RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 NRACQ8N912 160 aa10.25□□□□□ -0.77
SRSF1-205ENST00000582730 ZNF580Q9UK33 172 aa10.25□□□□□ -0.77
SRSF1-205ENST00000582730 PRRC2AP48634 2157 aaKnown RBP10.25□□□□□ -0.77
SRSF1-205ENST00000582730 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
SRSF1-205ENST00000582730 HOXD3P31249 432 aaPredicted RBP10.25□□□□□ -0.77
SRSF1-205ENST00000582730 SNRPD3P62318 126 aaKnown RBP10.25□□□□□ -0.77
SRSF1-205ENST00000582730 IGHV4-4A0A075B6R2 117 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
SRSF1-205ENST00000582730 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 SPAG8Q99932 426 aaPredicted RBP10.24□□□□□ -0.77
SRSF1-205ENST00000582730 J3QR89 54 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 CD7P09564 240 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 HIST2H2BCQ6DN03 193 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 HIST2H2BDQ6DRA6 164 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 AMTNQ6UX39 209 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 MTURNQ8N3F0 131 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 FAM19A4Q96LR4 140 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 DPM2O94777 84 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 C18orf65Q6ZTR6 163 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 TMEM160Q9NX00 188 aa10.24□□□□□ -0.77
SRSF1-205ENST00000582730 A0A1B0GV72 72 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 LINC01546A6NGU7 62 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 ELANEP08246 267 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 LAGE3Q14657 143 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
SRSF1-205ENST00000582730 DUX3Q96PT4 197 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 TMEM89A2RUT3 159 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 FSHBP01225 129 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
SRSF1-205ENST00000582730 MRAP2Q96G30 205 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 SPATA25Q9BR10 227 aa10.23□□□□□ -0.77
SRSF1-205ENST00000582730 C12orf74Q32Q52 190 aa10.22□□□□□ -0.77
SRSF1-205ENST00000582730 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
SRSF1-205ENST00000582730 SLURP1P55000 103 aa10.22□□□□□ -0.77
SRSF1-205ENST00000582730 DEFB104AQ8WTQ1 72 aa10.22□□□□□ -0.77
SRSF1-205ENST00000582730 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
SRSF1-205ENST00000582730 MYOZ3Q8TDC0 251 aa10.22□□□□□ -0.77
SRSF1-205ENST00000582730 UBE2E2Q96LR5 201 aa10.22□□□□□ -0.77
SRSF1-205ENST00000582730 MRPL35Q9NZE8 188 aaKnown RBP10.22□□□□□ -0.77
SRSF1-205ENST00000582730 KLLNB2CW77 178 aa10.21□□□□□ -0.77
SRSF1-205ENST00000582730 INSL3P51460 131 aa10.21□□□□□ -0.77
SRSF1-205ENST00000582730 SMIM2Q9BVW6 85 aa10.21□□□□□ -0.77
SRSF1-205ENST00000582730 ATP5LO75964 103 aa10.21□□□□□ -0.78
SRSF1-205ENST00000582730 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.78
SRSF1-205ENST00000582730 APCP25054 2843 aa10.21□□□□□ -0.78
SRSF1-205ENST00000582730 SUMO2P61956 95 aaKnown RBP10.2□□□□□ -0.78
SRSF1-205ENST00000582730 APRG1Q8IVJ8 170 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 JPT2Q9H910 190 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 A0A087WWL8 130 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 F5H697 171 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 K7EQG2 157 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 RASL10AQ92737 203 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 FAM74A4Q5TZK3 123 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 LRRC75A-AS1Q8N1F1 130 aa10.2□□□□□ -0.78
SRSF1-205ENST00000582730 A0A0J9YX75 114 aa10.19□□□□□ -0.78
SRSF1-205ENST00000582730 WFDC11Q8NEX6 87 aa10.19□□□□□ -0.78
SRSF1-205ENST00000582730 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
SRSF1-205ENST00000582730 PRO0461Q9UI25 63 aa10.19□□□□□ -0.78
SRSF1-205ENST00000582730 HLA-DRB4P13762 266 aa10.19□□□□□ -0.78
SRSF1-205ENST00000582730 HTN1P15515 57 aa10.19□□□□□ -0.78
SRSF1-205ENST00000582730 HLA-DRB4X5D2U9 266 aa10.19□□□□□ -0.78
SRSF1-205ENST00000582730 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 MED14OSP0DP75 135 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 CKS1BP61024 79 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 TAL2Q16559 108 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 MUC4Q99102 2169 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 ITPR3Q14573 2671 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 C11orf44Q8N8P7 122 aa10.18□□□□□ -0.78
SRSF1-205ENST00000582730 LGALS9O00182 355 aa10.17□□□□□ -0.78
SRSF1-205ENST00000582730 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
SRSF1-205ENST00000582730 MDFICQ9P1T7 246 aa10.17□□□□□ -0.78
SRSF1-205ENST00000582730 A0A1B0GWB2 263 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 KRTAP1-3Q8IUG1 177 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 KLHL30-AS1Q8NEE0 82 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 DEFB131AP59861 70 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 ORMDL2Q53FV1 153 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 Q8N1Y9 231 aa10.16□□□□□ -0.78
SRSF1-205ENST00000582730 FLNAP21333 2647 aaKnown RBP10.15□□□□□ -0.78
SRSF1-205ENST00000582730 A0A087WX48 190 aa10.15□□□□□ -0.78
SRSF1-205ENST00000582730 LINC01619G3V211 115 aa10.15□□□□□ -0.79
SRSF1-205ENST00000582730 DUSP14O95147 198 aaKnown RBP10.15□□□□□ -0.79
SRSF1-205ENST00000582730 SVIPQ8NHG7 77 aa10.15□□□□□ -0.79
SRSF1-205ENST00000582730 DYNLRB2Q8TF09 96 aa10.14□□□□□ -0.79
SRSF1-205ENST00000582730 IGHV1OR15-1A0A075B7D0 117 aa10.14□□□□□ -0.79
SRSF1-205ENST00000582730 A0A1W2PRX2 142 aa10.14□□□□□ -0.79
SRSF1-205ENST00000582730 APOMO95445 188 aa10.14□□□□□ -0.79
SRSF1-205ENST00000582730 ZNF56Q15929 161 aa10.14□□□□□ -0.79
SRSF1-205ENST00000582730 SETD2Q9BYW2 2564 aaPredicted RBP10.14□□□□□ -0.79
SRSF1-205ENST00000582730 TRAV26-1A0A087WT03 109 aa10.13□□□□□ -0.79
SRSF1-205ENST00000582730 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
SRSF1-205ENST00000582730 WNK1Q9H4A3 2382 aa10.13□□□□□ -0.79
SRSF1-205ENST00000582730 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms