RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
SKA2-209ENST00000583976 TPPP3Q9BW30 176 aa10.76□□□□□ -0.69
SKA2-209ENST00000583976 MRPS16Q9Y3D3 137 aaKnown RBP10.76□□□□□ -0.69
SKA2-209ENST00000583976 IGHV3-73A0A0B4J1V6 119 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 LINC00315P59091 139 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 RPS20P60866 119 aaKnown RBP10.75□□□□□ -0.69
SKA2-209ENST00000583976 FHL2Q14192 279 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 FAM74A3Q4VXF1 159 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 SYT8Q8NBV8 401 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 VSIG2Q96IQ7 327 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 JPT2Q9H910 190 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 LY96Q9Y6Y9 160 aa10.75□□□□□ -0.69
SKA2-209ENST00000583976 XKRY2A2RUG3 117 aa10.74□□□□□ -0.69
SKA2-209ENST00000583976 RS1O15537 224 aa10.74□□□□□ -0.69
SKA2-209ENST00000583976 CXCL1P09341 107 aa10.74□□□□□ -0.69
SKA2-209ENST00000583976 ERVFC1-1P60608 527 aa10.74□□□□□ -0.69
SKA2-209ENST00000583976 CFAP126Q5VTH2 177 aa10.74□□□□□ -0.69
SKA2-209ENST00000583976 PTH2Q96A98 100 aa10.74□□□□□ -0.69
SKA2-209ENST00000583976 RPP21Q9H633 154 aaKnown RBP10.74□□□□□ -0.69
SKA2-209ENST00000583976 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
SKA2-209ENST00000583976 A0A096LPF7 62 aa10.73□□□□□ -0.69
SKA2-209ENST00000583976 GATCO43716 136 aaKnown RBP10.73□□□□□ -0.69
SKA2-209ENST00000583976 RPL23P62829 140 aaKnown RBP10.73□□□□□ -0.69
SKA2-209ENST00000583976 ADIRFQ15847 76 aa10.73□□□□□ -0.69
SKA2-209ENST00000583976 Q6ZRN7 208 aaPredicted RBP10.73□□□□□ -0.69
SKA2-209ENST00000583976 FER1L6-AS1Q8NA97 138 aa10.73□□□□□ -0.69
SKA2-209ENST00000583976 OR10AG1Q8NH19 301 aa10.73□□□□□ -0.69
SKA2-209ENST00000583976 NAT8Q9UHE5 227 aa10.73□□□□□ -0.69
SKA2-209ENST00000583976 PAX4O43316 350 aa10.72□□□□□ -0.69
SKA2-209ENST00000583976 SNAI2O43623 268 aa10.72□□□□□ -0.69
SKA2-209ENST00000583976 SPANXN1Q5VSR9 72 aa10.72□□□□□ -0.69
SKA2-209ENST00000583976 ZFP82Q8N141 532 aa10.72□□□□□ -0.69
SKA2-209ENST00000583976 SSBP4Q9BWG4 385 aaPredicted RBP10.72□□□□□ -0.69
SKA2-209ENST00000583976 SAMD10Q9BYL1 202 aa10.72□□□□□ -0.69
SKA2-209ENST00000583976 PRO0255Q9UI72 69 aa10.72□□□□□ -0.69
SKA2-209ENST00000583976 MYCBP2O75592 4640 aa10.72□□□□□ -0.69
SKA2-209ENST00000583976 A8MWV9 139 aa10.71□□□□□ -0.69
SKA2-209ENST00000583976 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
SKA2-209ENST00000583976 IGLC6P0CF74 106 aa10.71□□□□□ -0.69
SKA2-209ENST00000583976 BTF3P20290 206 aaKnown RBP10.71□□□□□ -0.69
SKA2-209ENST00000583976 CRYBA4P53673 196 aa10.71□□□□□ -0.69
SKA2-209ENST00000583976 PIK3CD-AS1Q5SR53 167 aa10.71□□□□□ -0.69
SKA2-209ENST00000583976 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
SKA2-209ENST00000583976 A0A087WWL8 130 aa10.7□□□□□ -0.7
SKA2-209ENST00000583976 A0A1W2PPQ1 181 aa10.7□□□□□ -0.7
SKA2-209ENST00000583976 H3BNG1 76 aa10.7□□□□□ -0.7
SKA2-209ENST00000583976 SLAQ13239 276 aa10.7□□□□□ -0.7
SKA2-209ENST00000583976 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
SKA2-209ENST00000583976 LYZL1Q6UWQ5 148 aa10.7□□□□□ -0.7
SKA2-209ENST00000583976 ISOC2Q96AB3 205 aa10.7□□□□□ -0.7
SKA2-209ENST00000583976 COMMD7Q86VX2 200 aa10.69□□□□□ -0.7
SKA2-209ENST00000583976 SFRP2Q96HF1 295 aa10.69□□□□□ -0.7
SKA2-209ENST00000583976 OSTCQ9NRP0 149 aa10.69□□□□□ -0.7
SKA2-209ENST00000583976 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
SKA2-209ENST00000583976 C15orf54Q8N8G6 183 aa10.68□□□□□ -0.7
SKA2-209ENST00000583976 MSRB1Q9NZV6 116 aa10.68□□□□□ -0.7
SKA2-209ENST00000583976 TNFRSF18Q9Y5U5 241 aa10.68□□□□□ -0.7
SKA2-209ENST00000583976 LOC100131303A0A0U1RQF7 123 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 A8MWL6 223 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 F2Z2F3 143 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 CIDEAO60543 219 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 NXPH4O95158 308 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 CRYGDP07320 174 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 DNAH10OSP0CZ25 163 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 ZFP2Q6ZN57 461 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 Q6ZSN1 163 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 SLC25A29Q8N8R3 303 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 OR10G8Q8NGN5 311 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 GTSF1Q8WW33 167 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 ICOSQ9Y6W8 199 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 VPS13BQ7Z7G8 4022 aa10.67□□□□□ -0.7
SKA2-209ENST00000583976 SIVA1O15304 175 aa10.66□□□□□ -0.7
SKA2-209ENST00000583976 GYPEP15421 78 aa10.66□□□□□ -0.7
SKA2-209ENST00000583976 CACNG7P62955 275 aa10.66□□□□□ -0.7
SKA2-209ENST00000583976 UFSP1Q6NVU6 142 aa10.66□□□□□ -0.7
SKA2-209ENST00000583976 PGLYRP4Q96LB8 373 aa10.66□□□□□ -0.7
SKA2-209ENST00000583976 V9GYV3 84 aa10.66□□□□□ -0.7
SKA2-209ENST00000583976 LINC00862A6NCI5 91 aa10.65□□□□□ -0.7
SKA2-209ENST00000583976 RHODO00212 210 aa10.65□□□□□ -0.7
SKA2-209ENST00000583976 NTF3P20783 257 aa10.65□□□□□ -0.7
SKA2-209ENST00000583976 CT83Q5H943 113 aa10.65□□□□□ -0.7
SKA2-209ENST00000583976 C14orf178Q8N769 122 aaPredicted RBP10.65□□□□□ -0.7
SKA2-209ENST00000583976 TSKUQ8WUA8 353 aa10.65□□□□□ -0.7
SKA2-209ENST00000583976 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.7
SKA2-209ENST00000583976 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 TMEM218A2RU14 115 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 K7EQD1 137 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 CTRLP40313 264 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 RHOHQ15669 191 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 TWIST1Q15672 202 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 ZNF56Q15929 161 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
SKA2-209ENST00000583976 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
SKA2-209ENST00000583976 DMBT1Q9UGM3 2413 aaPredicted RBP10.64□□□□□ -0.71
SKA2-209ENST00000583976 EPM2AB3EWF7 344 aa10.63□□□□□ -0.71
SKA2-209ENST00000583976 F8W036 122 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms