RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KIF25-AS1Q9Y6Z4 181 aa6.74□□□□□ -1.33
RFFL-210ENST00000582308 TRAV9-1A0A075B6T8 112 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 A0A087WWL8 130 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 SCO1O75880 301 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 EVI2AP22794 236 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 S100PP25815 95 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 LINC00315P59091 139 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 ELOBQ15370 118 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 KCNIP4Q6PIL6 250 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 CBLN2Q8IUK8 224 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 OR4C5Q8NGB2 326 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 BTF3L4Q96K17 158 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 AP1S3Q96PC3 154 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 SMCO4Q9NRQ5 59 aa6.73□□□□□ -1.33
RFFL-210ENST00000582308 TGIF2-C20orf24A0A0A6YYL0 155 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 IGHV3-73A0A0B4J1V6 119 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 A0A1B0GW15 77 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 ATP5G1P05496 136 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 TRGC1P0CF51 173 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 HTN3P15516 51 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 HOXA5P20719 270 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 CAMPP49913 170 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 HBBP68871 147 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 FHL2Q14192 279 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 Q6ZSN1 163 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 ATP5L2Q7Z4Y8 100 aa6.72□□□□□ -1.33
RFFL-210ENST00000582308 DYNC2H1Q8NCM8 4307 aaKnown RBP6.72□□□□□ -1.33
RFFL-210ENST00000582308 FAM74A4Q5TZK3 123 aa6.71□□□□□ -1.34
RFFL-210ENST00000582308 ZFP2Q6ZN57 461 aa6.71□□□□□ -1.34
RFFL-210ENST00000582308 GATD1Q8NB37 220 aa6.71□□□□□ -1.34
RFFL-210ENST00000582308 TMEM191AQ9H0A3 160 aa6.71□□□□□ -1.34
RFFL-210ENST00000582308 TRBV24-1A0A075B6N3 115 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 TRGV4A0A0C4DH28 118 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 F5H768 121 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 RHODO00212 210 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 SMIM17P0DL12 118 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 GATA1P15976 413 aaPredicted RBP6.7□□□□□ -1.34
RFFL-210ENST00000582308 SMIM15Q7Z3B0 74 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 RNF185Q96GF1 192 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 DPH3P1Q9H4G8 78 aa6.7□□□□□ -1.34
RFFL-210ENST00000582308 DEFB131BA0A096LNP1 70 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 TRAV10A0A0B4J240 114 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 CIDEAO60543 219 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 S100A8P05109 93 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 MGPP08493 103 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 RAB4BP61018 213 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 RASL11AQ6T310 242 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 TMEM136Q6ZRR5 245 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 AMN1Q8IY45 258 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 SLC25A29Q8N8R3 303 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 PHLDA1Q8WV24 401 aaPredicted RBP6.69□□□□□ -1.34
RFFL-210ENST00000582308 Q9UF83 564 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
RFFL-210ENST00000582308 TENM2Q9NT68 2774 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 COLCA2A8K830 154 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 F5H697 171 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 P0DMU3 169 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 FAM231AP0DMU4 169 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 FAM231CP0DMU5 169 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 RAB4AP20338 218 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 CRYBA4P53673 196 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 ZNF56Q15929 161 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 SUMO4Q6EEV6 95 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 FAM210BQ96KR6 192 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
RFFL-210ENST00000582308 TRAV26-1A0A087WT03 109 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 TRAV26-2A0A0B4J265 109 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 A0A0J9YY99 117 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 TRBV6-4A0A1B0GX49 114 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 M0QY20 66 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 GAS8-AS1O95177 125 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 SLAQ13239 276 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 MRPL51Q4U2R6 128 aaKnown RBP6.67□□□□□ -1.34
RFFL-210ENST00000582308 VSIG2Q96IQ7 327 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
RFFL-210ENST00000582308 LOC100131303A0A0U1RQF7 123 aa6.66□□□□□ -1.34
RFFL-210ENST00000582308 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
RFFL-210ENST00000582308 K7EQD1 137 aa6.66□□□□□ -1.34
RFFL-210ENST00000582308 PAX4O43316 350 aa6.66□□□□□ -1.34
RFFL-210ENST00000582308 COX19Q49B96 90 aa6.66□□□□□ -1.34
RFFL-210ENST00000582308 CEMP1Q6PRD7 247 aaPredicted RBP6.66□□□□□ -1.34
RFFL-210ENST00000582308 NCR2O95944 276 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 HLA-DQA1P01909 254 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 GYPEP15421 78 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 RHOHQ15669 191 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 ZFAND6Q6FIF0 208 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 MUC7Q8TAX7 377 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 FRZBQ92765 325 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 MRAP2Q96G30 205 aa6.65□□□□□ -1.34
RFFL-210ENST00000582308 TRBV10-1A0A0K0K1A3 114 aa6.64□□□□□ -1.35
RFFL-210ENST00000582308 IGLL5B9A064 214 aa6.64□□□□□ -1.35
RFFL-210ENST00000582308 D6R8Y8 96 aa6.64□□□□□ -1.35
RFFL-210ENST00000582308 H3BNG1 76 aa6.64□□□□□ -1.35
RFFL-210ENST00000582308 H7C1H1 209 aa6.64□□□□□ -1.35
RFFL-210ENST00000582308 APCSP02743 223 aa6.64□□□□□ -1.35
RFFL-210ENST00000582308 MT-ND6P03923 174 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms