RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 KCNIP2Q9NS61 270 aa5.15□□□□□ -1.59
SMCHD1-210ENST00000583800 OR5AC2Q9NZP5 309 aa5.15□□□□□ -1.59
SMCHD1-210ENST00000583800 TRAV8-1A0A0A6YYK1 113 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 PGPA6NDG6 321 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 C17orf112F2Z3M2 114 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 PFN1P07737 140 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 GNG5P63218 68 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 LAGE3Q14657 143 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 LINC01620Q4KN68 170 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 KHDC3LQ587J8 217 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 FFAR4Q5NUL3 377 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 CFAP126Q5VTH2 177 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 GOLT1AQ6ZVE7 132 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 CMTM2Q8TAZ6 248 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 DEFB104AQ8WTQ1 72 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 PRADC1Q9BSG0 188 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 OTORQ9NRC9 128 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
SMCHD1-210ENST00000583800 TRBV6-4A0A1B0GX49 114 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 PCP4L1A6NKN8 68 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 RS1O15537 224 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 TAS2R45P59539 299 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 ZNF876PQ49A33 203 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 SCXQ7RTU7 201 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 ATP6V0E2Q8NHE4 81 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 ASB13Q8WXK3 278 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 KCNS1Q96KK3 526 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 ATP5SQ99766 215 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 NMES1Q9C002 83 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 GTSF1LQ9H1H1 148 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 TREM1Q9NP99 234 aa5.13□□□□□ -1.59
SMCHD1-210ENST00000583800 ZNF80P51504 273 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 ZNF506Q5JVG8 444 aa5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 FAM74A1Q5RGS3 127 aa5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 DAZ4Q86SG3 579 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 TMEM75Q8N9X5 138 aa5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 BAALCQ8WXS3 180 aa5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 SMIM3Q9BZL3 60 aa5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 DAZ3Q9NR90 486 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 MBD2Q9UBB5 411 aa5.12□□□□□ -1.59
SMCHD1-210ENST00000583800 CIDEAO60543 219 aa5.11□□□□□ -1.59
SMCHD1-210ENST00000583800 MGST1P10620 155 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-210ENST00000583800 GAGE5Q13069 117 aa5.11□□□□□ -1.59
SMCHD1-210ENST00000583800 C9orf85Q96MD7 179 aa5.11□□□□□ -1.59
SMCHD1-210ENST00000583800 HSPB11Q9Y547 144 aa5.11□□□□□ -1.59
SMCHD1-210ENST00000583800 TRAV8-3A0A0A6YYJ7 113 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 HMGB3O15347 200 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 GCGP01275 180 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 S100A9P06702 114 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 LINC00694P0DN24 101 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 RNASE3P12724 160 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 RAB2AP61019 212 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 SCGB1C1Q8TD33 95 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 DNAJC30Q96LL9 226 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 NDFIP1Q9BT67 221 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 CCDC32Q9BV29 185 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 PARLQ9H300 379 aa5.1□□□□□ -1.59
SMCHD1-210ENST00000583800 A0A1W2PPV4 95 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 RBFOX3A6NFN3 312 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 GGTLC3B5MD39 225 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 H2BFSP57053 126 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 SEC61GP60059 68 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 ACOT6Q3I5F7 207 aaPredicted RBP5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 CIRBP-AS1Q8TBR5 109 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 PPP1R1CQ8WVI7 109 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 CHAC1Q9BUX1 264 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 SAMD10Q9BYL1 202 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 WFDC1Q9HC57 220 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 Q9UF83 564 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 PSG8Q9UQ74 426 aa5.09□□□□□ -1.59
SMCHD1-210ENST00000583800 IGKV2D-24A0A075B6R9 120 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 IGLV5-39A0A0G2JS06 123 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 TAAR5O14804 337 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 OXTP01178 125 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 TCRAP04437 139 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 ARL14EPLP0DKL9 152 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 RPL12P30050 165 aaKnown RBP5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 ASAH1Q13510 395 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 ZFP69Q49AA0 526 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 C14orf178Q8N769 122 aaPredicted RBP5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 CYB561D1Q8N8Q1 229 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 OR2T35Q8NGX2 323 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 ENKURQ8TC29 256 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 PTH2Q96A98 100 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 JPT2Q9H910 190 aa5.08□□□□□ -1.6
SMCHD1-210ENST00000583800 IGKV3D-20A0A0C4DH25 116 aa5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 A8MWV9 139 aa5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 MPC2O95563 127 aa5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 IGLV2-11P01706 119 aa5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 IGLV2-8P01709 118 aa5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 CDC34P49427 236 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 CYCSP99999 105 aaKnown RBP5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 FLI1Q01543 452 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 LGALSLQ3ZCW2 172 aaPredicted RBP5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 SMUG1Q53HV7 270 aa5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 UFSP1Q6NVU6 142 aa5.07□□□□□ -1.6
SMCHD1-210ENST00000583800 ZFP2Q6ZN57 461 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms