RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 PGPA6NDG6 321 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 SLC17A3O00476 420 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 HIST1H1EP10412 219 aaKnown RBP9.91□□□□□ -0.82
IFT20-211ENST00000580991 RPL7P18124 248 aaKnown RBP9.91□□□□□ -0.82
IFT20-211ENST00000580991 RANP62826 216 aaKnown RBP9.91□□□□□ -0.82
IFT20-211ENST00000580991 KIR3DS1Q14943 382 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 BAGE2Q86Y30 109 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 OR10D4PQ8NGN7 298 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 FMC1Q96HJ9 113 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 LINC00467Q9BRT7 94 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 NIT2Q9NQR4 276 aa9.91□□□□□ -0.82
IFT20-211ENST00000580991 LRP1Q07954 4544 aaKnown RBP9.91□□□□□ -0.82
IFT20-211ENST00000580991 H3BRN7 92 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 PAX4O43316 350 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 GATCO43716 136 aaKnown RBP9.9□□□□□ -0.82
IFT20-211ENST00000580991 MT-ND6P03923 174 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 FABP4P15090 132 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 EVI2AP22794 236 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 GFI1BQ5VTD9 330 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 LYPD5Q6UWN5 251 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 BPIFA4PQ86YQ2 179 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 LINC00528Q8N1L1 170 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 FAM30AQ9NZY2 134 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 KLF12Q9Y4X4 402 aa9.9□□□□□ -0.82
IFT20-211ENST00000580991 ZNF324O75467 553 aaPredicted RBP9.89□□□□□ -0.83
IFT20-211ENST00000580991 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
IFT20-211ENST00000580991 PDZD11Q5EBL8 140 aa9.89□□□□□ -0.83
IFT20-211ENST00000580991 PACRGQ96M98 296 aaPredicted RBP9.89□□□□□ -0.83
IFT20-211ENST00000580991 HIST1H2BLQ99880 126 aa9.89□□□□□ -0.83
IFT20-211ENST00000580991 GNB1LQ9BYB4 327 aa9.89□□□□□ -0.83
IFT20-211ENST00000580991 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
IFT20-211ENST00000580991 A0A087X0K7 114 aa9.88□□□□□ -0.83
IFT20-211ENST00000580991 TRBV6-1A0A0K0K1D8 114 aa9.88□□□□□ -0.83
IFT20-211ENST00000580991 SMIM27A0A1W2PRY6 76 aa9.88□□□□□ -0.83
IFT20-211ENST00000580991 OXTP01178 125 aa9.88□□□□□ -0.83
IFT20-211ENST00000580991 GNG5P63218 68 aa9.88□□□□□ -0.83
IFT20-211ENST00000580991 CMTM2Q8TAZ6 248 aa9.88□□□□□ -0.83
IFT20-211ENST00000580991 TMEM18Q96B42 140 aa9.88□□□□□ -0.83
IFT20-211ENST00000580991 MRPL18Q9H0U6 180 aaKnown RBP9.88□□□□□ -0.83
IFT20-211ENST00000580991 PSCAO43653 123 aa9.87□□□□□ -0.83
IFT20-211ENST00000580991 TCRAP04437 139 aa9.87□□□□□ -0.83
IFT20-211ENST00000580991 MRPL23Q16540 153 aaKnown RBP9.87□□□□□ -0.83
IFT20-211ENST00000580991 RASL11AQ6T310 242 aa9.87□□□□□ -0.83
IFT20-211ENST00000580991 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
IFT20-211ENST00000580991 RPH3ALQ9UNE2 315 aa9.87□□□□□ -0.83
IFT20-211ENST00000580991 TRGV1A0A0A0MS02 117 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 TRAV34A0A0B4J273 112 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 K7EQM0 130 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 LTAP01374 205 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 PYY3Q5JQD4 70 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 C10orf126Q8N4M7 172 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 NHLRC2Q8NBF2 726 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 LINC00479Q96M42 142 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 GSN-AS1Q9NRJ2 163 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 PRO0255Q9UI72 69 aa9.86□□□□□ -0.83
IFT20-211ENST00000580991 TRBV19A0A075B6N1 114 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 TRAV12-3A0A0B4J271 114 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 HLA-DQA1P01909 254 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 IGLC2P0DOY2 106 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 SLAQ13239 276 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 PDE6HQ13956 83 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 CT83Q5H943 113 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 WFDC10BQ8IUB3 73 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 Q8N814 137 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 NUDT10Q8NFP7 164 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 NUDT11Q96G61 164 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
IFT20-211ENST00000580991 J3KRW8 73 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 CRYGDP07320 174 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 CRISP2P16562 243 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 TCL1AP56279 114 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 Q6ZSA8 131 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 Q86TA4 180 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 TMEM75Q8N9X5 138 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 C11orf72Q8NBR9 251 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 TSKUQ8WUA8 353 aa9.84□□□□□ -0.83
IFT20-211ENST00000580991 RPP21Q9H633 154 aaKnown RBP9.84□□□□□ -0.83
IFT20-211ENST00000580991 ZNF331Q9NQX6 463 aaPredicted RBP9.84□□□□□ -0.83
IFT20-211ENST00000580991 SERTM2A0A1B0GWG4 89 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 H3BTX0 84 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 SNRPCP09234 159 aaKnown RBP9.83□□□□□ -0.84
IFT20-211ENST00000580991 LEPP41159 167 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 CRYBA4P53673 196 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 PRR27Q6MZM9 219 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 TMEM136Q6ZRR5 245 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 ATP5L2Q7Z4Y8 100 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 DAZAP1Q96EP5 407 aaKnown RBP9.83□□□□□ -0.84
IFT20-211ENST00000580991 ODF3Q96PU9 254 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 SLC50A1Q9BRV3 221 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 HHLA3Q9XRX5 114 aa9.83□□□□□ -0.84
IFT20-211ENST00000580991 A8MWL6 223 aa9.82□□□□□ -0.84
IFT20-211ENST00000580991 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
IFT20-211ENST00000580991 SPINK4O60575 86 aa9.82□□□□□ -0.84
IFT20-211ENST00000580991 P01737 135 aa9.82□□□□□ -0.84
IFT20-211ENST00000580991 RAB4BP61018 213 aa9.82□□□□□ -0.84
IFT20-211ENST00000580991 Q0VG73 95 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms