RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 NUP210Q8TEM1 1887 aaPredicted RBP11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 C20orf203Q8NBC4 194 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 CLUHP3Q96NS8 147 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 IGHV7-81A0A0B4J1V7 117 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 MDFICQ9P1T7 246 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 ACACAQ13085 2346 aa11.26□□□□□ -0.61
SMARCA4-214ENST00000589677 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
SMARCA4-214ENST00000589677 COX7A2LO14548 114 aa11.25□□□□□ -0.61
SMARCA4-214ENST00000589677 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
SMARCA4-214ENST00000589677 MSMBP08118 114 aa11.25□□□□□ -0.61
SMARCA4-214ENST00000589677 CFAP126Q5VTH2 177 aa11.25□□□□□ -0.61
SMARCA4-214ENST00000589677 BRK1Q8WUW1 75 aa11.25□□□□□ -0.61
SMARCA4-214ENST00000589677 A0A0J9YXY3 114 aa11.25□□□□□ -0.61
SMARCA4-214ENST00000589677 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 EIF4EBP1Q13541 118 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 MAPKAPK5-AS1Q8N8E1 139 aa11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 FAM215AQ9Y5M1 114 aa11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 PCNTO95613 3336 aa11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 TMEM256-PLSCR3K7ERE1 68 aa11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 NDUFA7O95182 113 aa11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 ELANEP08246 267 aa11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 HOXB4P17483 251 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-214ENST00000589677 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 FUSP35637 526 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 NFE4Q86UQ8 179 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 A0A0J9YY99 117 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 PDE6GP18545 87 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 UFSP1Q6NVU6 142 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 KIAA1671Q9BY89 1806 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 Q8N976 141 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 XCL1P47992 114 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 LY6DQ14210 128 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
SMARCA4-214ENST00000589677 FAM236DA0A1B0GTK5 79 aa11.22□□□□□ -0.61
SMARCA4-214ENST00000589677 FAM236CP0DP71 79 aa11.22□□□□□ -0.61
SMARCA4-214ENST00000589677 ZNF80P51504 273 aaPredicted RBP11.22□□□□□ -0.61
SMARCA4-214ENST00000589677 ATP5EP2Q5VTU8 51 aa11.22□□□□□ -0.61
SMARCA4-214ENST00000589677 DNAH12Q6ZR08 3092 aa11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 WT1P19544 449 aaPredicted RBP11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 XGP55808 180 aa11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 PROP1O75360 226 aa11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 LINC00310P59036 64 aa11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 NREPQ16612 68 aa11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 C5orf38Q86SI9 138 aa11.21□□□□□ -0.61
SMARCA4-214ENST00000589677 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.62
SMARCA4-214ENST00000589677 ANGP03950 147 aaKnown RBP11.21□□□□□ -0.62
SMARCA4-214ENST00000589677 DAD1P61803 113 aa11.21□□□□□ -0.62
SMARCA4-214ENST00000589677 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.62
SMARCA4-214ENST00000589677 HIST2H2BDQ6DRA6 164 aa11.21□□□□□ -0.62
SMARCA4-214ENST00000589677 C14orf132Q9NPU4 83 aa11.21□□□□□ -0.62
SMARCA4-214ENST00000589677 ALPK3Q96L96 1907 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 K7EQD1 137 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 Q6Q795 121 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 CACNA1HO95180 2353 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 MYCNOSP40205 109 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 MP68P56378 58 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 IGLV1-47P01700 117 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
SMARCA4-214ENST00000589677 ROS1P08922 2347 aa11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 CCDC179H3BU77 68 aa11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 LRRC75A-AS1Q8N1F1 130 aa11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 WFDC9Q8NEX5 89 aa11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 F5H768 121 aa11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 TTC28Q96AY4 2481 aa11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 LINC00574Q9H8X3 128 aa11.19□□□□□ -0.62
SMARCA4-214ENST00000589677 Q9HAA7 133 aa11.18□□□□□ -0.62
SMARCA4-214ENST00000589677 POLEQ07864 2286 aa11.18□□□□□ -0.62
SMARCA4-214ENST00000589677 C20orf197Q8N268 126 aa11.18□□□□□ -0.62
SMARCA4-214ENST00000589677 UPK3BQ9BT76 320 aa11.18□□□□□ -0.62
SMARCA4-214ENST00000589677 TRAV23DV6A0A075B6W5 121 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 TRIAP1O43715 76 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 CGB3P0DN86 165 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 CGB7P0DN87 165 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 TMEM223A0PJW6 202 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 SDIM1Q6ZPB5 146 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 NOP10Q9NPE3 64 aaKnown RBP11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 ARHGAP21Q5T5U3 1957 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 ABCA1O95477 2261 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 MIR7-3HGQ8N6C7 128 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 Q8N9W7 124 aa11.17□□□□□ -0.62
SMARCA4-214ENST00000589677 K7ENP7 123 aa11.16□□□□□ -0.62
SMARCA4-214ENST00000589677 TRBV7-3A0A075B6L6 115 aa11.16□□□□□ -0.62
SMARCA4-214ENST00000589677 K7EMT4 169 aa11.16□□□□□ -0.62
SMARCA4-214ENST00000589677 CENPFP49454 3210 aa11.16□□□□□ -0.62
SMARCA4-214ENST00000589677 PRR30Q53SZ7 412 aaPredicted RBP11.16□□□□□ -0.62
SMARCA4-214ENST00000589677 CLPSL2Q6UWE3 100 aa11.16□□□□□ -0.62
SMARCA4-214ENST00000589677 RNF185Q96GF1 192 aa11.16□□□□□ -0.62
SMARCA4-214ENST00000589677 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 SERP2Q8N6R1 65 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 ARFGEF3Q5TH69 2177 aa11.15□□□□□ -0.62
SMARCA4-214ENST00000589677 DOCK7Q96N67 2140 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms