RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 SAMD10Q9BYL1 202 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 GTSF1LQ9H1H1 148 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 PARLQ9H300 379 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 SRRM2Q9UQ35 2752 aaKnown RBP12□□□□□ -0.49
H3F3B-209ENST00000589949 TRAV8-6A0A0B4J262 113 aa12□□□□□ -0.49
H3F3B-209ENST00000589949 MGST1P10620 155 aaKnown RBP12□□□□□ -0.49
H3F3B-209ENST00000589949 TAGLN2P37802 199 aaKnown RBP12□□□□□ -0.49
H3F3B-209ENST00000589949 WFDC2Q14508 124 aa12□□□□□ -0.49
H3F3B-209ENST00000589949 UFSP1Q6NVU6 142 aa12□□□□□ -0.49
H3F3B-209ENST00000589949 EIF5A2Q9GZV4 153 aaKnown RBP12□□□□□ -0.49
H3F3B-209ENST00000589949 SMDT1Q9H4I9 107 aa12□□□□□ -0.49
H3F3B-209ENST00000589949 GNG13Q9P2W3 67 aa12□□□□□ -0.49
H3F3B-209ENST00000589949 VPS13BQ7Z7G8 4022 aa12□□□□□ -0.49
H3F3B-209ENST00000589949 INAFM2P0DMQ5 153 aa11.99□□□□□ -0.49
H3F3B-209ENST00000589949 TOR2AQ5JU69 321 aa11.99□□□□□ -0.49
H3F3B-209ENST00000589949 MANBALQ9NQG1 85 aa11.99□□□□□ -0.49
H3F3B-209ENST00000589949 IGLV5-52A0A0A0MRZ9 124 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 GAGE12JA6NER3 117 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 FAM74A7A6NL05 159 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 PEX7O00628 323 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 PSCAO43653 123 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 BCL2P10415 239 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 SRSF3P84103 164 aaKnown RBP11.98□□□□□ -0.49
H3F3B-209ENST00000589949 GAGE1Q13065 139 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 GAGE4Q13068 117 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 GAGE5Q13069 117 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 GAGE13Q4V321 117 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 Q86TA4 180 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 Q8N814 137 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 ZC2HC1AQ96GY0 325 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 FAM30AQ9NZY2 134 aa11.98□□□□□ -0.49
H3F3B-209ENST00000589949 FABP5P3A8MUU1 101 aa11.97□□□□□ -0.49
H3F3B-209ENST00000589949 S100A1P23297 94 aa11.97□□□□□ -0.49
H3F3B-209ENST00000589949 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
H3F3B-209ENST00000589949 ZFP2Q6ZN57 461 aa11.97□□□□□ -0.49
H3F3B-209ENST00000589949 C14orf178Q8N769 122 aaPredicted RBP11.97□□□□□ -0.49
H3F3B-209ENST00000589949 VAX2Q9UIW0 290 aa11.97□□□□□ -0.49
H3F3B-209ENST00000589949 KRBOX1C9JBD0 128 aa11.96□□□□□ -0.49
H3F3B-209ENST00000589949 NDUFS6O75380 124 aaKnown RBP11.96□□□□□ -0.49
H3F3B-209ENST00000589949 ASIPP42127 132 aa11.96□□□□□ -0.49
H3F3B-209ENST00000589949 IL36BQ9NZH7 164 aa11.96□□□□□ -0.49
H3F3B-209ENST00000589949 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 A8MWV9 139 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 H3BVH4 76 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 M0R036 132 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 PAGE4O60829 102 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 S100A4P26447 101 aaKnown RBP11.95□□□□□ -0.5
H3F3B-209ENST00000589949 PIK3CD-AS1Q5SR53 167 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 DAZ4Q86SG3 579 aaKnown RBP11.95□□□□□ -0.5
H3F3B-209ENST00000589949 FRZBQ92765 325 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 DAZ3Q9NR90 486 aaKnown RBP11.95□□□□□ -0.5
H3F3B-209ENST00000589949 MYCBP2O75592 4640 aa11.95□□□□□ -0.5
H3F3B-209ENST00000589949 TMEM218A2RU14 115 aa11.94□□□□□ -0.5
H3F3B-209ENST00000589949 B4DEV8 164 aa11.94□□□□□ -0.5
H3F3B-209ENST00000589949 SH2D1AO60880 128 aa11.94□□□□□ -0.5
H3F3B-209ENST00000589949 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
H3F3B-209ENST00000589949 DNLZQ5SXM8 178 aa11.94□□□□□ -0.5
H3F3B-209ENST00000589949 COX8CQ7Z4L0 72 aa11.94□□□□□ -0.5
H3F3B-209ENST00000589949 NTN5Q8WTR8 489 aaPredicted RBP11.94□□□□□ -0.5
H3F3B-209ENST00000589949 C9JQL5 133 aa11.93□□□□□ -0.5
H3F3B-209ENST00000589949 SRP19P09132 144 aaKnown RBP11.93□□□□□ -0.5
H3F3B-209ENST00000589949 ARMS2P0C7Q2 107 aa11.93□□□□□ -0.5
H3F3B-209ENST00000589949 LAGE3Q14657 143 aa11.93□□□□□ -0.5
H3F3B-209ENST00000589949 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
H3F3B-209ENST00000589949 TMEM70Q9BUB7 260 aa11.93□□□□□ -0.5
H3F3B-209ENST00000589949 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
H3F3B-209ENST00000589949 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
H3F3B-209ENST00000589949 LECT2O14960 151 aa11.92□□□□□ -0.5
H3F3B-209ENST00000589949 CST9LP1Q5W188 147 aa11.92□□□□□ -0.5
H3F3B-209ENST00000589949 HIST1H2BAQ96A08 127 aa11.92□□□□□ -0.5
H3F3B-209ENST00000589949 DNAH8Q96JB1 4490 aa11.91□□□□□ -0.5
H3F3B-209ENST00000589949 DMBT1Q9UGM3 2413 aaPredicted RBP11.9□□□□□ -0.5
H3F3B-209ENST00000589949 A0A087WWL8 130 aa11.9□□□□□ -0.5
H3F3B-209ENST00000589949 TMSB15BA0A087X1C1 80 aa11.9□□□□□ -0.5
H3F3B-209ENST00000589949 ZNF674Q2M3X9 581 aa11.9□□□□□ -0.5
H3F3B-209ENST00000589949 ZFP30Q9Y2G7 519 aa11.9□□□□□ -0.5
H3F3B-209ENST00000589949 F8W036 122 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 TMEM250H0YL14 139 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 PDE6DO43924 150 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 LTAP01374 205 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 C10orf91Q5T1B1 145 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 SFRP2Q96HF1 295 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 SEC11CQ9BY50 192 aa11.89□□□□□ -0.51
H3F3B-209ENST00000589949 LINC01559Q495D7 138 aa11.88□□□□□ -0.51
H3F3B-209ENST00000589949 FMC1Q96HJ9 113 aa11.88□□□□□ -0.51
H3F3B-209ENST00000589949 TM2D2Q9BX73 214 aa11.88□□□□□ -0.51
H3F3B-209ENST00000589949 TRBV6-1A0A0K0K1D8 114 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 M0R381 172 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 ADCYAP1P18509 176 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 Q6ZSA8 131 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 NIT1Q86X76 327 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 BAALCQ8WXS3 180 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 TCEAL7Q9BRU2 100 aa11.87□□□□□ -0.51
H3F3B-209ENST00000589949 A0A087WWC5 75 aa11.86□□□□□ -0.51
H3F3B-209ENST00000589949 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
H3F3B-209ENST00000589949 FAM229AH3BQW9 127 aa11.86□□□□□ -0.51
H3F3B-209ENST00000589949 RHODO00212 210 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms