RNA–Protein interactions for RNA: ENST00000581460.1

RAB11FIP4-207, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-207ENST00000581460 TRAV8-3A0A0A6YYJ7 113 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 TRBV6-1A0A0K0K1D8 114 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 PAGE4O60829 102 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 LTAP01374 205 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 ZNF674Q2M3X9 581 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 LINC01559Q495D7 138 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 Q5VSD8 79 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 ZFP82Q8N141 532 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 Q8N3U1 123 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 URGCP-MRPS24S4R325 110 aa12.97□□□□□ -0.33
RAB11FIP4-207ENST00000581460 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.33
RAB11FIP4-207ENST00000581460 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.33
RAB11FIP4-207ENST00000581460 SFT2D1Q8WV19 159 aa12.96□□□□□ -0.33
RAB11FIP4-207ENST00000581460 Q9UF83 564 aa12.96□□□□□ -0.33
RAB11FIP4-207ENST00000581460 A0A1B0GV50 99 aa12.95□□□□□ -0.34
RAB11FIP4-207ENST00000581460 PFDN1O60925 122 aa12.95□□□□□ -0.34
RAB11FIP4-207ENST00000581460 ZNF345Q14585 488 aa12.95□□□□□ -0.34
RAB11FIP4-207ENST00000581460 DAZ4Q86SG3 579 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP4-207ENST00000581460 KCNRGQ8N5I3 272 aa12.95□□□□□ -0.34
RAB11FIP4-207ENST00000581460 SFRP2Q96HF1 295 aa12.95□□□□□ -0.34
RAB11FIP4-207ENST00000581460 DAZ3Q9NR90 486 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP4-207ENST00000581460 UMAD1C9J7I0 102 aa12.94□□□□□ -0.34
RAB11FIP4-207ENST00000581460 SMR3BP02814 79 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP4-207ENST00000581460 SEC11BP0C7V7 166 aa12.94□□□□□ -0.34
RAB11FIP4-207ENST00000581460 HAMPP81172 84 aa12.94□□□□□ -0.34
RAB11FIP4-207ENST00000581460 TMEM70Q9BUB7 260 aa12.94□□□□□ -0.34
RAB11FIP4-207ENST00000581460 ZNF471Q9BX82 626 aaPredicted RBP12.94□□□□□ -0.34
RAB11FIP4-207ENST00000581460 KANTRA0A1W2PQU2 76 aa12.93□□□□□ -0.34
RAB11FIP4-207ENST00000581460 S100A9P06702 114 aaKnown RBP12.93□□□□□ -0.34
RAB11FIP4-207ENST00000581460 KCNIP4Q6PIL6 250 aa12.93□□□□□ -0.34
RAB11FIP4-207ENST00000581460 RPL36AP83881 106 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP4-207ENST00000581460 MBD3L1Q8WWY6 194 aa12.92□□□□□ -0.34
RAB11FIP4-207ENST00000581460 RPL36ALQ969Q0 106 aaKnown RBP12.92□□□□□ -0.34
RAB11FIP4-207ENST00000581460 RMI2Q96E14 147 aa12.92□□□□□ -0.34
RAB11FIP4-207ENST00000581460 A0A0D9SG52 128 aa12.91□□□□□ -0.34
RAB11FIP4-207ENST00000581460 SCO2A0A1W2PP80 73 aa12.91□□□□□ -0.34
RAB11FIP4-207ENST00000581460 FAM229AH3BQW9 127 aa12.91□□□□□ -0.34
RAB11FIP4-207ENST00000581460 LECT2O14960 151 aa12.91□□□□□ -0.34
RAB11FIP4-207ENST00000581460 COX11Q9Y6N1 276 aa12.91□□□□□ -0.34
RAB11FIP4-207ENST00000581460 FAT1Q14517 4588 aa12.9□□□□□ -0.34
RAB11FIP4-207ENST00000581460 TRBV10-1A0A0K0K1A3 114 aa12.9□□□□□ -0.34
RAB11FIP4-207ENST00000581460 BCL2L11O43521 198 aa12.9□□□□□ -0.34
RAB11FIP4-207ENST00000581460 EIF5AP63241 154 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP4-207ENST00000581460 NIT1Q86X76 327 aa12.9□□□□□ -0.34
RAB11FIP4-207ENST00000581460 BAGE2Q86Y30 109 aa12.9□□□□□ -0.34
RAB11FIP4-207ENST00000581460 A0A087WX48 190 aa12.89□□□□□ -0.35
RAB11FIP4-207ENST00000581460 HMSDA8MTL9 139 aa12.89□□□□□ -0.35
RAB11FIP4-207ENST00000581460 H2AFB1P0C5Y9 115 aa12.89□□□□□ -0.35
RAB11FIP4-207ENST00000581460 RPL19P84098 196 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-207ENST00000581460 WFDC2Q14508 124 aa12.89□□□□□ -0.35
RAB11FIP4-207ENST00000581460 ZNF56Q15929 161 aa12.89□□□□□ -0.35
RAB11FIP4-207ENST00000581460 IGKV2D-24A0A075B6R9 120 aa12.88□□□□□ -0.35
RAB11FIP4-207ENST00000581460 ELOBQ15370 118 aa12.88□□□□□ -0.35
RAB11FIP4-207ENST00000581460 PRR27Q6MZM9 219 aa12.88□□□□□ -0.35
RAB11FIP4-207ENST00000581460 KLK12Q9UKR0 248 aa12.88□□□□□ -0.35
RAB11FIP4-207ENST00000581460 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP4-207ENST00000581460 TRBV7-3A0A075B6L6 115 aa12.87□□□□□ -0.35
RAB11FIP4-207ENST00000581460 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
RAB11FIP4-207ENST00000581460 BAALCQ8WXS3 180 aa12.87□□□□□ -0.35
RAB11FIP4-207ENST00000581460 CXCL1P09341 107 aa12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 RAB4BP61018 213 aa12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 UBE2D3P61077 147 aa12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 UBE2D2P62837 147 aa12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 SPANXN1Q5VSR9 72 aa12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 UBE2WQ96B02 151 aa12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 CHCHD7Q9BUK0 85 aa12.86□□□□□ -0.35
RAB11FIP4-207ENST00000581460 VPS13BQ7Z7G8 4022 aa12.85□□□□□ -0.35
RAB11FIP4-207ENST00000581460 TMEM262E9PQX1 116 aa12.85□□□□□ -0.35
RAB11FIP4-207ENST00000581460 C1QBP02746 253 aa12.85□□□□□ -0.35
RAB11FIP4-207ENST00000581460 FAM30AQ9NZY2 134 aa12.85□□□□□ -0.35
RAB11FIP4-207ENST00000581460 DMBT1Q9UGM3 2413 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP4-207ENST00000581460 MUC21A0A0G2JKD1 596 aa12.84□□□□□ -0.35
RAB11FIP4-207ENST00000581460 MUC21A0A140T8X8 626 aa12.84□□□□□ -0.35
RAB11FIP4-207ENST00000581460 TMUB2Q71RG4 321 aa12.84□□□□□ -0.35
RAB11FIP4-207ENST00000581460 MLST8Q9BVC4 326 aa12.84□□□□□ -0.35
RAB11FIP4-207ENST00000581460 FLG2Q5D862 2391 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP4-207ENST00000581460 F5H697 171 aa12.83□□□□□ -0.36
RAB11FIP4-207ENST00000581460 SSTP61278 116 aa12.83□□□□□ -0.36
RAB11FIP4-207ENST00000581460 Q8N976 141 aa12.83□□□□□ -0.36
RAB11FIP4-207ENST00000581460 OR10G8Q8NGN5 311 aa12.83□□□□□ -0.36
RAB11FIP4-207ENST00000581460 MANBALQ9NQG1 85 aa12.83□□□□□ -0.36
RAB11FIP4-207ENST00000581460 GNG13Q9P2W3 67 aa12.83□□□□□ -0.36
RAB11FIP4-207ENST00000581460 RBFOX3A6NFN3 312 aa12.82□□□□□ -0.36
RAB11FIP4-207ENST00000581460 SNAI2O43623 268 aa12.82□□□□□ -0.36
RAB11FIP4-207ENST00000581460 OR5AL1P0C617 328 aa12.82□□□□□ -0.36
RAB11FIP4-207ENST00000581460 SMIM17P0DL12 118 aa12.82□□□□□ -0.36
RAB11FIP4-207ENST00000581460 RPL35P42766 123 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP4-207ENST00000581460 NEXN-AS1Q8NBZ9 246 aa12.82□□□□□ -0.36
RAB11FIP4-207ENST00000581460 DNAJC30Q96LL9 226 aa12.82□□□□□ -0.36
RAB11FIP4-207ENST00000581460 TRBV6-8A0A0A6YYG3 113 aa12.81□□□□□ -0.36
RAB11FIP4-207ENST00000581460 CRPP02741 224 aa12.81□□□□□ -0.36
RAB11FIP4-207ENST00000581460 Q0VG73 95 aa12.81□□□□□ -0.36
RAB11FIP4-207ENST00000581460 TEX46H3BTG2 121 aa12.8□□□□□ -0.36
RAB11FIP4-207ENST00000581460 DAZAP1Q96EP5 407 aaKnown RBP12.8□□□□□ -0.36
RAB11FIP4-207ENST00000581460 AP1S3Q96PC3 154 aa12.8□□□□□ -0.36
RAB11FIP4-207ENST00000581460 SSBP4Q9BWG4 385 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP4-207ENST00000581460 PKIAP61925 76 aa12.79□□□□□ -0.36
RAB11FIP4-207ENST00000581460 EIF5AL1Q6IS14 154 aaKnown RBP12.79□□□□□ -0.36
RAB11FIP4-207ENST00000581460 C15orf54Q8N8G6 183 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms