RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 FAM231DQ6ZW35 169 aa12.14□□□□□ -0.47
TOP3A-220ENST00000585031 C11orf72Q8NBR9 251 aa12.14□□□□□ -0.47
TOP3A-220ENST00000585031 GSN-AS1Q9NRJ2 163 aa12.14□□□□□ -0.47
TOP3A-220ENST00000585031 TRAV9-1A0A075B6T8 112 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 TRAV12-3A0A0B4J271 114 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 OXTP01178 125 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 PRNTQ86SH4 94 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 IL36BQ9NZH7 164 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 ZNF492Q9P255 531 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 PSG8Q9UQ74 426 aa12.13□□□□□ -0.47
TOP3A-220ENST00000585031 TRGV2A0A075B6R0 118 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 RBAKDNA6NC62 111 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 M0R3E3 92 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 PAX4O43316 350 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 GATCO43716 136 aaKnown RBP12.12□□□□□ -0.47
TOP3A-220ENST00000585031 RAB5BP61020 215 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 LINC00528Q8N1L1 170 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 NHLRC2Q8NBF2 726 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 DAZAP1Q96EP5 407 aaKnown RBP12.12□□□□□ -0.47
TOP3A-220ENST00000585031 LINC00467Q9BRT7 94 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 ICOSQ9Y6W8 199 aa12.12□□□□□ -0.47
TOP3A-220ENST00000585031 TGIF2-C20orf24A0A0A6YYL0 155 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 CT45A10P0DMU9 189 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
TOP3A-220ENST00000585031 KRTAP10-4P60372 401 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-220ENST00000585031 SAPCD1Q5SSQ6 148 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 SGK494Q96LW2 274 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 MLST8Q9BVC4 326 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 V9GYV3 84 aa12.11□□□□□ -0.47
TOP3A-220ENST00000585031 TRAV8-1A0A0A6YYK1 113 aa12.1□□□□□ -0.47
TOP3A-220ENST00000585031 NPIPB6E9PJ23 425 aa12.1□□□□□ -0.47
TOP3A-220ENST00000585031 IGLV2-11P01706 119 aa12.1□□□□□ -0.47
TOP3A-220ENST00000585031 IGHV3-53P01767 116 aa12.1□□□□□ -0.47
TOP3A-220ENST00000585031 CXCL1P09341 107 aa12.1□□□□□ -0.47
TOP3A-220ENST00000585031 PRR27Q6MZM9 219 aa12.1□□□□□ -0.47
TOP3A-220ENST00000585031 NTN5Q8WTR8 489 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-220ENST00000585031 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
TOP3A-220ENST00000585031 TRGV1A0A0A0MS02 117 aa12.09□□□□□ -0.47
TOP3A-220ENST00000585031 LRP2P98164 4655 aa12.09□□□□□ -0.47
TOP3A-220ENST00000585031 TRAV9-2A0A087WT02 112 aa12.08□□□□□ -0.48
TOP3A-220ENST00000585031 IGKV2-40A0A087WW87 121 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-220ENST00000585031 IGKV2D-40P01614 121 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-220ENST00000585031 P01737 135 aa12.08□□□□□ -0.48
TOP3A-220ENST00000585031 CRYBA4P53673 196 aa12.08□□□□□ -0.48
TOP3A-220ENST00000585031 NUDT10Q8NFP7 164 aa12.08□□□□□ -0.48
TOP3A-220ENST00000585031 NUDT11Q96G61 164 aa12.08□□□□□ -0.48
TOP3A-220ENST00000585031 K7EP13 123 aa12.07□□□□□ -0.48
TOP3A-220ENST00000585031 SPINK4O60575 86 aa12.07□□□□□ -0.48
TOP3A-220ENST00000585031 TYMSP04818 313 aa12.07□□□□□ -0.48
TOP3A-220ENST00000585031 FHL2Q14192 279 aa12.07□□□□□ -0.48
TOP3A-220ENST00000585031 CT83Q5H943 113 aa12.07□□□□□ -0.48
TOP3A-220ENST00000585031 Q6ZSA8 131 aa12.07□□□□□ -0.48
TOP3A-220ENST00000585031 C8orf49Q96NF6 230 aa12.07□□□□□ -0.48
TOP3A-220ENST00000585031 RPP21Q9H633 154 aaKnown RBP12.07□□□□□ -0.48
TOP3A-220ENST00000585031 COX19Q49B96 90 aa12.06□□□□□ -0.48
TOP3A-220ENST00000585031 TMEM78Q5T7P6 136 aa12.06□□□□□ -0.48
TOP3A-220ENST00000585031 Q8N814 137 aa12.06□□□□□ -0.48
TOP3A-220ENST00000585031 PRO0255Q9UI72 69 aa12.06□□□□□ -0.48
TOP3A-220ENST00000585031 C19orf71A6NCJ1 209 aa12.05□□□□□ -0.48
TOP3A-220ENST00000585031 A8MWL6 223 aa12.05□□□□□ -0.48
TOP3A-220ENST00000585031 Q6ZQT7 251 aa12.05□□□□□ -0.48
TOP3A-220ENST00000585031 COX8CQ7Z4L0 72 aa12.05□□□□□ -0.48
TOP3A-220ENST00000585031 HHLA3Q9XRX5 114 aa12.05□□□□□ -0.48
TOP3A-220ENST00000585031 SMIM27A0A1W2PRY6 76 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 CRYGDP07320 174 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 EVI2AP22794 236 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 MRPL23Q16540 153 aaKnown RBP12.04□□□□□ -0.48
TOP3A-220ENST00000585031 SMUG1Q53HV7 270 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 NEGR1Q7Z3B1 354 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 TSKUQ8WUA8 353 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 ZC2HC1AQ96GY0 325 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 VGLL1Q99990 258 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 MRPL16Q9NX20 251 aaKnown RBP12.04□□□□□ -0.48
TOP3A-220ENST00000585031 TP53TG3Q9ULZ0 132 aa12.04□□□□□ -0.48
TOP3A-220ENST00000585031 ZNF138P52744 262 aa12.03□□□□□ -0.48
TOP3A-220ENST00000585031 WFDC2Q14508 124 aa12.03□□□□□ -0.48
TOP3A-220ENST00000585031 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
TOP3A-220ENST00000585031 NAT8BQ9UHF3 227 aa12.03□□□□□ -0.48
TOP3A-220ENST00000585031 LENEPQ9Y5L5 61 aa12.03□□□□□ -0.48
TOP3A-220ENST00000585031 XKRY2A2RUG3 117 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 FAM231BA6NCW3 169 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 K7EQD1 137 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 LEPP41159 167 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 TCL1AP56279 114 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 ODF3Q96PU9 254 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 GFRA4Q9GZZ7 299 aa12.02□□□□□ -0.49
TOP3A-220ENST00000585031 TNXBP22105 4242 aa12.01□□□□□ -0.49
TOP3A-220ENST00000585031 S100A6P06703 90 aa12.01□□□□□ -0.49
TOP3A-220ENST00000585031 ERCC8Q13216 396 aa12.01□□□□□ -0.49
TOP3A-220ENST00000585031 ANXA2RQ3ZCQ2 193 aa12.01□□□□□ -0.49
TOP3A-220ENST00000585031 WDR73Q6P4I2 378 aa12.01□□□□□ -0.49
TOP3A-220ENST00000585031 ZFP82Q8N141 532 aa12.01□□□□□ -0.49
TOP3A-220ENST00000585031 OR2D3Q8NGH3 330 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms