RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 ZNF48Q96MX3 618 aaPredicted RBP9.08□□□□□ -0.96
ERBB2-218ENST00000584450 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 IGHV4OR15-8A0A075B7B6 117 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 A0A087WW49 117 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 RBAKDNA6NC62 111 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 F8VRH5 84 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 IGLC6P0CF74 106 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 DEFB125Q8N687 156 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 RNASE8Q8TDE3 154 aaKnown RBP9.08□□□□□ -0.96
ERBB2-218ENST00000584450 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 TRBV25-1A0A075B6N4 114 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 TRAV8-2A0A0B4J237 113 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 UBE2L6O14933 153 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 CIDEAO60543 219 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 PF4P02776 101 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 HECTD1Q9ULT8 2610 aa9.08□□□□□ -0.96
ERBB2-218ENST00000584450 MRPS12O15235 138 aaKnown RBP9.07□□□□□ -0.96
ERBB2-218ENST00000584450 CRXO43186 299 aaPredicted RBP9.07□□□□□ -0.96
ERBB2-218ENST00000584450 PRR9Q5T870 116 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 C9orf47Q6ZRZ4 202 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 TAX1BP3O14907 124 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 PRM2P04554 102 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 FXYD2P54710 66 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 PAPPA-AS1Q5QFB9 102 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 LYRM7Q5U5X0 104 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 PRORYQ9H606 182 aa9.07□□□□□ -0.96
ERBB2-218ENST00000584450 SAMD13Q5VXD3 122 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 TRBV6-1A0A0K0K1D8 114 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 TMEM262E9PQX1 116 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 GATA3P23771 443 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 Q8N1Y9 231 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 VPREB3Q9UKI3 123 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 CLPSL1A2RUU4 121 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 A6NDX4 124 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 ODF1Q14990 250 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 C19orf54Q5BKX5 351 aa9.06□□□□□ -0.96
ERBB2-218ENST00000584450 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
ERBB2-218ENST00000584450 RELNP78509 3460 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 A0A087WX48 190 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 IGKV2D-26A0A0A0MRZ7 120 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 GAGE1Q13065 139 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 OCIAD2Q56VL3 154 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 GATD1Q8NB37 220 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 H3BMG7 143 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 HLA-DRB4P13762 266 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 ETDBQ3ZM63 59 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 HLA-DRB4X5D2U9 266 aa9.05□□□□□ -0.96
ERBB2-218ENST00000584450 LINC01549A6NIU2 74 aa9.04□□□□□ -0.96
ERBB2-218ENST00000584450 HTN3P15516 51 aa9.04□□□□□ -0.96
ERBB2-218ENST00000584450 SUMO4Q6EEV6 95 aa9.04□□□□□ -0.96
ERBB2-218ENST00000584450 FLNCQ14315 2725 aa9.04□□□□□ -0.96
ERBB2-218ENST00000584450 H3BRM9 83 aa9.04□□□□□ -0.96
ERBB2-218ENST00000584450 PAX2Q02962 417 aa9.04□□□□□ -0.96
ERBB2-218ENST00000584450 MRPL53Q96EL3 112 aaKnown RBP9.03□□□□□ -0.96
ERBB2-218ENST00000584450 LINC01619G3V211 115 aa9.03□□□□□ -0.96
ERBB2-218ENST00000584450 PMVKQ15126 192 aa9.03□□□□□ -0.96
ERBB2-218ENST00000584450 GAGE13Q4V321 117 aa9.03□□□□□ -0.96
ERBB2-218ENST00000584450 ZFAND2AQ8N6M9 145 aa9.03□□□□□ -0.96
ERBB2-218ENST00000584450 MYMXA0A1B0GTQ4 84 aa9.03□□□□□ -0.96
ERBB2-218ENST00000584450 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
ERBB2-218ENST00000584450 CFAP46Q8IYW2 2715 aa9.02□□□□□ -0.96
ERBB2-218ENST00000584450 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 TRGV4A0A0C4DH28 118 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 ZNF415Q09FC8 603 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 ADAMTSL5Q6ZMM2 481 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 LGALS1P09382 135 aaKnown RBP9.02□□□□□ -0.97
ERBB2-218ENST00000584450 P0DMU3 169 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 FAM231AP0DMU4 169 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 FAM231CP0DMU5 169 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 DEFB130BP0DP73 79 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 DEFB130AP0DP74 79 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 BOD1L2Q8IYS8 172 aa9.02□□□□□ -0.97
ERBB2-218ENST00000584450 A0A1W2PPM0 123 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 TRPT1Q86TN4 253 aaKnown RBP9.01□□□□□ -0.97
ERBB2-218ENST00000584450 TMEM61Q8N0U2 210 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 GTSF1LQ9H1H1 148 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 ASH1LQ9NR48 2969 aaKnown RBP9.01□□□□□ -0.97
ERBB2-218ENST00000584450 GAGE12JA6NER3 117 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 ELANEP08246 267 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 GAGE4Q13068 117 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 GAGE5Q13069 117 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 ZNRF2Q8NHG8 242 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 H3BUA1 57 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 IGHG4P01861 327 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 CEMP1Q6PRD7 247 aaPredicted RBP9.01□□□□□ -0.97
ERBB2-218ENST00000584450 CEND1Q8N111 149 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 RASL10AQ92737 203 aa9.01□□□□□ -0.97
ERBB2-218ENST00000584450 C11orf68Q9H3H3 251 aaKnown RBP9.01□□□□□ -0.97
ERBB2-218ENST00000584450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9□□□□□ -0.97
ERBB2-218ENST00000584450 IGKV2-29A2NJV5 120 aaPredicted RBP9□□□□□ -0.97
ERBB2-218ENST00000584450 COX6CP09669 75 aa9□□□□□ -0.97
ERBB2-218ENST00000584450 A0A0J9YXV3 536 aa9□□□□□ -0.97
ERBB2-218ENST00000584450 CIRBPQ14011 172 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms