RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 HIST1H2BCP62807 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST2H2BEQ16778 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.51□□□□□ -0.73
SENP3-208ENST00000583277 ORMDL3Q8N138 153 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BHQ93079 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 MRAP2Q96G30 205 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BNQ99877 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 HIST1H2BMQ99879 126 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 KIF25-AS1Q9Y6Z4 181 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 NACAE9PAV3 2078 aa10.51□□□□□ -0.73
SENP3-208ENST00000583277 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
SENP3-208ENST00000583277 MGPP08493 103 aa10.5□□□□□ -0.73
SENP3-208ENST00000583277 CKS2P33552 79 aa10.5□□□□□ -0.73
SENP3-208ENST00000583277 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
SENP3-208ENST00000583277 POM121L12Q8N7R1 296 aa10.5□□□□□ -0.73
SENP3-208ENST00000583277 Q8NAQ8 132 aa10.5□□□□□ -0.73
SENP3-208ENST00000583277 JPT2Q9H910 190 aa10.5□□□□□ -0.73
SENP3-208ENST00000583277 A0A087WWL8 130 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 LYRM9A8MSI8 78 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 D6R8Y8 96 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 EMP1P54849 157 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 DEFB121Q5J5C9 76 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 Q6ZTI0 123 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 ALKBH7Q9BT30 221 aaPredicted RBP10.49□□□□□ -0.73
SENP3-208ENST00000583277 LAMTOR2Q9Y2Q5 125 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 U3KQK5 164 aa10.49□□□□□ -0.73
SENP3-208ENST00000583277 RS1O15537 224 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 CRYGDP07320 174 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 LINC00315P59091 139 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 CFAP126Q5VTH2 177 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 SPATA25Q9BR10 227 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 ZNF56Q15929 161 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 OR10J3Q5JRS4 329 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 PRELID3AQ96N28 172 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 SAMD10Q9BYL1 202 aa10.48□□□□□ -0.73
SENP3-208ENST00000583277 TRGV2A0A075B6R0 118 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 TEX48A0A1B0GUV7 120 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 F5H697 171 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 CIDEAO60543 219 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 PPP1R17O96001 155 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 S100A6P06703 90 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 UFSP1Q6NVU6 142 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 SBSPONQ8IVN8 264 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 LINC00612Q8N6U2 182 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 C18orf15Q96N68 181 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 RETNQ9HD89 108 aa10.47□□□□□ -0.73
SENP3-208ENST00000583277 GAGE12BA1L429 117 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 GAGE7O76087 117 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 NCR2O95944 276 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 GAGE12FP0CL80 117 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 GAGE12GP0CL81 117 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 GAGE12IP0CL82 117 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 Q0VG73 95 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 MRAPQ8TCY5 172 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 TM2D3Q9BRN9 247 aa10.46□□□□□ -0.74
SENP3-208ENST00000583277 TRAV26-2A0A0B4J265 109 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 SMKR1H3BMG3 65 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 H7C1H1 209 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 FAM222AQ5U5X8 452 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 SUMO4Q6EEV6 95 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 C18orf32Q8TCD1 76 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 C11orf68Q9H3H3 251 aaKnown RBP10.45□□□□□ -0.74
SENP3-208ENST00000583277 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 DKK2Q9UBU2 259 aa10.45□□□□□ -0.74
SENP3-208ENST00000583277 TENM3Q9P273 2699 aa10.44□□□□□ -0.74
SENP3-208ENST00000583277 DEFB4AO15263 64 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 TNFRSF6BO95407 300 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 NPYP01303 97 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 NDUFA6P56556 154 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 COA6Q5JTJ3 125 aaKnown RBP10.43□□□□□ -0.74
SENP3-208ENST00000583277 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 NRACQ8N912 160 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 MAP1LC3AQ9H492 121 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 ZMAT4Q9H898 229 aa10.43□□□□□ -0.74
SENP3-208ENST00000583277 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
SENP3-208ENST00000583277 M0QY20 66 aa10.42□□□□□ -0.74
SENP3-208ENST00000583277 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
SENP3-208ENST00000583277 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
SENP3-208ENST00000583277 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
SENP3-208ENST00000583277 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
SENP3-208ENST00000583277 DAD1P61803 113 aa10.41□□□□□ -0.74
SENP3-208ENST00000583277 IQCJQ1A5X6 159 aa10.41□□□□□ -0.74
SENP3-208ENST00000583277 B9D2Q9BPU9 175 aa10.41□□□□□ -0.74
SENP3-208ENST00000583277 C20orf78Q9BR46 151 aa10.41□□□□□ -0.74
SENP3-208ENST00000583277 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
SENP3-208ENST00000583277 TRBV6-5A0A0K0K1A5 114 aa10.39□□□□□ -0.75
SENP3-208ENST00000583277 PRSS47A8MTI9 375 aa10.39□□□□□ -0.75
SENP3-208ENST00000583277 PMCHP20382 165 aa10.39□□□□□ -0.75
SENP3-208ENST00000583277 SUMO2P61956 95 aaKnown RBP10.39□□□□□ -0.75
SENP3-208ENST00000583277 RPL39LQ96EH5 51 aaKnown RBP10.39□□□□□ -0.75
SENP3-208ENST00000583277 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
SENP3-208ENST00000583277 NXT2Q9NPJ8 142 aaKnown RBP10.39□□□□□ -0.75
SENP3-208ENST00000583277 NIT2Q9NQR4 276 aa10.39□□□□□ -0.75
SENP3-208ENST00000583277 MEGF8Q7Z7M0 2845 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms