RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 CHCHD5Q9BSY4 110 aa4.42□□□□□ -1.7
RTTN-209ENST00000583043 TRAV8-4A0A0B4J246 113 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 UNQ9165/PRO28630Q6UXU0 137 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 NFE4Q86UQ8 179 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 C10orf126Q8N4M7 172 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 TRAV4A0A0B4J268 109 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 TINCRA0A1B0GVN0 87 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 MAJINQ3KP22 176 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 ICE1Q9Y2F5 2266 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 TRAV26-1A0A087WT03 109 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 CXCL5P42830 114 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 TIRAPP58753 221 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 PCP2Q8IVA1 136 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 MUC7Q8TAX7 377 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 K7EQD1 137 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 CCL24O00175 119 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 POLR2KP53803 58 aaKnown RBP4.41□□□□□ -1.7
RTTN-209ENST00000583043 Q8N1Y9 231 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 TTC28Q96AY4 2481 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 GOLGB1Q14789 3259 aaKnown RBP4.41□□□□□ -1.7
RTTN-209ENST00000583043 PKDREJQ9NTG1 2253 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 PRIMA1Q86XR5 153 aa4.41□□□□□ -1.7
RTTN-209ENST00000583043 TMEM263Q8WUH6 116 aaKnown RBP4.41□□□□□ -1.7
RTTN-209ENST00000583043 H3BT86 120 aa4.4□□□□□ -1.7
RTTN-209ENST00000583043 SOCS3O14543 225 aa4.4□□□□□ -1.7
RTTN-209ENST00000583043 FXYD7P58549 80 aa4.4□□□□□ -1.7
RTTN-209ENST00000583043 CFHR3Q02985 330 aa4.4□□□□□ -1.7
RTTN-209ENST00000583043 GVINP1Q7Z2Y8 2422 aa4.4□□□□□ -1.7
RTTN-209ENST00000583043 PCSK5Q92824 1860 aa4.4□□□□□ -1.7
RTTN-209ENST00000583043 MRPS36P82909 103 aaKnown RBP4.4□□□□□ -1.7
RTTN-209ENST00000583043 RNF183Q96D59 192 aa4.4□□□□□ -1.7
RTTN-209ENST00000583043 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 H0YGX0 51 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 H3BMM0 161 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 IGHV4-31P0DP07 118 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 C9orf66Q5T8R8 295 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 CARD19Q96LW7 228 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 H7C2G1 150 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 IGHV3-53P01767 116 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 C2orf82Q6UX34 121 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 POM121L12Q8N7R1 296 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 SLC25A29Q8N8R3 303 aa4.4□□□□□ -1.71
RTTN-209ENST00000583043 MRPL23Q16540 153 aaKnown RBP4.39□□□□□ -1.71
RTTN-209ENST00000583043 TRBV7-3A0A075B6L6 115 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 C19orf84I3L1E1 186 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 RS1O15537 224 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
RTTN-209ENST00000583043 SLC25A20O43772 301 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 RPL39LQ96EH5 51 aaKnown RBP4.39□□□□□ -1.71
RTTN-209ENST00000583043 KNCNA6PVL3 124 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 F6UB75 175 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 ZNRF2Q8NHG8 242 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 DCANP1Q8TF63 244 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 M0QY20 66 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 ZFAND6Q6FIF0 208 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 ZGRF1Q86YA3 2104 aa4.39□□□□□ -1.71
RTTN-209ENST00000583043 MALP21145 153 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 MRAPQ8TCY5 172 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 MAP6D1Q9H9H5 199 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 TEN1Q86WV5 123 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 ROS1P08922 2347 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 P0DMU3 169 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 FAM231AP0DMU4 169 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 FAM231CP0DMU5 169 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 CKS1BP61024 79 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 NDUFA11Q86Y39 141 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 UBE2WQ96B02 151 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 C20orf173Q96LM9 149 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 ZNF702PQ9H963 129 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 NDUFA7O95182 113 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 RNASE3P12724 160 aaKnown RBP4.38□□□□□ -1.71
RTTN-209ENST00000583043 DEFB114Q30KQ6 69 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 Q8N2B8 174 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 VSIG2Q96IQ7 327 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 PKIGQ9Y2B9 76 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 TRAV12-2A0A075B6T6 113 aa4.38□□□□□ -1.71
RTTN-209ENST00000583043 LINC01548A6NM66 108 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 PRB1P04280 392 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 C2orf91Q6ZV80 131 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 FXYD2P54710 66 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 LINC00158P58513 81 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 FAM19A4Q96LR4 140 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 TRBV6-4A0A1B0GX49 114 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 M0QXV9 152 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 IGLV2-18A0A075B6J9 118 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 TRBV12-3P01733 135 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 RNASE1P07998 156 aaKnown RBP4.37□□□□□ -1.71
RTTN-209ENST00000583043 A0A1W2PRX2 142 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 TMEM223A0PJW6 202 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 GAGE12HA6NDE8 117 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 FGF6P10767 208 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 FAM222AQ5U5X8 452 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 TMEM61Q8N0U2 210 aa4.37□□□□□ -1.71
RTTN-209ENST00000583043 OR13C6PQ8NH95 151 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms