RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 FXYD5Q96DB9 178 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 C2orf16Q68DN1 1984 aa4.14□□□□□ -1.75
LINC01538-201ENST00000588074 UBE2L6O14933 153 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV3-9P01782 118 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 LCE3BQ5TA77 95 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 MYO7AQ13402 2215 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 UNC80Q8N2C7 3258 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGLV2-18A0A075B6J9 118 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV3OR16-10A0A075B7F0 116 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGLV3-32A0A0A0MS00 114 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV3-20A0A0C4DH32 117 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 TRBV10-3A0A0K0K1G6 114 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 STATHP02808 62 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 SPINK9Q5DT21 86 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 SPTSSAQ969W0 71 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 VCANP13611 3396 aa4.13□□□□□ -1.75
LINC01538-201ENST00000588074 TNRC18O15417 2968 aaPredicted RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 SPTBN5Q9NRC6 3674 aaKnown RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 H7C2G1 150 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 UBE2BP63146 152 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 ESRGQ1W209 222 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 NRACQ8N912 160 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 LINC00588Q9Y4M8 146 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 EML6Q6ZMW3 1958 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 A0A0J9YX75 114 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 LOC100131303A0A0U1RQF7 123 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 E7EUB6 86 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 FAM53AQ6NSI3 398 aaPredicted RBP4.12□□□□□ -1.75
LINC01538-201ENST00000588074 ZNF826PQ6ZT77 177 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 GGNQ86UU5 652 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 MPLKIPQ8TAP9 179 aa4.12□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV4OR15-8A0A075B7B6 117 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 TRAV8-3A0A0A6YYJ7 113 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 ZNF73O43830 326 aaPredicted RBP4.11□□□□□ -1.75
LINC01538-201ENST00000588074 Q1T7F1 81 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 CLLU1OSQ5K130 101 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 C10orf113Q5VZT2 155 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 LYZL1Q6UWQ5 148 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 PHF5AQ7RTV0 110 aaKnown RBP4.11□□□□□ -1.75
LINC01538-201ENST00000588074 VN1R4Q7Z5H5 301 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 VMO1Q7Z5L0 202 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 SDHAF1A6NFY7 115 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 C17orf98A8MV24 154 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 F8WEM9 126 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 DNAL4O96015 105 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 Q8IYB0 196 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 RNF185Q96GF1 192 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 CEP290O15078 2479 aa4.11□□□□□ -1.75
LINC01538-201ENST00000588074 A0A087WVE0 104 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 IGKV3D-7A0A0C4DH55 119 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 LY6G6EA0A0G2JKS1 128 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 C11orf86A6NJI1 115 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 TMEM256-PLSCR3K7ERE1 68 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 BLCAPP62952 87 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 MUSTN1Q8IVN3 82 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 TOMM6Q96B49 74 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 PRUNE2Q8WUY3 3088 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 CHD7Q9P2D1 2997 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 GON4LQ3T8J9 2241 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 IGHV1OR21-1A0A087WYE8 117 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 DEFB134Q4QY38 66 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 LINC00242Q5T6M2 205 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 MORN5Q5VZ52 161 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 KLHL30-AS1Q8NEE0 82 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 DYNLRB2Q8TF09 96 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 CLEC2BQ92478 149 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 AMELXQ99217 191 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 TIMM17AQ99595 171 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 CNFNQ9BYD5 112 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 SPRR3Q9UBC9 169 aa4.1□□□□□ -1.75
LINC01538-201ENST00000588074 DOCK7Q96N67 2140 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 E7EQL1 145 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 J3QT63 122 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 M0R3E3 92 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 FSTL3O95633 263 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 IGLV2-11P01706 119 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 REG3GQ6UW15 175 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 SCGB3A1Q96QR1 104 aa4.09□□□□□ -1.75
LINC01538-201ENST00000588074 COL4A6Q14031 1691 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 IGKV1D-17A0A075B6S4 117 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 I3L3M4 83 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 ZNF876PQ49A33 203 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 Q6ZRP5 223 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 LCA10Q71F78 164 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 IMMP1LQ96LU5 166 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 CTSZQ9UBR2 303 aa4.09□□□□□ -1.76
LINC01538-201ENST00000588074 COX7A2LO14548 114 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 PROP1O75360 226 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 IGLV3-21P80748 117 aaPredicted RBP4.08□□□□□ -1.76
LINC01538-201ENST00000588074 C2orf83Q53S99 150 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 PRNTQ86SH4 94 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 C14orf178Q8N769 122 aaPredicted RBP4.08□□□□□ -1.76
LINC01538-201ENST00000588074 BPESC1Q9GZL8 116 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 COL6A3P12111 3177 aa4.08□□□□□ -1.76
LINC01538-201ENST00000588074 TNRC6BQ9UPQ9 1833 aaKnown RBP4.08□□□□□ -1.76
LINC01538-201ENST00000588074 IGKV1OR2-108A0A075B7D4 117 aa4.07□□□□□ -1.76
LINC01538-201ENST00000588074 EPOPA6NHQ4 379 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms