RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 A0A087WWL8 130 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 P0DMU3 169 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 FAM231AP0DMU4 169 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 FAM231CP0DMU5 169 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 NTF3P20783 257 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 LGALS9CQ6DKI2 356 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 SEC11CQ9BY50 192 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 ICOSQ9Y6W8 199 aa13.98□□□□□ -0.17
TOP3A-213ENST00000582230 HIGD1CA8MV81 97 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 PPP1R2P9O14990 202 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 TRGC1P0CF51 173 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 SMIM17P0DL12 118 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 RHOHQ15669 191 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 SLC25A29Q8N8R3 303 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 BORCS7Q96B45 105 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 PGLYRP4Q96LB8 373 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 PRADC1Q9BSG0 188 aa13.97□□□□□ -0.17
TOP3A-213ENST00000582230 LCE6AA0A183 80 aa13.96□□□□□ -0.17
TOP3A-213ENST00000582230 ADCYAP1P18509 176 aa13.96□□□□□ -0.17
TOP3A-213ENST00000582230 MRPL23Q16540 153 aaKnown RBP13.96□□□□□ -0.17
TOP3A-213ENST00000582230 C14orf178Q8N769 122 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-213ENST00000582230 LINC00476Q8WZB0 136 aa13.96□□□□□ -0.17
TOP3A-213ENST00000582230 MSRB1Q9NZV6 116 aa13.96□□□□□ -0.17
TOP3A-213ENST00000582230 A0A096LPF7 62 aa13.95□□□□□ -0.18
TOP3A-213ENST00000582230 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
TOP3A-213ENST00000582230 GYPEP15421 78 aa13.95□□□□□ -0.18
TOP3A-213ENST00000582230 TWIST1Q15672 202 aa13.95□□□□□ -0.18
TOP3A-213ENST00000582230 Q6ZSN1 163 aa13.95□□□□□ -0.18
TOP3A-213ENST00000582230 NAT8BQ9UHF3 227 aa13.95□□□□□ -0.18
TOP3A-213ENST00000582230 STARD9Q9P2P6 4700 aa13.95□□□□□ -0.18
TOP3A-213ENST00000582230 K7EQD1 137 aa13.94□□□□□ -0.18
TOP3A-213ENST00000582230 LY6G6CO95867 125 aa13.94□□□□□ -0.18
TOP3A-213ENST00000582230 RAB4BP61018 213 aa13.94□□□□□ -0.18
TOP3A-213ENST00000582230 ANAPC16Q96DE5 110 aa13.94□□□□□ -0.18
TOP3A-213ENST00000582230 A0A1B0GUT8 65 aa13.93□□□□□ -0.18
TOP3A-213ENST00000582230 SMIM27A0A1W2PRY6 76 aa13.93□□□□□ -0.18
TOP3A-213ENST00000582230 RNF212Q495C1 297 aa13.93□□□□□ -0.18
TOP3A-213ENST00000582230 SH2D6Q7Z4S9 175 aa13.93□□□□□ -0.18
TOP3A-213ENST00000582230 KIF25-AS1Q9Y6Z4 181 aa13.93□□□□□ -0.18
TOP3A-213ENST00000582230 TENM2Q9NT68 2774 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 EVI2AP22794 236 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 SRIP30626 198 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 CCL18P55774 89 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 ZNF56Q15929 161 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 C10orf91Q5T1B1 145 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 SMIM15Q7Z3B0 74 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 NUP35Q8NFH5 326 aa13.92□□□□□ -0.18
TOP3A-213ENST00000582230 F5H697 171 aa13.91□□□□□ -0.18
TOP3A-213ENST00000582230 NEGR1Q7Z3B1 354 aa13.91□□□□□ -0.18
TOP3A-213ENST00000582230 DPH3P1Q9H4G8 78 aa13.91□□□□□ -0.18
TOP3A-213ENST00000582230 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.18
TOP3A-213ENST00000582230 LOC100131303A0A0U1RQF7 123 aa13.9□□□□□ -0.18
TOP3A-213ENST00000582230 FAM3BP58499 235 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-213ENST00000582230 LINC00315P59091 139 aa13.9□□□□□ -0.18
TOP3A-213ENST00000582230 UBE2DNLQ8IWF7 75 aa13.9□□□□□ -0.18
TOP3A-213ENST00000582230 CARHSP1Q9Y2V2 147 aaKnown RBP13.9□□□□□ -0.18
TOP3A-213ENST00000582230 RIGQ13278 110 aa13.89□□□□□ -0.19
TOP3A-213ENST00000582230 NACAE9PAV3 2078 aa13.89□□□□□ -0.19
TOP3A-213ENST00000582230 MGPP08493 103 aa13.88□□□□□ -0.19
TOP3A-213ENST00000582230 ESRGQ1W209 222 aa13.88□□□□□ -0.19
TOP3A-213ENST00000582230 CTDSP1Q9GZU7 261 aa13.87□□□□□ -0.19
TOP3A-213ENST00000582230 A0A1B0GW15 77 aa13.86□□□□□ -0.19
TOP3A-213ENST00000582230 H7C1H1 209 aa13.86□□□□□ -0.19
TOP3A-213ENST00000582230 LINC00588Q9Y4M8 146 aa13.86□□□□□ -0.19
TOP3A-213ENST00000582230 DYNC2H1Q8NCM8 4307 aaKnown RBP13.86□□□□□ -0.19
TOP3A-213ENST00000582230 GAGE12JA6NER3 117 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 RPL36AP83881 106 aaKnown RBP13.85□□□□□ -0.19
TOP3A-213ENST00000582230 GAGE1Q13065 139 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 GAGE4Q13068 117 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 GAGE5Q13069 117 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 NDUFA5Q16718 116 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 GAGE13Q4V321 117 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 LYPD5Q6UWN5 251 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 RPL36ALQ969Q0 106 aaKnown RBP13.85□□□□□ -0.19
TOP3A-213ENST00000582230 TMEM191AQ9H0A3 160 aa13.85□□□□□ -0.19
TOP3A-213ENST00000582230 LINC00694P0DN24 101 aa13.84□□□□□ -0.19
TOP3A-213ENST00000582230 TIRAPP58753 221 aa13.84□□□□□ -0.19
TOP3A-213ENST00000582230 ATP6V0E2Q8NHE4 81 aa13.84□□□□□ -0.19
TOP3A-213ENST00000582230 Q9UF83 564 aa13.84□□□□□ -0.19
TOP3A-213ENST00000582230 MRPS16Q9Y3D3 137 aaKnown RBP13.84□□□□□ -0.19
TOP3A-213ENST00000582230 TRBV7-3A0A075B6L6 115 aa13.83□□□□□ -0.2
TOP3A-213ENST00000582230 M0QY20 66 aa13.83□□□□□ -0.2
TOP3A-213ENST00000582230 SUMO4Q6EEV6 95 aa13.83□□□□□ -0.2
TOP3A-213ENST00000582230 IMMP2LQ96T52 175 aa13.83□□□□□ -0.2
TOP3A-213ENST00000582230 S100A8P05109 93 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 RHEBQ15382 184 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 NEXN-AS1Q8NBZ9 246 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 CLRN3Q8NCR9 226 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 ZNRF2Q8NHG8 242 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 FRZBQ92765 325 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 UPK3BQ9BT76 320 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 TMEM242Q9NWH2 141 aa13.82□□□□□ -0.2
TOP3A-213ENST00000582230 RASL11AQ6T310 242 aa13.81□□□□□ -0.2
TOP3A-213ENST00000582230 ATP5L2Q7Z4Y8 100 aa13.81□□□□□ -0.2
TOP3A-213ENST00000582230 DNAJC30Q96LL9 226 aa13.81□□□□□ -0.2
TOP3A-213ENST00000582230 GTSF1LQ9H1H1 148 aa13.81□□□□□ -0.2
TOP3A-213ENST00000582230 A0A087WWC5 75 aa13.8□□□□□ -0.2
TOP3A-213ENST00000582230 C7orf77A4D0Y5 90 aa13.8□□□□□ -0.2
TOP3A-213ENST00000582230 APOC3P02656 99 aa13.8□□□□□ -0.2
TOP3A-213ENST00000582230 HBBP68871 147 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms