RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 IGHV1OR15-1A0A075B7D0 117 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 K7EP34 96 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 IGHV4-59P01825 116 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 GCSHP23434 173 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 CDKN1BP46527 198 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 SCGB2A2Q13296 93 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 Q6YL49 198 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 TRPT1Q86TN4 253 aaKnown RBP5.38□□□□□ -1.55
SPIDR-228ENST00000588781 GTSCR1Q86UQ5 136 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 PCP2Q8IVA1 136 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 CEND1Q8N111 149 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 NEXN-AS1Q8NBZ9 246 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 TIMM17AQ99595 171 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 TM2D2Q9BX73 214 aa5.38□□□□□ -1.55
SPIDR-228ENST00000588781 TRBV25-1A0A075B6N4 114 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 MYMXA0A1B0GTQ4 84 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 E9PLD3 99 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 F5H697 171 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 GNRH2O43555 120 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 GAS8-AS1O95177 125 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 FSHBP01225 129 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 PIK3CD-AS1Q5SR53 167 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 TMEM86BQ8N661 226 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 JMJD8Q96S16 334 aa5.37□□□□□ -1.55
SPIDR-228ENST00000588781 TRAV8-6A0A0B4J262 113 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 TRAV12-3A0A0B4J271 114 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 IGHV3-16A0A0C4DH30 117 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 A0A1W2PPM0 123 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 F6UB75 175 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 H3BUT2 72 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 AVPP01185 164 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 ZNF688P0C7X2 276 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 POLR2KP53803 58 aaKnown RBP5.36□□□□□ -1.55
SPIDR-228ENST00000588781 PMVKQ15126 192 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 SAMD5Q5TGI4 173 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 LYRM7Q5U5X0 104 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 SUMO4Q6EEV6 95 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 WFDC12Q8WWY7 111 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 BAALCQ8WXS3 180 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 PTH2Q96A98 100 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 RPL39LQ96EH5 51 aaKnown RBP5.36□□□□□ -1.55
SPIDR-228ENST00000588781 DUX5Q96PT3 197 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 HIST1H4GQ99525 98 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 SPCS1Q9Y6A9 102 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 KIF25-AS1Q9Y6Z4 181 aa5.36□□□□□ -1.55
SPIDR-228ENST00000588781 A0A096LNT2 108 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 TRBV27A0A0K0K1C4 114 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 GAGE12BA1L429 117 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 PRSS29PA6NIE9 313 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 IGHV4-31P0DP07 118 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 SRD5A1P18405 259 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 HOXD3P31249 432 aaPredicted RBP5.35□□□□□ -1.55
SPIDR-228ENST00000588781 SYNJ2BPP57105 145 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 ZNF56Q15929 161 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 DEFB113Q30KQ7 82 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 NSUN5P1Q3KNT7 163 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 ZFP2Q6ZN57 461 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 Q6ZS46 218 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 LCNL1Q6ZST4 164 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 Q6ZVH6 145 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 Q8N2B8 174 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 CST9LQ9H4G1 147 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 ZNF702PQ9H963 129 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 EDA2RQ9HAV5 297 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 TP73-AS1Q9UF72 201 aa5.35□□□□□ -1.55
SPIDR-228ENST00000588781 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
SPIDR-228ENST00000588781 IGKV2D-26A0A0A0MRZ7 120 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 SDHAF1A6NFY7 115 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 C11orf86A6NJI1 115 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 A8MTW9 85 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 A8MWV9 139 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 CRYBA4P53673 196 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 CMC4P56277 68 aaPredicted RBP5.34□□□□□ -1.55
SPIDR-228ENST00000588781 ZNF415Q09FC8 603 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 TMEM95Q3KNT9 176 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 OCIAD2Q56VL3 154 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 TCTEX1D4Q5JR98 221 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 Q5PR19 223 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 UFSP1Q6NVU6 142 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 Q6ZQT7 251 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 DYNLRB2Q8TF09 96 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 C4orf3Q8WVX3 66 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 RAB37Q96AX2 223 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 RAX2Q96IS3 184 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 LINC00467Q9BRT7 94 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 TP53TG1Q9Y2A0 90 aa5.34□□□□□ -1.55
SPIDR-228ENST00000588781 ZNF256Q9Y2P7 627 aaPredicted RBP5.34□□□□□ -1.55
SPIDR-228ENST00000588781 TRAV25A0A0B4J276 109 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 ZNF815PA8K554 130 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 RNF223E7ERA6 249 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 I3L3M4 83 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 J3QR89 54 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 RHODO00212 210 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 HOXA3O43365 443 aaPredicted RBP5.33□□□□□ -1.56
SPIDR-228ENST00000588781 TCTAP57738 103 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 LINC00315P59091 139 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 SCGB1D4Q6XE38 83 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 CLUHP3Q96NS8 147 aa5.33□□□□□ -1.56
SPIDR-228ENST00000588781 PRADC1Q9BSG0 188 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms