RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GAGE12BA1L429 117 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 GAGE7O76087 117 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 CRYGDP07320 174 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 MGPP08493 103 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 GAGE12FP0CL80 117 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 GAGE12GP0CL81 117 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 GAGE12IP0CL82 117 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 RAB4AP20338 218 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 LINC00315P59091 139 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
VMP1-207ENST00000588131 PIK3CD-AS1Q5SR53 167 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 SMIM15Q7Z3B0 74 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 DPH3P1Q9H4G8 78 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 MGAM2Q2M2H8 2515 aa8.07□□□□□ -1.12
VMP1-207ENST00000588131 SMKR1H3BMG3 65 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 RS1O15537 224 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 GAS8-AS1O95177 125 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 LGALS9BQ3B8N2 356 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 FAM74A4Q5TZK3 123 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 FAM222AQ5U5X8 452 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 CFAP126Q5VTH2 177 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 LINC00612Q8N6U2 182 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 SPATA25Q9BR10 227 aa8.06□□□□□ -1.12
VMP1-207ENST00000588131 DNAH9Q9NYC9 4486 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 NOTCH1P46531 2555 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 IGHV3-73A0A0B4J1V6 119 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 TRAV26-2A0A0B4J265 109 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 A8MWV9 139 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 C1orf196B1AJZ1 125 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 NCR2O95944 276 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 SMIM17P0DL12 118 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 NDUFAF3Q9BU61 184 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 DKK2Q9UBU2 259 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 CELA1Q9UNI1 258 aa8.05□□□□□ -1.12
VMP1-207ENST00000588131 D6R8Y8 96 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 IGHV3-53P01767 116 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 DEFB130BP0DP73 79 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 DEFB130AP0DP74 79 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 GATA1P15976 413 aaPredicted RBP8.04□□□□□ -1.12
VMP1-207ENST00000588131 SRIP30626 198 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 DEFA6Q01524 100 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 ZNF479Q96JC4 524 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 ALKBH7Q9BT30 221 aaPredicted RBP8.04□□□□□ -1.12
VMP1-207ENST00000588131 TMA7Q9Y2S6 64 aaKnown RBP8.04□□□□□ -1.12
VMP1-207ENST00000588131 U3KQK5 164 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
VMP1-207ENST00000588131 TRGV2A0A075B6R0 118 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 TRAV4A0A0B4J268 109 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 LYRM9A8MSI8 78 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 ZNF56Q15929 161 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
VMP1-207ENST00000588131 SUMO4Q6EEV6 95 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 Q6ZSN1 163 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 B9D2Q9BPU9 175 aa8.03□□□□□ -1.12
VMP1-207ENST00000588131 A0A0J9YWU9 116 aa8.02□□□□□ -1.13
VMP1-207ENST00000588131 F5H697 171 aa8.02□□□□□ -1.13
VMP1-207ENST00000588131 CKS2P33552 79 aa8.02□□□□□ -1.13
VMP1-207ENST00000588131 RAB5BP61020 215 aa8.02□□□□□ -1.13
VMP1-207ENST00000588131 ORMDL3Q8N138 153 aa8.02□□□□□ -1.13
VMP1-207ENST00000588131 MRAP2Q96G30 205 aa8.02□□□□□ -1.13
VMP1-207ENST00000588131 C11orf68Q9H3H3 251 aaKnown RBP8.02□□□□□ -1.13
VMP1-207ENST00000588131 RHODO00212 210 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 NPYP01303 97 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 SPART-AS1P0CW21 52 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 IQCJQ1A5X6 159 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 ZFP2Q6ZN57 461 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 NRACQ8N912 160 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 RPL39LQ96EH5 51 aaKnown RBP8.01□□□□□ -1.13
VMP1-207ENST00000588131 PRELID3AQ96N28 172 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 C18orf15Q96N68 181 aa8.01□□□□□ -1.13
VMP1-207ENST00000588131 M0QY20 66 aa8□□□□□ -1.13
VMP1-207ENST00000588131 PPBPP02775 128 aa8□□□□□ -1.13
VMP1-207ENST00000588131 DAD1P61803 113 aa8□□□□□ -1.13
VMP1-207ENST00000588131 LINC00528Q8N1L1 170 aa8□□□□□ -1.13
VMP1-207ENST00000588131 C18orf32Q8TCD1 76 aa8□□□□□ -1.13
VMP1-207ENST00000588131 ZMAT4Q9H898 229 aa8□□□□□ -1.13
VMP1-207ENST00000588131 PGPEP1Q9NXJ5 209 aa8□□□□□ -1.13
VMP1-207ENST00000588131 TNFRSF6BO95407 300 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 P0DMU3 169 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 FAM231AP0DMU4 169 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 FAM231CP0DMU5 169 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 FHL2Q14192 279 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 C12orf74Q32Q52 190 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 EDA2RQ9HAV5 297 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 Q9UF83 564 aa7.99□□□□□ -1.13
VMP1-207ENST00000588131 TEX48A0A1B0GUV7 120 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms