RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 LINC00479Q96M42 142 aa10.01□□□□□ -0.81
VAPA-209ENST00000585042 VPS13BQ7Z7G8 4022 aa10.01□□□□□ -0.81
VAPA-209ENST00000585042 PGPEP1LA6NFU8 196 aa10□□□□□ -0.81
VAPA-209ENST00000585042 IFNA1P01562 189 aa10□□□□□ -0.81
VAPA-209ENST00000585042 ZNF80P51504 273 aaPredicted RBP10□□□□□ -0.81
VAPA-209ENST00000585042 Q9HAA7 133 aa10□□□□□ -0.81
VAPA-209ENST00000585042 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
VAPA-209ENST00000585042 TRAV8-3A0A0A6YYJ7 113 aa9.99□□□□□ -0.81
VAPA-209ENST00000585042 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
VAPA-209ENST00000585042 RNASE3P12724 160 aaKnown RBP9.99□□□□□ -0.81
VAPA-209ENST00000585042 ZNF506Q5JVG8 444 aa9.99□□□□□ -0.81
VAPA-209ENST00000585042 Q86TA4 180 aa9.99□□□□□ -0.81
VAPA-209ENST00000585042 GNG13Q9P2W3 67 aa9.99□□□□□ -0.81
VAPA-209ENST00000585042 A0A087WWC5 75 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 TRBV6-1A0A0K0K1D8 114 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 A8MWV9 139 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 IGHV3-30P01768 117 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 IGHV3-30-5P0DP03 117 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 TOR2AQ5JU69 321 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 COX11Q9Y6N1 276 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 FAT1Q14517 4588 aa9.98□□□□□ -0.81
VAPA-209ENST00000585042 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
VAPA-209ENST00000585042 IGHV3-73A0A0B4J1V6 119 aa9.97□□□□□ -0.81
VAPA-209ENST00000585042 TAGLN2P37802 199 aaKnown RBP9.97□□□□□ -0.81
VAPA-209ENST00000585042 LTAP01374 205 aa9.96□□□□□ -0.82
VAPA-209ENST00000585042 PLA2G1BP04054 148 aaKnown RBP9.96□□□□□ -0.82
VAPA-209ENST00000585042 BLOC1S1P78537 153 aa9.96□□□□□ -0.82
VAPA-209ENST00000585042 FAM162BQ5T6X4 162 aa9.96□□□□□ -0.82
VAPA-209ENST00000585042 Q6ZSA8 131 aa9.96□□□□□ -0.82
VAPA-209ENST00000585042 COX8CQ7Z4L0 72 aa9.96□□□□□ -0.82
VAPA-209ENST00000585042 FAM30AQ9NZY2 134 aa9.96□□□□□ -0.82
VAPA-209ENST00000585042 LINC00694P0DN24 101 aa9.95□□□□□ -0.82
VAPA-209ENST00000585042 S100A4P26447 101 aaKnown RBP9.95□□□□□ -0.82
VAPA-209ENST00000585042 CCL20P78556 96 aa9.95□□□□□ -0.82
VAPA-209ENST00000585042 PARLQ9H300 379 aa9.95□□□□□ -0.82
VAPA-209ENST00000585042 SCO2A0A1W2PP80 73 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 PDE6DO43924 150 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 HAMPP81172 84 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 DNLZQ5SXM8 178 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 ALKAL2Q6UX46 152 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 BAGE2Q86Y30 109 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 ZC2HC1AQ96GY0 325 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 IL36BQ9NZH7 164 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
VAPA-209ENST00000585042 IGKV3D-20A0A0C4DH25 116 aa9.93□□□□□ -0.82
VAPA-209ENST00000585042 B4DEV8 164 aa9.93□□□□□ -0.82
VAPA-209ENST00000585042 ASIPP42127 132 aa9.93□□□□□ -0.82
VAPA-209ENST00000585042 NKX2-5P52952 324 aaPredicted RBP9.93□□□□□ -0.82
VAPA-209ENST00000585042 MEF2BQ02080 365 aaPredicted RBP9.93□□□□□ -0.82
VAPA-209ENST00000585042 UFSP1Q6NVU6 142 aa9.93□□□□□ -0.82
VAPA-209ENST00000585042 RMI2Q96E14 147 aa9.93□□□□□ -0.82
VAPA-209ENST00000585042 GAGE12JA6NER3 117 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 RHODO00212 210 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 SH2D1AO60880 128 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 BCL2P10415 239 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 GAGE1Q13065 139 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 GAGE4Q13068 117 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 GAGE5Q13069 117 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 GAGE13Q4V321 117 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 C11orf52Q96A22 123 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 VAX2Q9UIW0 290 aa9.92□□□□□ -0.82
VAPA-209ENST00000585042 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
VAPA-209ENST00000585042 ZNF674Q2M3X9 581 aa9.91□□□□□ -0.82
VAPA-209ENST00000585042 DAZ4Q86SG3 579 aaKnown RBP9.91□□□□□ -0.82
VAPA-209ENST00000585042 Q8N976 141 aa9.91□□□□□ -0.82
VAPA-209ENST00000585042 SYT8Q8NBV8 401 aa9.91□□□□□ -0.82
VAPA-209ENST00000585042 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
VAPA-209ENST00000585042 DAZ3Q9NR90 486 aaKnown RBP9.91□□□□□ -0.82
VAPA-209ENST00000585042 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
VAPA-209ENST00000585042 KRTAP29-1A8MX34 341 aaPredicted RBP9.9□□□□□ -0.82
VAPA-209ENST00000585042 KRBOX1C9JBD0 128 aa9.9□□□□□ -0.82
VAPA-209ENST00000585042 M0R036 132 aa9.9□□□□□ -0.82
VAPA-209ENST00000585042 CRIP1P50238 77 aa9.9□□□□□ -0.82
VAPA-209ENST00000585042 WFDC2Q14508 124 aa9.9□□□□□ -0.82
VAPA-209ENST00000585042 CHCHD7Q9BUK0 85 aa9.9□□□□□ -0.82
VAPA-209ENST00000585042 URGCP-MRPS24S4R325 110 aa9.9□□□□□ -0.82
VAPA-209ENST00000585042 ELOBQ15370 118 aa9.89□□□□□ -0.83
VAPA-209ENST00000585042 NIT1Q86X76 327 aa9.89□□□□□ -0.83
VAPA-209ENST00000585042 Q8N3U1 123 aa9.89□□□□□ -0.83
VAPA-209ENST00000585042 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
VAPA-209ENST00000585042 GNG4P50150 75 aa9.88□□□□□ -0.83
VAPA-209ENST00000585042 PRR27Q6MZM9 219 aa9.88□□□□□ -0.83
VAPA-209ENST00000585042 C14orf178Q8N769 122 aaPredicted RBP9.88□□□□□ -0.83
VAPA-209ENST00000585042 DAZAP1Q96EP5 407 aaKnown RBP9.88□□□□□ -0.83
VAPA-209ENST00000585042 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
VAPA-209ENST00000585042 MLST8Q9BVC4 326 aa9.88□□□□□ -0.83
VAPA-209ENST00000585042 SAMD10Q9BYL1 202 aa9.88□□□□□ -0.83
VAPA-209ENST00000585042 JPT2Q9H910 190 aa9.88□□□□□ -0.83
VAPA-209ENST00000585042 Q9UF83 564 aa9.88□□□□□ -0.83
VAPA-209ENST00000585042 TRBV10-1A0A0K0K1A3 114 aa9.87□□□□□ -0.83
VAPA-209ENST00000585042 ARMS2P0C7Q2 107 aa9.87□□□□□ -0.83
VAPA-209ENST00000585042 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
VAPA-209ENST00000585042 SFRP2Q96HF1 295 aa9.87□□□□□ -0.83
VAPA-209ENST00000585042 PHLDA3Q9Y5J5 127 aa9.87□□□□□ -0.83
VAPA-209ENST00000585042 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.86□□□□□ -0.83
VAPA-209ENST00000585042 TMSB15BA0A087X1C1 80 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 GRIFINA4D1Z8 144 aa9.86□□□□□ -0.83
VAPA-209ENST00000585042 RBFOX3A6NFN3 312 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms