RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SAMD10Q9BYL1 202 aa10.37□□□□□ -0.75
NPC1-207ENST00000588867 TRGV2A0A075B6R0 118 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 APCSP02743 223 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 MT-ND6P03923 174 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 TRGC2P03986 189 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 DPH3P1Q9H4G8 78 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 A8MWV9 139 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 MGPP08493 103 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 SLAQ13239 276 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 KIAA1644Q3SXP7 199 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
NPC1-207ENST00000588867 IGHV3-73A0A0B4J1V6 119 aa10.35□□□□□ -0.75
NPC1-207ENST00000588867 FAM104BQ5XKR9 115 aa10.35□□□□□ -0.75
NPC1-207ENST00000588867 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
NPC1-207ENST00000588867 OR4C5Q8NGB2 326 aa10.35□□□□□ -0.75
NPC1-207ENST00000588867 DKK2Q9UBU2 259 aa10.35□□□□□ -0.75
NPC1-207ENST00000588867 LYRM9A8MSI8 78 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 F5H697 171 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 CRYGDP07320 174 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 RAB4AP20338 218 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 CFAP126Q5VTH2 177 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 IGHV3-53P01767 116 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 SPART-AS1P0CW21 52 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 NDUFAF3Q9BU61 184 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 CELA1Q9UNI1 258 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
NPC1-207ENST00000588867 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
NPC1-207ENST00000588867 RS1O15537 224 aa10.33□□□□□ -0.76
NPC1-207ENST00000588867 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
NPC1-207ENST00000588867 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
NPC1-207ENST00000588867 RNF185Q96GF1 192 aa10.33□□□□□ -0.76
NPC1-207ENST00000588867 ZNF56Q15929 161 aa10.33□□□□□ -0.76
NPC1-207ENST00000588867 ZNF479Q96JC4 524 aa10.33□□□□□ -0.76
NPC1-207ENST00000588867 TRAV26-2A0A0B4J265 109 aa10.32□□□□□ -0.76
NPC1-207ENST00000588867 LINC00315P59091 139 aa10.32□□□□□ -0.76
NPC1-207ENST00000588867 DAD1P61803 113 aa10.32□□□□□ -0.76
NPC1-207ENST00000588867 NACAE9PAV3 2078 aa10.31□□□□□ -0.76
NPC1-207ENST00000588867 TRAV4A0A0B4J268 109 aa10.31□□□□□ -0.76
NPC1-207ENST00000588867 SMKR1H3BMG3 65 aa10.31□□□□□ -0.76
NPC1-207ENST00000588867 C11orf68Q9H3H3 251 aaKnown RBP10.31□□□□□ -0.76
NPC1-207ENST00000588867 CKS2P33552 79 aa10.31□□□□□ -0.76
NPC1-207ENST00000588867 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
NPC1-207ENST00000588867 C1orf196B1AJZ1 125 aa10.3□□□□□ -0.76
NPC1-207ENST00000588867 D6R8Y8 96 aa10.3□□□□□ -0.76
NPC1-207ENST00000588867 RHODO00212 210 aa10.3□□□□□ -0.76
NPC1-207ENST00000588867 NCR2O95944 276 aa10.3□□□□□ -0.76
NPC1-207ENST00000588867 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
NPC1-207ENST00000588867 TENM3Q9P273 2699 aa10.3□□□□□ -0.76
NPC1-207ENST00000588867 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
NPC1-207ENST00000588867 UFSP1Q6NVU6 142 aa10.29□□□□□ -0.76
NPC1-207ENST00000588867 TEX48A0A1B0GUV7 120 aa10.29□□□□□ -0.76
NPC1-207ENST00000588867 GATA1P15976 413 aaPredicted RBP10.29□□□□□ -0.76
NPC1-207ENST00000588867 SRIP30626 198 aa10.29□□□□□ -0.76
NPC1-207ENST00000588867 SUMO4Q6EEV6 95 aa10.29□□□□□ -0.76
NPC1-207ENST00000588867 ZFP2Q6ZN57 461 aa10.29□□□□□ -0.76
NPC1-207ENST00000588867 ORMDL3Q8N138 153 aa10.29□□□□□ -0.76
NPC1-207ENST00000588867 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
NPC1-207ENST00000588867 PHOX2AO14813 284 aa10.28□□□□□ -0.76
NPC1-207ENST00000588867 Q6ZSN1 163 aa10.28□□□□□ -0.76
NPC1-207ENST00000588867 MRAP2Q96G30 205 aa10.28□□□□□ -0.76
NPC1-207ENST00000588867 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
NPC1-207ENST00000588867 PRELID3AQ96N28 172 aa10.28□□□□□ -0.76
NPC1-207ENST00000588867 C18orf15Q96N68 181 aa10.28□□□□□ -0.76
NPC1-207ENST00000588867 ALKBH7Q9BT30 221 aaPredicted RBP10.28□□□□□ -0.76
NPC1-207ENST00000588867 MEGF8Q7Z7M0 2845 aa10.27□□□□□ -0.76
NPC1-207ENST00000588867 PPBPP02775 128 aa10.27□□□□□ -0.77
NPC1-207ENST00000588867 C12orf74Q32Q52 190 aa10.27□□□□□ -0.77
NPC1-207ENST00000588867 C11orf45Q8TAV5 145 aa10.27□□□□□ -0.77
NPC1-207ENST00000588867 HTN3P15516 51 aa10.26□□□□□ -0.77
NPC1-207ENST00000588867 U3KQK5 164 aa10.26□□□□□ -0.77
NPC1-207ENST00000588867 M0QY20 66 aa10.26□□□□□ -0.77
NPC1-207ENST00000588867 CIDEAO60543 219 aa10.26□□□□□ -0.77
NPC1-207ENST00000588867 ATP5G1P05496 136 aa10.26□□□□□ -0.77
NPC1-207ENST00000588867 RAB5BP61020 215 aa10.26□□□□□ -0.77
NPC1-207ENST00000588867 FHL2Q14192 279 aa10.26□□□□□ -0.77
NPC1-207ENST00000588867 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BKO60814 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 NPYP01303 97 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BJP06899 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 P0DMU3 169 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BOP23527 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BBP33778 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BDP58876 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BCP62807 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
NPC1-207ENST00000588867 H7C1H1 209 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 TNFRSF6BO95407 300 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 HOXA5P20719 270 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 S100A12P80511 92 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 OR10J3Q5JRS4 329 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 SLC25A29Q8N8R3 303 aa10.24□□□□□ -0.77
NPC1-207ENST00000588867 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms