RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 APLNQ9ULZ1 77 aa13.73□□□□□ -0.21
CIRBP-220ENST00000588917 DNAH1Q9P2D7 4330 aa13.72□□□□□ -0.21
CIRBP-220ENST00000588917 MUC21A0A0G2JKD1 596 aa13.72□□□□□ -0.21
CIRBP-220ENST00000588917 MUC21A0A140T8X8 626 aa13.72□□□□□ -0.21
CIRBP-220ENST00000588917 TRGC1P0CF51 173 aa13.72□□□□□ -0.21
CIRBP-220ENST00000588917 CRYBA4P53673 196 aa13.72□□□□□ -0.21
CIRBP-220ENST00000588917 AP1S3Q96PC3 154 aa13.72□□□□□ -0.21
CIRBP-220ENST00000588917 NAT8BQ9UHF3 227 aa13.72□□□□□ -0.21
CIRBP-220ENST00000588917 TRBV6-4A0A1B0GX49 114 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 HIGD1CA8MV81 97 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 CRYGDP07320 174 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 GATA1P15976 413 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-220ENST00000588917 ADCYAP1P18509 176 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 TWIST1Q15672 202 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 C10orf91Q5T1B1 145 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 SMIM15Q7Z3B0 74 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 PGLYRP4Q96LB8 373 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 JPT2Q9H910 190 aa13.71□□□□□ -0.21
CIRBP-220ENST00000588917 MUC4Q99102 2169 aa13.71□□□□□ -0.22
CIRBP-220ENST00000588917 A0A0J9YY99 117 aa13.7□□□□□ -0.22
CIRBP-220ENST00000588917 NDUFA5Q16718 116 aa13.7□□□□□ -0.22
CIRBP-220ENST00000588917 PRADC1Q9BSG0 188 aa13.7□□□□□ -0.22
CIRBP-220ENST00000588917 BIRC6Q9NR09 4857 aa13.7□□□□□ -0.22
CIRBP-220ENST00000588917 IGHV3-73A0A0B4J1V6 119 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 A0A1B0GUT8 65 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 SMIM27A0A1W2PRY6 76 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 NUDT3O95989 172 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 RNF212Q495C1 297 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 FAM74A4Q5TZK3 123 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 UFSP1Q6NVU6 142 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 VSIG2Q96IQ7 327 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 SAMD10Q9BYL1 202 aa13.69□□□□□ -0.22
CIRBP-220ENST00000588917 CARHSP1Q9Y2V2 147 aaKnown RBP13.69□□□□□ -0.22
CIRBP-220ENST00000588917 A0A087WWL8 130 aa13.68□□□□□ -0.22
CIRBP-220ENST00000588917 RAB4BP61018 213 aa13.68□□□□□ -0.22
CIRBP-220ENST00000588917 RHOHQ15669 191 aa13.68□□□□□ -0.22
CIRBP-220ENST00000588917 MRPL23Q16540 153 aaKnown RBP13.68□□□□□ -0.22
CIRBP-220ENST00000588917 C14orf178Q8N769 122 aaPredicted RBP13.68□□□□□ -0.22
CIRBP-220ENST00000588917 SLC25A29Q8N8R3 303 aa13.68□□□□□ -0.22
CIRBP-220ENST00000588917 CTDSP1Q9GZU7 261 aa13.68□□□□□ -0.22
CIRBP-220ENST00000588917 MSRB1Q9NZV6 116 aa13.68□□□□□ -0.22
CIRBP-220ENST00000588917 RIGQ13278 110 aa13.67□□□□□ -0.22
CIRBP-220ENST00000588917 NUP35Q8NFH5 326 aa13.67□□□□□ -0.22
CIRBP-220ENST00000588917 ICOSQ9Y6W8 199 aa13.67□□□□□ -0.22
CIRBP-220ENST00000588917 SH2D6Q7Z4S9 175 aa13.66□□□□□ -0.22
CIRBP-220ENST00000588917 A0A1B0GW15 77 aa13.65□□□□□ -0.22
CIRBP-220ENST00000588917 F5H697 171 aa13.65□□□□□ -0.22
CIRBP-220ENST00000588917 P0DMU3 169 aa13.65□□□□□ -0.22
CIRBP-220ENST00000588917 FAM231AP0DMU4 169 aa13.65□□□□□ -0.22
CIRBP-220ENST00000588917 FAM231CP0DMU5 169 aa13.65□□□□□ -0.22
CIRBP-220ENST00000588917 DPH3P1Q9H4G8 78 aa13.65□□□□□ -0.22
CIRBP-220ENST00000588917 KIF25-AS1Q9Y6Z4 181 aa13.65□□□□□ -0.22
CIRBP-220ENST00000588917 GYPEP15421 78 aa13.64□□□□□ -0.23
CIRBP-220ENST00000588917 EVI2AP22794 236 aa13.64□□□□□ -0.23
CIRBP-220ENST00000588917 ZNF56Q15929 161 aa13.64□□□□□ -0.23
CIRBP-220ENST00000588917 LGALS9CQ6DKI2 356 aa13.64□□□□□ -0.23
CIRBP-220ENST00000588917 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
CIRBP-220ENST00000588917 TRBV10-1A0A0K0K1A3 114 aa13.63□□□□□ -0.23
CIRBP-220ENST00000588917 K7EQD1 137 aa13.63□□□□□ -0.23
CIRBP-220ENST00000588917 SRIP30626 198 aa13.63□□□□□ -0.23
CIRBP-220ENST00000588917 CCL18P55774 89 aa13.63□□□□□ -0.23
CIRBP-220ENST00000588917 TMEM242Q9NWH2 141 aa13.63□□□□□ -0.23
CIRBP-220ENST00000588917 A0A096LPF7 62 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 H7C1H1 209 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 APOC3P02656 99 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 S100A8P05109 93 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 RHEBQ15382 184 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 Q6ZSN1 163 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 NEGR1Q7Z3B1 354 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 SVBPQ8N300 66 aa13.62□□□□□ -0.23
CIRBP-220ENST00000588917 SNAPINO95295 136 aa13.61□□□□□ -0.23
CIRBP-220ENST00000588917 LINC00315P59091 139 aa13.61□□□□□ -0.23
CIRBP-220ENST00000588917 SLC7A5P1Q8MH63 180 aa13.61□□□□□ -0.23
CIRBP-220ENST00000588917 CLRN3Q8NCR9 226 aa13.61□□□□□ -0.23
CIRBP-220ENST00000588917 FRZBQ92765 325 aa13.61□□□□□ -0.23
CIRBP-220ENST00000588917 TMEM191AQ9H0A3 160 aa13.61□□□□□ -0.23
CIRBP-220ENST00000588917 A0A087WWC5 75 aa13.6□□□□□ -0.23
CIRBP-220ENST00000588917 MGPP08493 103 aa13.6□□□□□ -0.23
CIRBP-220ENST00000588917 KCNIP4Q6PIL6 250 aa13.6□□□□□ -0.23
CIRBP-220ENST00000588917 HYDINQ4G0P3 5121 aa13.6□□□□□ -0.23
CIRBP-220ENST00000588917 C7orf77A4D0Y5 90 aa13.59□□□□□ -0.23
CIRBP-220ENST00000588917 ATP5L2Q7Z4Y8 100 aa13.59□□□□□ -0.23
CIRBP-220ENST00000588917 S100PP25815 95 aa13.58□□□□□ -0.24
CIRBP-220ENST00000588917 FAM3BP58499 235 aaPredicted RBP13.58□□□□□ -0.24
CIRBP-220ENST00000588917 RPL36AP83881 106 aaKnown RBP13.58□□□□□ -0.24
CIRBP-220ENST00000588917 UBE2DNLQ8IWF7 75 aa13.58□□□□□ -0.24
CIRBP-220ENST00000588917 LINC00476Q8WZB0 136 aa13.58□□□□□ -0.24
CIRBP-220ENST00000588917 RPL36ALQ969Q0 106 aaKnown RBP13.58□□□□□ -0.24
CIRBP-220ENST00000588917 BTF3L4Q96K17 158 aa13.58□□□□□ -0.24
CIRBP-220ENST00000588917 RPS10P5Q9NQ39 176 aa13.58□□□□□ -0.24
CIRBP-220ENST00000588917 LY6G6CO95867 125 aa13.57□□□□□ -0.24
CIRBP-220ENST00000588917 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.57□□□□□ -0.24
CIRBP-220ENST00000588917 DNAJC30Q96LL9 226 aa13.57□□□□□ -0.24
CIRBP-220ENST00000588917 TRBV7-3A0A075B6L6 115 aa13.56□□□□□ -0.24
CIRBP-220ENST00000588917 TRAV9-1A0A075B6T8 112 aa13.56□□□□□ -0.24
CIRBP-220ENST00000588917 LOC100131303A0A0U1RQF7 123 aa13.56□□□□□ -0.24
CIRBP-220ENST00000588917 HBBP68871 147 aa13.56□□□□□ -0.24
CIRBP-220ENST00000588917 PLECQ15149 4684 aaKnown RBP13.56□□□□□ -0.24
CIRBP-220ENST00000588917 ESRGQ1W209 222 aa13.56□□□□□ -0.24
CIRBP-220ENST00000588917 ATP6V0E2Q8NHE4 81 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms