RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 TMEM70Q9BUB7 260 aa4.06□□□□□ -1.76
CRLF3-204ENST00000583527 SMIM2Q9BVW6 85 aa4.06□□□□□ -1.76
CRLF3-204ENST00000583527 NXT2Q9NPJ8 142 aaKnown RBP4.06□□□□□ -1.76
CRLF3-204ENST00000583527 ZNF256Q9Y2P7 627 aaPredicted RBP4.06□□□□□ -1.76
CRLF3-204ENST00000583527 ANK2Q01484 3957 aa4.06□□□□□ -1.76
CRLF3-204ENST00000583527 IGLV2-18A0A075B6J9 118 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 LINC01546A6NGU7 62 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 EREGO14944 169 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 CRXO43186 299 aaPredicted RBP4.05□□□□□ -1.76
CRLF3-204ENST00000583527 GNRH2O43555 120 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 SAP30O75446 220 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 DEFA6Q01524 100 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 ZNF415Q09FC8 603 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 NSUN5P1Q3KNT7 163 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 SPATA45Q537H7 98 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 SUMO4Q6EEV6 95 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 PET117Q6UWS5 81 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 NDUFA11Q86Y39 141 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 Q8N1Y9 231 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 C14orf178Q8N769 122 aaPredicted RBP4.05□□□□□ -1.76
CRLF3-204ENST00000583527 Q8N8P6 123 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 SYT8Q8NBV8 401 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
CRLF3-204ENST00000583527 NDUFAF3Q9BU61 184 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 ZNF747Q9BV97 191 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 MAP1LC3CQ9BXW4 147 aa4.05□□□□□ -1.76
CRLF3-204ENST00000583527 CBY3A6NI87 242 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 OR11H12B2RN74 326 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 H0Y8G0 127 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 KRTAP10-3P60369 221 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 MAJINQ3KP22 176 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 TRPT1Q86TN4 253 aaKnown RBP4.04□□□□□ -1.76
CRLF3-204ENST00000583527 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 DEFB125Q8N687 156 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 POM121L12Q8N7R1 296 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 RASL10AQ92737 203 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 CLUHP3Q96NS8 147 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 KIF25-AS1Q9Y6Z4 181 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 DNAH3Q8TD57 4116 aa4.04□□□□□ -1.76
CRLF3-204ENST00000583527 TRAV9-2A0A087WT02 112 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 A0A087WWL8 130 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 IGLV1-51P01701 117 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 PF4P02776 101 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 SMIM17P0DL12 118 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 FOSL1P15407 271 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 LINC00315P59091 139 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 SUMO2P61956 95 aaKnown RBP4.03□□□□□ -1.76
CRLF3-204ENST00000583527 ZNF56Q15929 161 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 FAM74A4Q5TZK3 123 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 ZNF705AQ6ZN79 300 aaPredicted RBP4.03□□□□□ -1.76
CRLF3-204ENST00000583527 NEGR1Q7Z3B1 354 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.03□□□□□ -1.76
CRLF3-204ENST00000583527 LINC00482Q8N8I6 264 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 TMEM158Q8WZ71 300 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 IFI27L1Q96BM0 104 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 C14orf144Q96I85 54 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 PMCHL2Q9BQD1 86 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 C20orf78Q9BR46 151 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 LINC00467Q9BRT7 94 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 WFDC10AQ9H1F0 79 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 JPT2Q9H910 190 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 MDFICQ9P1T7 246 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 TP73-AS1Q9UF72 201 aa4.03□□□□□ -1.76
CRLF3-204ENST00000583527 TRRAPQ9Y4A5 3859 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 NOTCH1P46531 2555 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 hDV102S1A0JD36 115 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 PRSS47A8MTI9 375 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 TCAPO15273 167 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 CRLF1O75462 422 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 IGLC3P0DOY3 106 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 FCER1GP30273 86 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 CTAG1AP78358 180 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 LAGE3Q14657 143 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 LGALS9BQ3B8N2 356 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 LGALS9CQ6DKI2 356 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 STHQ8IWL8 128 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 C11orf72Q8NBR9 251 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 IL17DQ8TAD2 202 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 C18orf15Q96N68 181 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 MIEN1Q9BRT3 115 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 MCRIP2Q9BUT9 160 aaKnown RBP4.02□□□□□ -1.77
CRLF3-204ENST00000583527 ST20Q9HBF5 79 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 XCL2Q9UBD3 114 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 UQCR10Q9UDW1 63 aa4.02□□□□□ -1.77
CRLF3-204ENST00000583527 HSBP1L1C9JCN9 74 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 M0R2P5 195 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 ATP5LO75964 103 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 NUDT3O95989 172 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 PPP1R17O96001 155 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 IGLL1P15814 213 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 HNRNPA3P51991 378 aaKnown RBP4.01□□□□□ -1.77
CRLF3-204ENST00000583527 RPL32P62910 135 aaKnown RBP4.01□□□□□ -1.77
CRLF3-204ENST00000583527 BEAN1Q3B7T3 259 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 ZNF876PQ49A33 203 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 ORMDL2Q53FV1 153 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 MORN3Q6PF18 240 aaPredicted RBP4.01□□□□□ -1.77
CRLF3-204ENST00000583527 MRPL52Q86TS9 123 aaKnown RBP4.01□□□□□ -1.77
CRLF3-204ENST00000583527 FAM110AQ9BQ89 295 aa4.01□□□□□ -1.77
CRLF3-204ENST00000583527 CSTL1Q9H114 145 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms