 SMIM9A6NGZ8 99 aa11.52□□□□□ -0.57
CIRBP-228ENST00000590347 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.57
CIRBP-228ENST00000590347 LINC01559Q495D7 138 aa11.52□□□□□ -0.57
CIRBP-228ENST00000590347 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.57
CIRBP-228ENST00000590347 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.57
CIRBP-228ENST00000590347 C2CD3Q4AC94 2353 aa11.52□□□□□ -0.57
CIRBP-228ENST00000590347 H7C423 109 aa11.51□□□□□ -0.57
CIRBP-228ENST00000590347 CRYGBP07316 175 aa11.51□□□□□ -0.57
CIRBP-228ENST00000590347 NDPQ00604 133 aa11.51□□□□□ -0.57
CIRBP-228ENST00000590347 PDE6HQ13956 83 aa11.51□□□□□ -0.57
CIRBP-228ENST00000590347 UBE2E1P51965 193 aa11.51□□□□□ -0.57
CIRBP-228ENST00000590347 NSUN5P1Q3KNT7 163 aa11.51□□□□□ -0.57
CIRBP-228ENST00000590347 A0A0G2JNJ9 132 aa11.5□□□□□ -0.57
CIRBP-228ENST00000590347 DUX5Q96PT3 197 aa11.5□□□□□ -0.57
CIRBP-228ENST00000590347 Q9UFV3 132 aa11.5□□□□□ -0.57
CIRBP-228ENST00000590347 CYSTM1Q9H1C7 97 aa11.5□□□□□ -0.57
CIRBP-228ENST00000590347 NOTCH3Q9UM47 2321 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-228ENST00000590347 C5orf47Q569G3 176 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 Q6Q795 121 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 IGFL3Q6UXB1 125 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 DAND5Q8N907 189 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 C1orf162Q8NEQ5 155 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-228ENST00000590347 ZNF256Q9Y2P7 627 aaPredicted RBP11.49□□□□□ -0.57
CIRBP-228ENST00000590347 TRBV10-2A0A0K0K1G8 114 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 A8MZ25 164 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 Q8NA96 180 aa11.49□□□□□ -0.57
CIRBP-228ENST00000590347 A0A087WWL8 130 aa11.48□□□□□ -0.57
CIRBP-228ENST00000590347 FANCD2OSQ96PS1 177 aa11.48□□□□□ -0.57
CIRBP-228ENST00000590347 ANKHD1Q8IWZ3 2542 aaKnown RBP11.48□□□□□ -0.57
CIRBP-228ENST00000590347 NDUFA7O95182 113 aa11.48□□□□□ -0.57
CIRBP-228ENST00000590347 GATA4P43694 442 aa11.48□□□□□ -0.57
CIRBP-228ENST00000590347 MFAP4P55083 255 aa11.48□□□□□ -0.57
CIRBP-228ENST00000590347 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
CIRBP-228ENST00000590347 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
CIRBP-228ENST00000590347 PRRC2AP48634 2157 aaKnown RBP11.48□□□□□ -0.57
CIRBP-228ENST00000590347 IGLV3-9A0A075B6K5 115 aa11.47□□□□□ -0.57
CIRBP-228ENST00000590347 F5H697 171 aa11.47□□□□□ -0.57
CIRBP-228ENST00000590347 GNRH2O43555 120 aa11.47□□□□□ -0.57
CIRBP-228ENST00000590347 IGF2-ASQ6U949 168 aa11.47□□□□□ -0.57
CIRBP-228ENST00000590347 AMELXQ99217 191 aa11.47□□□□□ -0.57
CIRBP-228ENST00000590347 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
CIRBP-228ENST00000590347 DNAJC30Q96LL9 226 aa11.47□□□□□ -0.57
CIRBP-228ENST00000590347 A0A0U1RRA0 63 aa11.46□□□□□ -0.57
CIRBP-228ENST00000590347 PHLDA3Q9Y5J5 127 aa11.46□□□□□ -0.57
CIRBP-228ENST00000590347 RNF223E7ERA6 249 aa11.46□□□□□ -0.57
CIRBP-228ENST00000590347 SMCR5Q8TEV8 140 aa11.46□□□□□ -0.57
CIRBP-228ENST00000590347 hADV29S1A0JD25 119 aa11.46□□□□□ -0.58
CIRBP-228ENST00000590347 ZNF672Q499Z4 452 aaPredicted RBP11.46□□□□□ -0.58
CIRBP-228ENST00000590347 FAM74A4Q5TZK3 123 aa11.46□□□□□ -0.58
CIRBP-228ENST00000590347 BUB1B-PAK6H3BSN5 160 aa11.45□□□□□ -0.58
CIRBP-228ENST00000590347 CTSGP08311 255 aa11.44□□□□□ -0.58
CIRBP-228ENST00000590347 BSPH1Q075Z2 132 aa11.44□□□□□ -0.58
CIRBP-228ENST00000590347 TMEM101Q96IK0 257 aa11.44□□□□□ -0.58
CIRBP-228ENST00000590347 SPXQ9BT56 116 aa11.44□□□□□ -0.58
CIRBP-228ENST00000590347 PIEZO1Q92508 2521 aa11.44□□□□□ -0.58
CIRBP-228ENST00000590347 MUC4Q99102 2169 aa11.43□□□□□ -0.58
CIRBP-228ENST00000590347 F6UB75 175 aa11.43□□□□□ -0.58
CIRBP-228ENST00000590347 SLC50A1Q9BRV3 221 aa11.43□□□□□ -0.58
CIRBP-228ENST00000590347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.589e-15■■■■□ 22
CIRBP-228ENST00000590347 TMEM178BH3BS89 294 aa11.43□□□□□ -0.58
CIRBP-228ENST00000590347 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.43□□□□□ -0.58
CIRBP-228ENST00000590347 C3orf22Q8N5N4 141 aa11.43□□□□□ -0.58
CIRBP-228ENST00000590347 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 GRNP28799 593 aaKnown RBP11.42□□□□□ -0.58
CIRBP-228ENST00000590347 RPL13AP40429 203 aaKnown RBP11.42□□□□□ -0.58
CIRBP-228ENST00000590347 COX8CQ7Z4L0 72 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 METTL26Q96S19 204 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 ICOSQ9Y6W8 199 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 C4orf26Q17RF5 130 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 LINC00311Q8N616 119 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 C17orf100A8MU93 164 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 DSCR8Q96T75 97 aa11.42□□□□□ -0.58
CIRBP-228ENST00000590347 CLPSL1A2RUU4 121 aa11.41□□□□□ -0.58
CIRBP-228ENST00000590347 B9A039 149 aa11.41□□□□□ -0.58
CIRBP-228ENST00000590347 TMEM30BQ3MIR4 351 aa11.41□□□□□ -0.58
CIRBP-228ENST00000590347 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
CIRBP-228ENST00000590347 HRCT1Q6UXD1 115 aa11.41□□□□□ -0.58
CIRBP-228ENST00000590347 LINC01560Q8TB33 94 aa11.41□□□□□ -0.58
CIRBP-228ENST00000590347 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
CIRBP-228ENST00000590347 ECSCRQ19T08 205 aa11.4□□□□□ -0.58
CIRBP-228ENST00000590347 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms