RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 LELP1Q5T871 98 aa11.72□□□□□ -0.53
RFX1-203ENST00000588520 ATP6V0E2Q8NHE4 81 aa11.72□□□□□ -0.53
RFX1-203ENST00000588520 PKD1P98161 4303 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 TRBV10-1A0A0K0K1A3 114 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 A0A1B0GVG6 124 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 C19orf71A6NCJ1 209 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 TMEM250H0YL14 139 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 CRYGDP07320 174 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 LINC00315P59091 139 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 RPL19P84098 196 aaKnown RBP11.71□□□□□ -0.53
RFX1-203ENST00000588520 TNP2Q05952 138 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 FAM74A4Q5TZK3 123 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 WFDC10BQ8IUB3 73 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 SAMD10Q9BYL1 202 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 JPT2Q9H910 190 aa11.71□□□□□ -0.53
RFX1-203ENST00000588520 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
RFX1-203ENST00000588520 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
RFX1-203ENST00000588520 SPANXN1Q5VSR9 72 aa11.7□□□□□ -0.54
RFX1-203ENST00000588520 TRBV20OR9-2A0A075B6H5 130 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 A0A087WWC5 75 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 RAB19A4D1S5 217 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 RBFOX3A6NFN3 312 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 P01737 135 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 Q6ZSN1 163 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 OR10AG1Q8NH19 301 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
RFX1-203ENST00000588520 DYNC1H1Q14204 4646 aaKnown RBP11.68□□□□□ -0.54
RFX1-203ENST00000588520 A0A087WWL8 130 aa11.68□□□□□ -0.54
RFX1-203ENST00000588520 NKX2-5P52952 324 aaPredicted RBP11.68□□□□□ -0.54
RFX1-203ENST00000588520 RAB4BP61018 213 aa11.68□□□□□ -0.54
RFX1-203ENST00000588520 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
RFX1-203ENST00000588520 OR2D3Q8NGH3 330 aa11.68□□□□□ -0.54
RFX1-203ENST00000588520 GAGE12JA6NER3 117 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 F2Z2F3 143 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 IGLC6P0CF74 106 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 CACNG7P62955 275 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 GAGE1Q13065 139 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 GAGE4Q13068 117 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 GAGE5Q13069 117 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 Q6ZRN7 208 aaPredicted RBP11.67□□□□□ -0.54
RFX1-203ENST00000588520 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
RFX1-203ENST00000588520 AP1S3Q96PC3 154 aa11.67□□□□□ -0.54
RFX1-203ENST00000588520 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
RFX1-203ENST00000588520 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
RFX1-203ENST00000588520 OR10G8Q8NGN5 311 aa11.66□□□□□ -0.54
RFX1-203ENST00000588520 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
RFX1-203ENST00000588520 MSRB1Q9NZV6 116 aa11.66□□□□□ -0.54
RFX1-203ENST00000588520 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
RFX1-203ENST00000588520 SMIM17P0DL12 118 aa11.65□□□□□ -0.54
RFX1-203ENST00000588520 ZNF56Q15929 161 aa11.64□□□□□ -0.55
RFX1-203ENST00000588520 WDR73Q6P4I2 378 aa11.64□□□□□ -0.55
RFX1-203ENST00000588520 LAGE3Q14657 143 aa11.63□□□□□ -0.55
RFX1-203ENST00000588520 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.63□□□□□ -0.55
RFX1-203ENST00000588520 FAM210AQ96ND0 272 aa11.63□□□□□ -0.55
RFX1-203ENST00000588520 IBA57-AS1B1ANH7 110 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 EREGO14944 169 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 ERVFC1-1P60608 527 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 UBE2D3P61077 147 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 UBE2D2P62837 147 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 TOR2AQ5JU69 321 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 NUDT10Q8NFP7 164 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 OCC1Q8TAD7 63 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 NUDT11Q96G61 164 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 TPPP3Q9BW30 176 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
RFX1-203ENST00000588520 KIF25-AS1Q9Y6Z4 181 aa11.62□□□□□ -0.55
RFX1-203ENST00000588520 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
RFX1-203ENST00000588520 FAM231DQ6ZW35 169 aa11.61□□□□□ -0.55
RFX1-203ENST00000588520 CNFNQ9BYD5 112 aa11.61□□□□□ -0.55
RFX1-203ENST00000588520 RPP21Q9H633 154 aaKnown RBP11.61□□□□□ -0.55
RFX1-203ENST00000588520 Q9UF83 564 aa11.61□□□□□ -0.55
RFX1-203ENST00000588520 H7C1H1 209 aa11.6□□□□□ -0.55
RFX1-203ENST00000588520 K7EN84 100 aa11.6□□□□□ -0.55
RFX1-203ENST00000588520 GZMBP10144 247 aa11.6□□□□□ -0.55
RFX1-203ENST00000588520 CTRLP40313 264 aa11.6□□□□□ -0.55
RFX1-203ENST00000588520 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
RFX1-203ENST00000588520 C16orf90A8MZG2 172 aa11.59□□□□□ -0.55
RFX1-203ENST00000588520 F5H697 171 aa11.59□□□□□ -0.55
RFX1-203ENST00000588520 TMEM97Q5BJF2 176 aa11.59□□□□□ -0.55
RFX1-203ENST00000588520 CT83Q5H943 113 aa11.59□□□□□ -0.55
RFX1-203ENST00000588520 KIAA1109Q2LD37 5005 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 MUC21A0A0G2JKD1 596 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 MUC21A0A140T8X8 626 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 TEX261Q6UWH6 196 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 LYZL1Q6UWQ5 148 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 NEXN-AS1Q8NBZ9 246 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 DNAJC30Q96LL9 226 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 SMIM7Q9BQ49 75 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
RFX1-203ENST00000588520 SMDT1Q9H4I9 107 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 URGCP-MRPS24S4R325 110 aa11.58□□□□□ -0.56
RFX1-203ENST00000588520 TRAV8-3A0A0A6YYJ7 113 aa11.57□□□□□ -0.56
RFX1-203ENST00000588520 PKIAP61925 76 aa11.57□□□□□ -0.56
RFX1-203ENST00000588520 CDPF1Q6NVV7 123 aa11.57□□□□□ -0.56
RFX1-203ENST00000588520 DAZ4Q86SG3 579 aaKnown RBP11.57□□□□□ -0.56
RFX1-203ENST00000588520 DAZ3Q9NR90 486 aaKnown RBP11.57□□□□□ -0.56
RFX1-203ENST00000588520 PGPEP1Q9NXJ5 209 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms