RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 TMEM263Q8WUH6 116 aaKnown RBP7.87□□□□□ -1.15
TOP3A-216ENST00000583804 C16orf74Q96GX8 76 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 LINC00467Q9BRT7 94 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 PRO1933Q9H354 126 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 TRGV11A0A075B6L2 103 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 IGHV3-16A0A0C4DH30 117 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 M0R381 172 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 SCGB1D1O95968 90 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 RNASE3P12724 160 aaKnown RBP7.87□□□□□ -1.15
TOP3A-216ENST00000583804 SRIP30626 198 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 CAMPP49913 170 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 TDRG1Q3Y452 100 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 TEX43Q6ZNM6 134 aa7.87□□□□□ -1.15
TOP3A-216ENST00000583804 F2Z2F3 143 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 IGLC6P0CF74 106 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 FOXA3P55318 350 aaPredicted RBP7.86□□□□□ -1.15
TOP3A-216ENST00000583804 HBBP68871 147 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 SLAQ13239 276 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 C18orf32Q8TCD1 76 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 RNASE8Q8TDE3 154 aaKnown RBP7.86□□□□□ -1.15
TOP3A-216ENST00000583804 SAMD10Q9BYL1 202 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 MSRB1Q9NZV6 116 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 TGP01266 2768 aa7.86□□□□□ -1.15
TOP3A-216ENST00000583804 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
TOP3A-216ENST00000583804 TENM3Q9P273 2699 aa7.85□□□□□ -1.15
TOP3A-216ENST00000583804 TWIST1Q15672 202 aa7.85□□□□□ -1.15
TOP3A-216ENST00000583804 SPANXN1Q5VSR9 72 aa7.85□□□□□ -1.15
TOP3A-216ENST00000583804 MRPL52Q86TS9 123 aaKnown RBP7.85□□□□□ -1.15
TOP3A-216ENST00000583804 GATD1Q8NB37 220 aa7.85□□□□□ -1.15
TOP3A-216ENST00000583804 BORCS7Q96B45 105 aa7.85□□□□□ -1.15
TOP3A-216ENST00000583804 C11orf68Q9H3H3 251 aaKnown RBP7.85□□□□□ -1.15
TOP3A-216ENST00000583804 NOP10Q9NPE3 64 aaKnown RBP7.85□□□□□ -1.15
TOP3A-216ENST00000583804 MRPL16Q9NX20 251 aaKnown RBP7.85□□□□□ -1.15
TOP3A-216ENST00000583804 PHLDA3Q9Y5J5 127 aa7.85□□□□□ -1.15
TOP3A-216ENST00000583804 SPART-AS1P0CW21 52 aa7.84□□□□□ -1.15
TOP3A-216ENST00000583804 CTRLP40313 264 aa7.84□□□□□ -1.15
TOP3A-216ENST00000583804 KIAA1644Q3SXP7 199 aa7.84□□□□□ -1.15
TOP3A-216ENST00000583804 C11orf72Q8NBR9 251 aa7.84□□□□□ -1.15
TOP3A-216ENST00000583804 C2orf88Q9BSF0 95 aa7.84□□□□□ -1.15
TOP3A-216ENST00000583804 ALKBH7Q9BT30 221 aaPredicted RBP7.84□□□□□ -1.15
TOP3A-216ENST00000583804 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
TOP3A-216ENST00000583804 A0A1B0GUT8 65 aa7.83□□□□□ -1.16
TOP3A-216ENST00000583804 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
TOP3A-216ENST00000583804 AMTP48728 403 aa7.83□□□□□ -1.16
TOP3A-216ENST00000583804 FAM222AQ5U5X8 452 aa7.83□□□□□ -1.16
TOP3A-216ENST00000583804 C9orf85Q96MD7 179 aa7.83□□□□□ -1.16
TOP3A-216ENST00000583804 JPT2Q9H910 190 aa7.83□□□□□ -1.16
TOP3A-216ENST00000583804 TRGV1A0A0A0MS02 117 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 A0A1B0GW15 77 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 SNAI2O43623 268 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 DEFB130BP0DP73 79 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 DEFB130AP0DP74 79 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 RAB4AP20338 218 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 NTF3P20783 257 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 DAZ2Q13117 558 aaKnown RBP7.82□□□□□ -1.16
TOP3A-216ENST00000583804 RIGQ13278 110 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 NIT1Q86X76 327 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 Q8N976 141 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 C11orf45Q8TAV5 145 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 EDA2RQ9HAV5 297 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 DKK2Q9UBU2 259 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 CELA1Q9UNI1 258 aa7.82□□□□□ -1.16
TOP3A-216ENST00000583804 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 IGHV3-73A0A0B4J1V6 119 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 LYRM9A8MSI8 78 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 MGPP08493 103 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 OR5AL1P0C617 328 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 NANOS2P60321 138 aaKnown RBP7.81□□□□□ -1.16
TOP3A-216ENST00000583804 SPXQ9BT56 116 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 MUC4Q99102 2169 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 A0A087WWL8 130 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 TEX48A0A1B0GUV7 120 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 GAGE12BA1L429 117 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 M0R2P5 195 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 GAGE7O76087 117 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 GAGE12FP0CL80 117 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 GAGE12GP0CL81 117 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 GAGE12IP0CL82 117 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 PMCHP20382 165 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 DAD1P61803 113 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 FAM74A4Q5TZK3 123 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 Q6ZTI0 123 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 VAMP8Q9BV40 100 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 SCRT2Q9NQ03 307 aa7.81□□□□□ -1.16
TOP3A-216ENST00000583804 HSBP1O75506 76 aa7.8□□□□□ -1.16
TOP3A-216ENST00000583804 MED14OSP0DP75 135 aa7.8□□□□□ -1.16
TOP3A-216ENST00000583804 EVI2AP22794 236 aa7.8□□□□□ -1.16
TOP3A-216ENST00000583804 CACNG7P62955 275 aa7.8□□□□□ -1.16
TOP3A-216ENST00000583804 C12orf74Q32Q52 190 aa7.8□□□□□ -1.16
TOP3A-216ENST00000583804 AMN1Q8IY45 258 aa7.8□□□□□ -1.16
TOP3A-216ENST00000583804 C14orf178Q8N769 122 aaPredicted RBP7.8□□□□□ -1.16
TOP3A-216ENST00000583804 SYT8Q8NBV8 401 aa7.8□□□□□ -1.16
TOP3A-216ENST00000583804 CHCHD1Q96BP2 118 aaKnown RBP7.8□□□□□ -1.16
TOP3A-216ENST00000583804 STAB2Q8WWQ8 2551 aa7.79□□□□□ -1.16
TOP3A-216ENST00000583804 TRGV2A0A075B6R0 118 aa7.79□□□□□ -1.16
TOP3A-216ENST00000583804 SMKR1H3BMG3 65 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms