RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 MUC21A0A0G2JKD1 596 aa14.12□□□□□ -0.15
TOP3A-218ENST00000584669 MUC21A0A140T8X8 626 aa14.12□□□□□ -0.15
TOP3A-218ENST00000584669 CRYGDP07320 174 aa14.12□□□□□ -0.15
TOP3A-218ENST00000584669 TAGLN2P37802 199 aaKnown RBP14.12□□□□□ -0.15
TOP3A-218ENST00000584669 RHODO00212 210 aa14.11□□□□□ -0.15
TOP3A-218ENST00000584669 LINC00315P59091 139 aa14.11□□□□□ -0.15
TOP3A-218ENST00000584669 SPATA12Q7Z6I5 190 aa14.11□□□□□ -0.15
TOP3A-218ENST00000584669 LYPD6BQ8NI32 183 aa14.11□□□□□ -0.15
TOP3A-218ENST00000584669 C19orf71A6NCJ1 209 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 GAGE12JA6NER3 117 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 SNAI2O43623 268 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 GZMBP10144 247 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 TIRAPP58753 221 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 GAGE1Q13065 139 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 GAGE4Q13068 117 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 GAGE5Q13069 117 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 GAGE13Q4V321 117 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 SMIM12Q96EX1 92 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 SSBP4Q9BWG4 385 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-218ENST00000584669 KRTAP4-5Q9BYR2 181 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 LY96Q9Y6Y9 160 aa14.1□□□□□ -0.15
TOP3A-218ENST00000584669 RBFOX3A6NFN3 312 aa14.09□□□□□ -0.15
TOP3A-218ENST00000584669 LINC00694P0DN24 101 aa14.09□□□□□ -0.15
TOP3A-218ENST00000584669 ATP6V0E2Q8NHE4 81 aa14.09□□□□□ -0.15
TOP3A-218ENST00000584669 DAZAP1Q96EP5 407 aaKnown RBP14.09□□□□□ -0.15
TOP3A-218ENST00000584669 TNFRSF18Q9Y5U5 241 aa14.09□□□□□ -0.15
TOP3A-218ENST00000584669 OR5AL1P0C617 328 aa14.08□□□□□ -0.16
TOP3A-218ENST00000584669 SSTP61278 116 aa14.08□□□□□ -0.16
TOP3A-218ENST00000584669 OR2D3Q8NGH3 330 aa14.08□□□□□ -0.16
TOP3A-218ENST00000584669 DNAH10OSP0CZ25 163 aa14.07□□□□□ -0.16
TOP3A-218ENST00000584669 GTSF1LQ9H1H1 148 aa14.07□□□□□ -0.16
TOP3A-218ENST00000584669 RYR1P21817 5038 aa14.06□□□□□ -0.16
TOP3A-218ENST00000584669 CDK2AP2O75956 126 aa14.06□□□□□ -0.16
TOP3A-218ENST00000584669 SPANXN1Q5VSR9 72 aa14.06□□□□□ -0.16
TOP3A-218ENST00000584669 Q6ZRN7 208 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-218ENST00000584669 P01737 135 aa14.05□□□□□ -0.16
TOP3A-218ENST00000584669 BTF3P20290 206 aaKnown RBP14.05□□□□□ -0.16
TOP3A-218ENST00000584669 EVI2AP22794 236 aa14.05□□□□□ -0.16
TOP3A-218ENST00000584669 OR10J3Q5JRS4 329 aa14.05□□□□□ -0.16
TOP3A-218ENST00000584669 TOR2AQ5JU69 321 aa14.05□□□□□ -0.16
TOP3A-218ENST00000584669 LELP1Q5T871 98 aa14.05□□□□□ -0.16
TOP3A-218ENST00000584669 MAPKAPK5-AS1Q8N8E1 139 aa14.05□□□□□ -0.16
TOP3A-218ENST00000584669 TRAV9-2A0A087WT02 112 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 TRAV8-6A0A0B4J262 113 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 IGHV3-38A0A0C4DH36 116 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 K7EN84 100 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 IGLC6P0CF74 106 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 RPS20P60866 119 aaKnown RBP14.04□□□□□ -0.16
TOP3A-218ENST00000584669 FER1L6-AS1Q8NA97 138 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 OCC1Q8TAD7 63 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 TPPP3Q9BW30 176 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 BIN3Q9NQY0 253 aa14.04□□□□□ -0.16
TOP3A-218ENST00000584669 TMEM250H0YL14 139 aa14.03□□□□□ -0.16
TOP3A-218ENST00000584669 KRTAP10-2P60368 255 aa14.03□□□□□ -0.16
TOP3A-218ENST00000584669 ZNF56Q15929 161 aa14.03□□□□□ -0.16
TOP3A-218ENST00000584669 NUDT10Q8NFP7 164 aa14.03□□□□□ -0.16
TOP3A-218ENST00000584669 NUDT11Q96G61 164 aa14.03□□□□□ -0.16
TOP3A-218ENST00000584669 MSRB1Q9NZV6 116 aa14.02□□□□□ -0.17
TOP3A-218ENST00000584669 CEBPGP53567 150 aa14.01□□□□□ -0.17
TOP3A-218ENST00000584669 RAB4BP61018 213 aa14.01□□□□□ -0.17
TOP3A-218ENST00000584669 LINC01556Q5JQF7 62 aa14.01□□□□□ -0.17
TOP3A-218ENST00000584669 EIF5A2Q9GZV4 153 aaKnown RBP14.01□□□□□ -0.17
TOP3A-218ENST00000584669 RNASE7Q9H1E1 156 aaKnown RBP14.01□□□□□ -0.17
TOP3A-218ENST00000584669 K7EP13 123 aa14□□□□□ -0.17
TOP3A-218ENST00000584669 IGHV3-30P01768 117 aa14□□□□□ -0.17
TOP3A-218ENST00000584669 IGHV3-33P01772 117 aa14□□□□□ -0.17
TOP3A-218ENST00000584669 IGHV3-30-3P0DP02 117 aa14□□□□□ -0.17
TOP3A-218ENST00000584669 IGHV3-30-5P0DP03 117 aa14□□□□□ -0.17
TOP3A-218ENST00000584669 FAM210AQ96ND0 272 aa14□□□□□ -0.17
TOP3A-218ENST00000584669 KIF25-AS1Q9Y6Z4 181 aa14□□□□□ -0.17
TOP3A-218ENST00000584669 TRBV10-1A0A0K0K1A3 114 aa13.99□□□□□ -0.17
TOP3A-218ENST00000584669 XKRY2A2RUG3 117 aa13.99□□□□□ -0.17
TOP3A-218ENST00000584669 Q8N3U1 123 aa13.99□□□□□ -0.17
TOP3A-218ENST00000584669 AP1S3Q96PC3 154 aa13.99□□□□□ -0.17
TOP3A-218ENST00000584669 ABCA13Q86UQ4 5058 aa13.99□□□□□ -0.17
TOP3A-218ENST00000584669 F5H697 171 aa13.98□□□□□ -0.17
TOP3A-218ENST00000584669 RPL36AP83881 106 aaKnown RBP13.98□□□□□ -0.17
TOP3A-218ENST00000584669 LYZL1Q6UWQ5 148 aa13.98□□□□□ -0.17
TOP3A-218ENST00000584669 C10orf126Q8N4M7 172 aa13.98□□□□□ -0.17
TOP3A-218ENST00000584669 RPL36ALQ969Q0 106 aaKnown RBP13.98□□□□□ -0.17
TOP3A-218ENST00000584669 RPP21Q9H633 154 aaKnown RBP13.98□□□□□ -0.17
TOP3A-218ENST00000584669 TRBV7-3A0A075B6L6 115 aa13.97□□□□□ -0.17
TOP3A-218ENST00000584669 UBE2D3P61077 147 aa13.97□□□□□ -0.17
TOP3A-218ENST00000584669 UBE2D2P62837 147 aa13.97□□□□□ -0.17
TOP3A-218ENST00000584669 CACNG7P62955 275 aa13.97□□□□□ -0.17
TOP3A-218ENST00000584669 TEX261Q6UWH6 196 aa13.97□□□□□ -0.17
TOP3A-218ENST00000584669 NFE4Q86UQ8 179 aa13.97□□□□□ -0.17
TOP3A-218ENST00000584669 NEXN-AS1Q8NBZ9 246 aa13.97□□□□□ -0.17
TOP3A-218ENST00000584669 F2Z2F3 143 aa13.96□□□□□ -0.17
TOP3A-218ENST00000584669 SRP19P09132 144 aaKnown RBP13.96□□□□□ -0.17
TOP3A-218ENST00000584669 SMIM17P0DL12 118 aa13.96□□□□□ -0.17
TOP3A-218ENST00000584669 OR10G8Q8NGN5 311 aa13.96□□□□□ -0.17
TOP3A-218ENST00000584669 HSPG2P98160 4391 aa13.96□□□□□ -0.17
TOP3A-218ENST00000584669 A0A087WWC5 75 aa13.95□□□□□ -0.18
TOP3A-218ENST00000584669 MGPP08493 103 aa13.95□□□□□ -0.18
TOP3A-218ENST00000584669 CTRLP40313 264 aa13.95□□□□□ -0.18
TOP3A-218ENST00000584669 SMIM7Q9BQ49 75 aa13.95□□□□□ -0.18
TOP3A-218ENST00000584669 IBA57-AS1B1ANH7 110 aa13.94□□□□□ -0.18
TOP3A-218ENST00000584669 EREGO14944 169 aa13.94□□□□□ -0.18
TOP3A-218ENST00000584669 NDUFS6O75380 124 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms