RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 USP9YO00507 2555 aaPredicted RBP9.96□□□□□ -0.81
CSNK1D-222ENST00000584377 SPRY2O43597 315 aa9.96□□□□□ -0.81
CSNK1D-222ENST00000584377 SRD5A1P18405 259 aa9.96□□□□□ -0.81
CSNK1D-222ENST00000584377 MORN3Q6PF18 240 aaPredicted RBP9.96□□□□□ -0.81
CSNK1D-222ENST00000584377 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.81
CSNK1D-222ENST00000584377 TMEM160Q9NX00 188 aa9.96□□□□□ -0.82
CSNK1D-222ENST00000584377 ATP5LO75964 103 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 IGHV4-59P01825 116 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 ZFAND6Q6FIF0 208 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 PTH2Q96A98 100 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 FAM110AQ9BQ89 295 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 EDN2P20800 178 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 DEFB112Q30KQ8 113 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 DLX4Q92988 240 aaPredicted RBP9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 CARD19Q96LW7 228 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 CSMD2Q7Z408 3487 aa9.95□□□□□ -0.82
CSNK1D-222ENST00000584377 TRBV7-3A0A075B6L6 115 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 SLC25A16P16260 332 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 APRG1Q8IVJ8 170 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 MYOZ3Q8TDC0 251 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 K7EMT4 169 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 PSMB8P28062 276 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 TEX29Q8N6K0 151 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 C14orf178Q8N769 122 aaPredicted RBP9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 DPH3P1Q9H4G8 78 aa9.94□□□□□ -0.82
CSNK1D-222ENST00000584377 HOXA3O43365 443 aaPredicted RBP9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 GNRH2O43555 120 aa9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 NHLRC4P0CG21 123 aaPredicted RBP9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 LINC01356Q8N9X3 169 aa9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 PPDPFLQ8WWR9 84 aa9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 ZNF580Q9UK33 172 aa9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 FAM208BQ5VWN6 2430 aa9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 MED14OSP0DP75 135 aa9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 ID1P41134 155 aa9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
CSNK1D-222ENST00000584377 ZFYVE26Q68DK2 2539 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 POLQO75417 2590 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 C10orf99Q6UWK7 81 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 PSMB2P49721 201 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 SUMO2P61956 95 aaKnown RBP9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 TEN1Q86WV5 123 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 DCANP1Q8TF63 244 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 RASL10AQ92737 203 aa9.92□□□□□ -0.82
CSNK1D-222ENST00000584377 ANKRD17O75179 2603 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 MGPP08493 103 aa9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 RPL32P62910 135 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 CENPEQ02224 2701 aa9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 TGFAP01135 160 aa9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 SFTA2Q6UW10 78 aa9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 MAPK1IP1LQ8NDC0 245 aa9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 RPL39LQ96EH5 51 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 VCX2Q9H322 139 aa9.91□□□□□ -0.82
CSNK1D-222ENST00000584377 LRRK2Q5S007 2527 aa9.9□□□□□ -0.82
CSNK1D-222ENST00000584377 LOC107984156A0A0G2JMH3 177 aa9.9□□□□□ -0.82
CSNK1D-222ENST00000584377 KLLNB2CW77 178 aa9.9□□□□□ -0.82
CSNK1D-222ENST00000584377 ZFP2Q6ZN57 461 aa9.9□□□□□ -0.82
CSNK1D-222ENST00000584377 ARL17AQ8IVW1 177 aa9.9□□□□□ -0.82
CSNK1D-222ENST00000584377 ZANQ9Y493 2812 aa9.9□□□□□ -0.82
CSNK1D-222ENST00000584377 ORMDL2Q53FV1 153 aa9.9□□□□□ -0.82
CSNK1D-222ENST00000584377 A0A096LNT2 108 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 ZNF688P0C7X2 276 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 FAM159AQ6UWV7 190 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 CITED1Q99966 193 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 ZNF462Q96JM2 2506 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 A0A087WX48 190 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 J3QLI3 93 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 LINC01549A6NIU2 74 aa9.89□□□□□ -0.83
CSNK1D-222ENST00000584377 DOPEY2Q9Y3R5 2298 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 LINC01619G3V211 115 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 KIR2DL4Q99706 377 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 GAGE12JA6NER3 117 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 GAGE7O76087 117 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 GAGE12FP0CL80 117 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 GAGE12GP0CL81 117 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 GAGE12IP0CL82 117 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 GAGE4Q13068 117 aa9.88□□□□□ -0.83
CSNK1D-222ENST00000584377 FBN2P35556 2912 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 CUBNO60494 3623 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 MYMXA0A1B0GTQ4 84 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 RHODO00212 210 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 NXPH4O95158 308 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 PRB1P04280 392 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 TRAV12-3A0A0B4J271 114 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 PPP1R17O96001 155 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 COX6B1P14854 86 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 PLNP26678 52 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 TOMM6Q96B49 74 aa9.87□□□□□ -0.83
CSNK1D-222ENST00000584377 TRBV20-1A0A075B6N2 111 aa9.86□□□□□ -0.83
CSNK1D-222ENST00000584377 RNF223E7ERA6 249 aa9.86□□□□□ -0.83
CSNK1D-222ENST00000584377 CD7P09564 240 aa9.86□□□□□ -0.83
CSNK1D-222ENST00000584377 NDUFV3P56181 108 aaKnown RBP9.86□□□□□ -0.83
CSNK1D-222ENST00000584377 VPREB3Q9UKI3 123 aa9.86□□□□□ -0.83
CSNK1D-222ENST00000584377 PTPN13Q12923 2485 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms