RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 LAGE3Q14657 143 aa9.52□□□□□ -0.89
VMP1-206ENST00000587945 DNLZQ5SXM8 178 aa9.52□□□□□ -0.89
VMP1-206ENST00000587945 COX8CQ7Z4L0 72 aa9.52□□□□□ -0.89
VMP1-206ENST00000587945 FMC1Q96HJ9 113 aa9.52□□□□□ -0.89
VMP1-206ENST00000587945 TM2D2Q9BX73 214 aa9.52□□□□□ -0.89
VMP1-206ENST00000587945 M0R381 172 aa9.51□□□□□ -0.89
VMP1-206ENST00000587945 ZNF674Q2M3X9 581 aa9.51□□□□□ -0.89
VMP1-206ENST00000587945 TMEM70Q9BUB7 260 aa9.51□□□□□ -0.89
VMP1-206ENST00000587945 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
VMP1-206ENST00000587945 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
VMP1-206ENST00000587945 RHODO00212 210 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 LTAP01374 205 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 TPT1P13693 172 aaKnown RBP9.5□□□□□ -0.89
VMP1-206ENST00000587945 AKR1C3P42330 323 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 RGS21Q2M5E4 152 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 STOML3Q8TAV4 291 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 SFRP2Q96HF1 295 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 DNAJC30Q96LL9 226 aa9.5□□□□□ -0.89
VMP1-206ENST00000587945 A0A087WWC5 75 aa9.49□□□□□ -0.89
VMP1-206ENST00000587945 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
VMP1-206ENST00000587945 TRBV6-1A0A0K0K1D8 114 aa9.49□□□□□ -0.89
VMP1-206ENST00000587945 A0A1B0GV50 99 aa9.49□□□□□ -0.89
VMP1-206ENST00000587945 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
VMP1-206ENST00000587945 PAGE4O60829 102 aa9.49□□□□□ -0.89
VMP1-206ENST00000587945 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
VMP1-206ENST00000587945 NIT1Q86X76 327 aa9.48□□□□□ -0.89
VMP1-206ENST00000587945 BAALCQ8WXS3 180 aa9.48□□□□□ -0.89
VMP1-206ENST00000587945 RPL19P84098 196 aaKnown RBP9.47□□□□□ -0.89
VMP1-206ENST00000587945 TOR2AQ5JU69 321 aa9.47□□□□□ -0.89
VMP1-206ENST00000587945 ZFP82Q8N141 532 aa9.47□□□□□ -0.89
VMP1-206ENST00000587945 KCNRGQ8N5I3 272 aa9.47□□□□□ -0.89
VMP1-206ENST00000587945 FAM213BQ8TBF2 198 aa9.47□□□□□ -0.89
VMP1-206ENST00000587945 SFT2D1Q8WV19 159 aa9.47□□□□□ -0.89
VMP1-206ENST00000587945 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
VMP1-206ENST00000587945 KLK12Q9UKR0 248 aa9.47□□□□□ -0.89
VMP1-206ENST00000587945 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.9
VMP1-206ENST00000587945 LINC01620Q4KN68 170 aa9.46□□□□□ -0.9
VMP1-206ENST00000587945 MBD3L1Q8WWY6 194 aa9.46□□□□□ -0.9
VMP1-206ENST00000587945 URGCP-MRPS24S4R325 110 aa9.46□□□□□ -0.9
VMP1-206ENST00000587945 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
VMP1-206ENST00000587945 MUC21A0A0G2JKD1 596 aa9.45□□□□□ -0.9
VMP1-206ENST00000587945 MUC21A0A140T8X8 626 aa9.45□□□□□ -0.9
VMP1-206ENST00000587945 UBE2WQ96B02 151 aa9.45□□□□□ -0.9
VMP1-206ENST00000587945 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
VMP1-206ENST00000587945 TRBV10-1A0A0K0K1A3 114 aa9.44□□□□□ -0.9
VMP1-206ENST00000587945 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
VMP1-206ENST00000587945 UBE2D3P61077 147 aa9.44□□□□□ -0.9
VMP1-206ENST00000587945 UBE2D2P62837 147 aa9.44□□□□□ -0.9
VMP1-206ENST00000587945 RPL36AP83881 106 aaKnown RBP9.44□□□□□ -0.9
VMP1-206ENST00000587945 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
VMP1-206ENST00000587945 OR10AG1Q8NH19 301 aa9.44□□□□□ -0.9
VMP1-206ENST00000587945 RPL36ALQ969Q0 106 aaKnown RBP9.44□□□□□ -0.9
VMP1-206ENST00000587945 ZNF471Q9BX82 626 aaPredicted RBP9.44□□□□□ -0.9
VMP1-206ENST00000587945 SRRM2Q9UQ35 2752 aaKnown RBP9.43□□□□□ -0.9
VMP1-206ENST00000587945 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
VMP1-206ENST00000587945 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 A0A087WX48 190 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 C1QBP02746 253 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 SSTP61278 116 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 ZNF345Q14585 488 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 Q6ZSA8 131 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 RMI2Q96E14 147 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 MLST8Q9BVC4 326 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 COX11Q9Y6N1 276 aa9.43□□□□□ -0.9
VMP1-206ENST00000587945 UMAD1C9J7I0 102 aa9.42□□□□□ -0.9
VMP1-206ENST00000587945 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
VMP1-206ENST00000587945 PFDN1O60925 122 aa9.42□□□□□ -0.9
VMP1-206ENST00000587945 S100A9P06702 114 aaKnown RBP9.42□□□□□ -0.9
VMP1-206ENST00000587945 ZNF56Q15929 161 aa9.42□□□□□ -0.9
VMP1-206ENST00000587945 PRR27Q6MZM9 219 aa9.42□□□□□ -0.9
VMP1-206ENST00000587945 NEXN-AS1Q8NBZ9 246 aa9.42□□□□□ -0.9
VMP1-206ENST00000587945 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
VMP1-206ENST00000587945 HMSDA8MTL9 139 aa9.41□□□□□ -0.9
VMP1-206ENST00000587945 BCL2L11O43521 198 aa9.41□□□□□ -0.9
VMP1-206ENST00000587945 H2AFB1P0C5Y9 115 aa9.41□□□□□ -0.9
VMP1-206ENST00000587945 RAB4BP61018 213 aa9.41□□□□□ -0.9
VMP1-206ENST00000587945 KCNIP4Q6PIL6 250 aa9.41□□□□□ -0.9
VMP1-206ENST00000587945 OR10G8Q8NGN5 311 aa9.41□□□□□ -0.9
VMP1-206ENST00000587945 TRBV6-8A0A0A6YYG3 113 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 A0A0D9SG52 128 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 KANTRA0A1W2PQU2 76 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 SNAI2O43623 268 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 CXCL1P09341 107 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 CCL20P78556 96 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 ELOBQ15370 118 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 SPANXN1Q5VSR9 72 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 TMUB2Q71RG4 321 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 Q8N976 141 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 CHCHD7Q9BUK0 85 aa9.4□□□□□ -0.9
VMP1-206ENST00000587945 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
VMP1-206ENST00000587945 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
VMP1-206ENST00000587945 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
VMP1-206ENST00000587945 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
VMP1-206ENST00000587945 C15orf54Q8N8G6 183 aa9.39□□□□□ -0.91
VMP1-206ENST00000587945 DERL1Q9BUN8 251 aa9.39□□□□□ -0.91
VMP1-206ENST00000587945 F5H697 171 aa9.38□□□□□ -0.91
VMP1-206ENST00000587945 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
VMP1-206ENST00000587945 MPV17L2Q567V2 206 aa9.38□□□□□ -0.91
VMP1-206ENST00000587945 ATRAIDQ6UW56 229 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms