RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 PDE6DO43924 150 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 IFNA1P01562 189 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 MGST1P10620 155 aaKnown RBP11.58□□□□□ -0.56
ITGB4-213ENST00000584939 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 PIK3CD-AS1Q5SR53 167 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 DMRTA1Q5VZB9 504 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 Q6ZSN1 163 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 PARLQ9H300 379 aa11.58□□□□□ -0.56
ITGB4-213ENST00000584939 A0A087WTM6 91 aa11.57□□□□□ -0.56
ITGB4-213ENST00000584939 A8MWV9 139 aa11.57□□□□□ -0.56
ITGB4-213ENST00000584939 FUSP35637 526 aaKnown RBP eCLIP11.57□□□□□ -0.56
ITGB4-213ENST00000584939 OR10J3Q5JRS4 329 aa11.57□□□□□ -0.56
ITGB4-213ENST00000584939 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
ITGB4-213ENST00000584939 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
ITGB4-213ENST00000584939 LINC01556Q5JQF7 62 aa11.56□□□□□ -0.56
ITGB4-213ENST00000584939 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
ITGB4-213ENST00000584939 ATP6V0E2Q8NHE4 81 aa11.56□□□□□ -0.56
ITGB4-213ENST00000584939 MED9Q9NWA0 146 aa11.56□□□□□ -0.56
ITGB4-213ENST00000584939 LRP1BQ9NZR2 4599 aa11.55□□□□□ -0.56
ITGB4-213ENST00000584939 CXCL1P09341 107 aa11.55□□□□□ -0.56
ITGB4-213ENST00000584939 LELP1Q5T871 98 aa11.55□□□□□ -0.56
ITGB4-213ENST00000584939 PRR27Q6MZM9 219 aa11.55□□□□□ -0.56
ITGB4-213ENST00000584939 GTSF1LQ9H1H1 148 aa11.55□□□□□ -0.56
ITGB4-213ENST00000584939 RBFOX3A6NFN3 312 aa11.54□□□□□ -0.56
ITGB4-213ENST00000584939 TAGLN2P37802 199 aaKnown RBP11.54□□□□□ -0.56
ITGB4-213ENST00000584939 CDPF1Q6NVV7 123 aa11.54□□□□□ -0.56
ITGB4-213ENST00000584939 SSBP4Q9BWG4 385 aaPredicted RBP11.54□□□□□ -0.56
ITGB4-213ENST00000584939 Q9UF83 564 aa11.54□□□□□ -0.56
ITGB4-213ENST00000584939 HSPG2P98160 4391 aa11.54□□□□□ -0.56
ITGB4-213ENST00000584939 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 IBA57-AS1B1ANH7 110 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 SNAI2O43623 268 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 GAGE1Q13065 139 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 GAGE4Q13068 117 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 GAGE5Q13069 117 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 Q8N1X5 172 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 SYT8Q8NBV8 401 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 SMIM12Q96EX1 92 aa11.53□□□□□ -0.56
ITGB4-213ENST00000584939 K7EN84 100 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 IGHV3-30P01768 117 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 IGHV3-33P01772 117 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 IGHV3-30-3P0DP02 117 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 IGHV3-30-5P0DP03 117 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 GNG4P50150 75 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 SFRP2Q96HF1 295 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 ABCA13Q86UQ4 5058 aa11.52□□□□□ -0.57
ITGB4-213ENST00000584939 PSCAO43653 123 aa11.51□□□□□ -0.57
ITGB4-213ENST00000584939 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
ITGB4-213ENST00000584939 C14orf178Q8N769 122 aaPredicted RBP11.51□□□□□ -0.57
ITGB4-213ENST00000584939 OR10AG1Q8NH19 301 aa11.51□□□□□ -0.57
ITGB4-213ENST00000584939 PHLDA3Q9Y5J5 127 aa11.51□□□□□ -0.57
ITGB4-213ENST00000584939 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 M0R381 172 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 RHODO00212 210 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 OR5AL1P0C617 328 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 GZMBP10144 247 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 TOR2AQ5JU69 321 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 OCC1Q8TAD7 63 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 FAM210AQ96ND0 272 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 Q9HAA7 133 aa11.5□□□□□ -0.57
ITGB4-213ENST00000584939 IGLC6P0CF74 106 aa11.49□□□□□ -0.57
ITGB4-213ENST00000584939 FAM74A4Q5TZK3 123 aa11.49□□□□□ -0.57
ITGB4-213ENST00000584939 A0A087WWL8 130 aa11.48□□□□□ -0.57
ITGB4-213ENST00000584939 MUC21A0A0G2JKD1 596 aa11.48□□□□□ -0.57
ITGB4-213ENST00000584939 MUC21A0A140T8X8 626 aa11.48□□□□□ -0.57
ITGB4-213ENST00000584939 NDUFS6O75380 124 aaKnown RBP11.48□□□□□ -0.57
ITGB4-213ENST00000584939 ZFP82Q8N141 532 aa11.48□□□□□ -0.57
ITGB4-213ENST00000584939 LRCOL1A6NCL2 159 aa11.47□□□□□ -0.57
ITGB4-213ENST00000584939 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
ITGB4-213ENST00000584939 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
ITGB4-213ENST00000584939 Q8N3U1 123 aa11.47□□□□□ -0.57
ITGB4-213ENST00000584939 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
ITGB4-213ENST00000584939 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
ITGB4-213ENST00000584939 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
ITGB4-213ENST00000584939 A0A087WWC5 75 aa11.46□□□□□ -0.57
ITGB4-213ENST00000584939 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.57
ITGB4-213ENST00000584939 DNAH5Q8TE73 4624 aa11.45□□□□□ -0.58
ITGB4-213ENST00000584939 APOBP04114 4563 aaKnown RBP11.45□□□□□ -0.58
ITGB4-213ENST00000584939 C9JQL5 133 aa11.45□□□□□ -0.58
ITGB4-213ENST00000584939 GCSHP23434 173 aa11.45□□□□□ -0.58
ITGB4-213ENST00000584939 LAGE3Q14657 143 aa11.45□□□□□ -0.58
ITGB4-213ENST00000584939 RNASE7Q9H1E1 156 aaKnown RBP11.45□□□□□ -0.58
ITGB4-213ENST00000584939 P01737 135 aa11.44□□□□□ -0.58
ITGB4-213ENST00000584939 XGP55808 180 aa11.44□□□□□ -0.58
ITGB4-213ENST00000584939 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
ITGB4-213ENST00000584939 DAZAP1Q96EP5 407 aaKnown RBP11.44□□□□□ -0.58
ITGB4-213ENST00000584939 TM2D2Q9BX73 214 aa11.44□□□□□ -0.58
ITGB4-213ENST00000584939 EIF5A2Q9GZV4 153 aaKnown RBP11.44□□□□□ -0.58
ITGB4-213ENST00000584939 RPS20P60866 119 aaKnown RBP11.43□□□□□ -0.58
ITGB4-213ENST00000584939 DAZ4Q86SG3 579 aaKnown RBP11.43□□□□□ -0.58
ITGB4-213ENST00000584939 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
ITGB4-213ENST00000584939 BIN3Q9NQY0 253 aa11.43□□□□□ -0.58
ITGB4-213ENST00000584939 DAZ3Q9NR90 486 aaKnown RBP11.43□□□□□ -0.58
ITGB4-213ENST00000584939 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
ITGB4-213ENST00000584939 TRAV8-3A0A0A6YYJ7 113 aa11.42□□□□□ -0.58
ITGB4-213ENST00000584939 TRBV10-1A0A0K0K1A3 114 aa11.42□□□□□ -0.58
ITGB4-213ENST00000584939 Q8N814 137 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms