RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	AKR1C8P	Q5T2L2	129 aa		7.66	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114		Q6ZSA8	131 aa		7.66	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	OR11H4	Q8NGC9	324 aa		7.66	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	KLK12	Q9UKR0	248 aa		7.66	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114		A0A087WWC5	75 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	RBFOX3	A6NFN3	312 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	RHOD	O00212	210 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	C1QB	P02746	253 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	PLA2G1B	P04054	148 aa	Known RBP	7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	GIP	P09681	153 aa	Predicted RBP	7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	PIK3CD-AS1	Q5SR53	167 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	NIT1	Q86X76	327 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	UBE2W	Q96B02	151 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	PHLDA3	Q9Y5J5	127 aa		7.65	□□□□□ -1.18
CDK5RAP3-223	ENST00000582114	PTTG1	O95997	202 aa		7.64	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	TPT1	P13693	172 aa	Known RBP	7.64	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	UBE2G1	P62253	170 aa		7.64	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	FAM162B	Q5T6X4	162 aa		7.64	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	SCX	Q7RTU7	201 aa		7.64	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	HIST1H2BA	Q96A08	127 aa		7.64	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114		A0A087WX48	190 aa		7.63	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	MAP1LC3B2	A6NCE7	125 aa		7.63	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	CST9LP1	Q5W188	147 aa		7.63	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	RMI2	Q96E14	147 aa		7.63	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	SFRP2	Q96HF1	295 aa		7.63	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	FMC1	Q96HJ9	113 aa		7.63	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	MAP1LC3B	Q9GZQ8	125 aa		7.63	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	ZNF674	Q2M3X9	581 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	LINC01559	Q495D7	138 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	DNLZ	Q5SXM8	178 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	KCNIP4	Q6PIL6	250 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	ZFP82	Q8N141	532 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114		Q8N976	141 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	NKX6-2	Q9C056	277 aa	Predicted RBP	7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	ZFP30	Q9Y2G7	519 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	COX11	Q9Y6N1	276 aa		7.62	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	MUC21	A0A0G2JKD1	596 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	MUC21	A0A140T8X8	626 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114		A0A1B0GV50	99 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	TMEM262	E9PQX1	116 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	LTA	P01374	205 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	AKR1C3	P42330	323 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	FHIT	P49789	147 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	SST	P61278	116 aa		7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	RPL36A	P83881	106 aa	Known RBP	7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	RPL19	P84098	196 aa	Known RBP	7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	RPL36AL	Q969Q0	106 aa	Known RBP	7.61	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114		G3V3Q6	166 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	SMLR1	H3BR10	107 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	ARPC5	O15511	151 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	PAGE4	O60829	102 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	SEC11B	P0C7V7	166 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	UBE2D3	P61077	147 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	UBE2D2	P62837	147 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	ZNF56	Q15929	161 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	COX8C	Q7Z4L0	72 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	C15orf54	Q8N8G6	183 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	STOML3	Q8TAV4	291 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	DEFB104A	Q8WTQ1	72 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	CYTL1	Q9NRR1	136 aa		7.6	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	TRBV7-3	A0A075B6L6	115 aa		7.59	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	TRBV10-1	A0A0K0K1A3	114 aa		7.59	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	KRTAP29-1	A8MX34	341 aa	Predicted RBP	7.59	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	ELOB	Q15370	118 aa		7.59	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	OR10AG1	Q8NH19	301 aa		7.59	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	CIRBP-AS1	Q8TBR5	109 aa		7.59	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	CHAC1	Q9BUX1	264 aa		7.59	□□□□□ -1.19
CDK5RAP3-223	ENST00000582114	SCO2	A0A1W2PP80	73 aa		7.58	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	ANG	P03950	147 aa	Known RBP	7.58	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	MPV17L2	Q567V2	206 aa		7.58	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	ENHO	Q6UWT2	76 aa		7.58	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	NEXN-AS1	Q8NBZ9	246 aa		7.58	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	CHCHD7	Q9BUK0	85 aa		7.58	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	C1orf43	Q9BWL3	253 aa		7.58	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	TRBV6-8	A0A0A6YYG3	113 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	TRBV6-1	A0A0K0K1D8	114 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	IGLV2-8	P01709	118 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	HLA-DQA1	P01909	254 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	CRP	P02741	224 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	RAB4B	P61018	213 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114		Q0VG73	95 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	PRR27	Q6MZM9	219 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	ATRAID	Q6UW56	229 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	CLPSL2	Q6UWE3	100 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	FAM213B	Q8TBF2	198 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	CHCHD5	Q9BSY4	110 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	BATF3	Q9NR55	127 aa		7.57	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114		F5H697	171 aa		7.56	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	KRTAP10-4	P60372	401 aa	Predicted RBP	7.56	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	OR10G8	Q8NGN5	311 aa		7.56	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	SFT2D1	Q8WV19	159 aa		7.56	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	TCEAL7	Q9BRU2	100 aa		7.56	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	ZNF471	Q9BX82	626 aa	Predicted RBP	7.56	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	LRP1	Q07954	4544 aa	Known RBP	7.55	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	USP17L23	D6RBM5	183 aa		7.55	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	C14orf177	Q52M58	125 aa		7.55	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	SPANXN1	Q5VSR9	72 aa		7.55	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	BAGE2	Q86Y30	109 aa		7.55	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	PFDN1	O60925	122 aa		7.54	□□□□□ -1.2
CDK5RAP3-223	ENST00000582114	GAGE6	Q13070	117 aa		7.54	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 121 ms