RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 A0A1W2PQD3 144 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 RBAKDNA6NC62 111 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 LINC01549A6NIU2 74 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 C5orf67F2Z3F1 127 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 H3BVH4 76 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 PANO1I0J062 215 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 K7EM74 188 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 OVOL1O14753 267 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 SLC25A20O43772 301 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 ZNF861PO60384 105 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 COX7A2P2O60397 106 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 DPM2O94777 84 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 TCL1BO95988 128 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 IGHV3-11P01762 117 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 DEFA4P12838 97 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 FCER1GP30273 86 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 UBE2D1P51668 147 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 LOXL1Q08397 574 aaPredicted RBP3.24□□□□□ -1.89
SS18-223ENST00000583595 SYCNQ0VAF6 134 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 PIGYQ3MUY2 71 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 TMEM170BQ5T4T1 132 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 VN1R4Q7Z5H5 301 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 ARL17AQ8IVW1 177 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 TMEM86BQ8N661 226 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 LINC00612Q8N6U2 182 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 TRGV9Q99603 122 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 HEATR5BQ9P2D3 2071 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 PIEZO1Q92508 2521 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 CHD7Q9P2D1 2997 aa3.24□□□□□ -1.89
SS18-223ENST00000583595 THADAQ6YHU6 1953 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 KIAA1549Q9HCM3 1950 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 NCOR1O75376 2440 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 IGHV3OR15-7A0A075B7D8 119 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 IGKV2D-26A0A0A0MRZ7 120 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 FAM236AA0A1B0GUQ0 79 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 FAM236BA0A1B0GV22 79 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 WI2-2373I1.2A0A1W2PRP0 233 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 KLLNB2CW77 178 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 H3BMM0 161 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 LGALS9O00182 355 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 ATOX1O00244 68 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 ACYP1P07311 99 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 DEFB134Q4QY38 66 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 DEFB121Q5J5C9 76 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 C1orf195Q5TG92 126 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 GOLT1AQ6ZVE7 132 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 CIRBP-AS1Q8TBR5 109 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 SPTSSAQ969W0 71 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 UBE2WQ96B02 151 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 PLEKHB2Q96CS7 222 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 ZNF799Q96GE5 643 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 COX14Q96I36 57 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 HHLA3Q9XRX5 114 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 AMMECR1Q9Y4X0 333 aaPredicted RBP3.23□□□□□ -1.89
SS18-223ENST00000583595 U3KQK5 164 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 KIAA1549LQ6ZVL6 1849 aa3.23□□□□□ -1.89
SS18-223ENST00000583595 MUC6Q6W4X9 2439 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 MUC3AQ02505 3323 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 TMSB15BA0A087X1C1 80 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 IGKV1-12A0A0C4DH73 117 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 C19orf71A6NCJ1 209 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 LINC01546A6NGU7 62 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 M0R135 149 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 BPY2O14599 106 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 IGKV1D-12P01611 117 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 P0DMU3 169 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 FAM231AP0DMU4 169 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 FAM231CP0DMU5 169 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 PSMB8P28062 276 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 IFI27P40305 119 aaPredicted RBP3.22□□□□□ -1.89
SS18-223ENST00000583595 ZNF137PP52743 207 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 ZNF56Q15929 161 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 TMEM155Q4W5P6 130 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 HES3Q5TGS1 186 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 ZFP2Q6ZN57 461 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 MIR17HGQ75NE6 70 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 FAM19A3Q7Z5A8 133 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 AGPAT4-IT1Q9H0P7 198 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 SND1-IT1Q9HBX3 110 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 KLK5Q9Y337 293 aaPredicted RBP3.22□□□□□ -1.89
SS18-223ENST00000583595 NCOA6Q14686 2063 aaPredicted RBP3.22□□□□□ -1.89
SS18-223ENST00000583595 ATG2BQ96BY7 2078 aa3.22□□□□□ -1.89
SS18-223ENST00000583595 TRAV13-1A0A0B4J241 112 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 TRAV17A0A0B4J275 112 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 TRBV10-2A0A0K0K1G8 114 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 A0A1B0GUT8 65 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 J3QQQ9 107 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 COX6A1P12074 109 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 CD24P25063 80 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 EFNA4P52798 201 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 FGF12P61328 243 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 UBE2L3P68036 154 aaKnown RBP3.21□□□□□ -1.9
SS18-223ENST00000583595 ATXN8Q156A1 80 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 FAM222AQ5U5X8 452 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 MED12LQ86YW9 2145 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 ORMDL3Q8N138 153 aa3.21□□□□□ -1.9
SS18-223ENST00000583595 SLC25A29Q8N8R3 303 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms