RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 HSD17B11Q8NBQ5 300 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 NKX6-2Q9C056 277 aaPredicted RBP9.14□□□□□ -0.95
VMP1-209ENST00000588915 JPT2Q9H910 190 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 ARL2-SNX15V9GYD0 113 aa9.14□□□□□ -0.95
VMP1-209ENST00000588915 B4DEV8 164 aa9.13□□□□□ -0.95
VMP1-209ENST00000588915 ARMS2P0C7Q2 107 aa9.13□□□□□ -0.95
VMP1-209ENST00000588915 OR11H4Q8NGC9 324 aa9.13□□□□□ -0.95
VMP1-209ENST00000588915 UBE2WQ96B02 151 aa9.13□□□□□ -0.95
VMP1-209ENST00000588915 SFRP2Q96HF1 295 aa9.13□□□□□ -0.95
VMP1-209ENST00000588915 AQP10Q96PS8 301 aa9.13□□□□□ -0.95
VMP1-209ENST00000588915 HMCN2Q8NDA2 5059 aa9.13□□□□□ -0.95
VMP1-209ENST00000588915 KRBOX1C9JBD0 128 aa9.12□□□□□ -0.95
VMP1-209ENST00000588915 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
VMP1-209ENST00000588915 ZFP30Q9Y2G7 519 aa9.12□□□□□ -0.95
VMP1-209ENST00000588915 TRAV34A0A0B4J273 112 aa9.11□□□□□ -0.95
VMP1-209ENST00000588915 H3BVH4 76 aa9.11□□□□□ -0.95
VMP1-209ENST00000588915 IFNA7P01567 189 aa9.11□□□□□ -0.95
VMP1-209ENST00000588915 RPL36AP83881 106 aaKnown RBP9.11□□□□□ -0.95
VMP1-209ENST00000588915 RPL36ALQ969Q0 106 aaKnown RBP9.11□□□□□ -0.95
VMP1-209ENST00000588915 PHLDA3Q9Y5J5 127 aa9.11□□□□□ -0.95
VMP1-209ENST00000588915 TRBV7-3A0A075B6L6 115 aa9.1□□□□□ -0.95
VMP1-209ENST00000588915 TPT1P13693 172 aaKnown RBP9.1□□□□□ -0.95
VMP1-209ENST00000588915 CRIP1P50238 77 aa9.1□□□□□ -0.95
VMP1-209ENST00000588915 UBE2D3P61077 147 aa9.1□□□□□ -0.95
VMP1-209ENST00000588915 UBE2D2P62837 147 aa9.1□□□□□ -0.95
VMP1-209ENST00000588915 FAM74A4Q5TZK3 123 aa9.1□□□□□ -0.95
VMP1-209ENST00000588915 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
VMP1-209ENST00000588915 CTXND1A0A1B0GTU2 59 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 PEX7O00628 323 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 FAM162BQ5T6X4 162 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 Q86TA4 180 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 ZFP82Q8N141 532 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 OR10G8Q8NGN5 311 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 ZC2HC1AQ96GY0 325 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 C1orf43Q9BWL3 253 aa9.09□□□□□ -0.95
VMP1-209ENST00000588915 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
VMP1-209ENST00000588915 PKIAP61925 76 aa9.08□□□□□ -0.96
VMP1-209ENST00000588915 ZNF674Q2M3X9 581 aa9.08□□□□□ -0.96
VMP1-209ENST00000588915 FMC1Q96HJ9 113 aa9.08□□□□□ -0.96
VMP1-209ENST00000588915 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
VMP1-209ENST00000588915 A0A087WWL8 130 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 GRIFINA4D1Z8 144 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 FAM74A7A6NL05 159 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 TMEM262E9PQX1 116 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 M0R036 132 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 SH2D1AO60880 128 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 DGAT2L7PQ6IED9 249 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 ENHOQ6UWT2 76 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 TCEAL7Q9BRU2 100 aa9.07□□□□□ -0.96
VMP1-209ENST00000588915 PKHD1L1Q86WI1 4243 aa9.06□□□□□ -0.96
VMP1-209ENST00000588915 M0R381 172 aa9.06□□□□□ -0.96
VMP1-209ENST00000588915 CRPP02741 224 aa9.06□□□□□ -0.96
VMP1-209ENST00000588915 RAB4BP61018 213 aa9.06□□□□□ -0.96
VMP1-209ENST00000588915 RPL37AP61513 92 aaKnown RBP9.06□□□□□ -0.96
VMP1-209ENST00000588915 ZNF726P1Q15940 193 aa9.06□□□□□ -0.96
VMP1-209ENST00000588915 MIAQ16674 131 aa9.06□□□□□ -0.96
VMP1-209ENST00000588915 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.06□□□□□ -0.96
VMP1-209ENST00000588915 BORCS7-ASMTA0A0B4J1R7 106 aa9.05□□□□□ -0.96
VMP1-209ENST00000588915 FHITP49789 147 aa9.05□□□□□ -0.96
VMP1-209ENST00000588915 UBE2G2P60604 165 aa9.05□□□□□ -0.96
VMP1-209ENST00000588915 UBE2G1P62253 170 aa9.05□□□□□ -0.96
VMP1-209ENST00000588915 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
VMP1-209ENST00000588915 C9orf163Q8N9P6 203 aa9.05□□□□□ -0.96
VMP1-209ENST00000588915 INO80EQ8NBZ0 244 aaPredicted RBP9.05□□□□□ -0.96
VMP1-209ENST00000588915 ALG5Q9Y673 324 aa9.05□□□□□ -0.96
VMP1-209ENST00000588915 RPL7L1Q6DKI1 246 aaKnown RBP9.04□□□□□ -0.96
VMP1-209ENST00000588915 MED28Q9H204 178 aa9.04□□□□□ -0.96
VMP1-209ENST00000588915 A6NHS1 94 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 USP17L23D6RBM5 183 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 LTAP01374 205 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 CXCL1P09341 107 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 MPV17L2Q567V2 206 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 PRR27Q6MZM9 219 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 C15orf54Q8N8G6 183 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 NEXN-AS1Q8NBZ9 246 aa9.03□□□□□ -0.96
VMP1-209ENST00000588915 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.97
VMP1-209ENST00000588915 TMSB15BA0A087X1C1 80 aa9.02□□□□□ -0.97
VMP1-209ENST00000588915 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
VMP1-209ENST00000588915 PRSS1P07477 247 aa9.02□□□□□ -0.97
VMP1-209ENST00000588915 GIPP09681 153 aaPredicted RBP9.02□□□□□ -0.97
VMP1-209ENST00000588915 RPL19P84098 196 aaKnown RBP9.02□□□□□ -0.97
VMP1-209ENST00000588915 AKR1C8PQ5T2L2 129 aa9.02□□□□□ -0.97
VMP1-209ENST00000588915 DAZAP1Q96EP5 407 aaKnown RBP9.02□□□□□ -0.97
VMP1-209ENST00000588915 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
VMP1-209ENST00000588915 VAX2Q9UIW0 290 aa9.02□□□□□ -0.97
VMP1-209ENST00000588915 PTTG1O95997 202 aa9.01□□□□□ -0.97
VMP1-209ENST00000588915 S100A9P06702 114 aaKnown RBP9.01□□□□□ -0.97
VMP1-209ENST00000588915 Q5BKY6 102 aa9.01□□□□□ -0.97
VMP1-209ENST00000588915 CLRN3Q8NCR9 226 aa9.01□□□□□ -0.97
VMP1-209ENST00000588915 CHCHD5Q9BSY4 110 aa9.01□□□□□ -0.97
VMP1-209ENST00000588915 SSBP4Q9BWG4 385 aaPredicted RBP9.01□□□□□ -0.97
VMP1-209ENST00000588915 ZNF471Q9BX82 626 aaPredicted RBP9.01□□□□□ -0.97
VMP1-209ENST00000588915 MAP1LC3B2A6NCE7 125 aa9□□□□□ -0.97
VMP1-209ENST00000588915 ZNF56Q15929 161 aa9□□□□□ -0.97
VMP1-209ENST00000588915 STOML3Q8TAV4 291 aa9□□□□□ -0.97
VMP1-209ENST00000588915 MAP1LC3BQ9GZQ8 125 aa9□□□□□ -0.97
VMP1-209ENST00000588915 SNAI2O43623 268 aa8.99□□□□□ -0.97
VMP1-209ENST00000588915 HLA-DQA1P01909 254 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms