RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 SPINK4O60575 86 aa11.02□□□□□ -0.65
SS18-216ENST00000580751 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.65
SS18-216ENST00000580751 TMEM136Q6ZRR5 245 aa11.02□□□□□ -0.65
SS18-216ENST00000580751 LINC00612Q8N6U2 182 aa11.02□□□□□ -0.65
SS18-216ENST00000580751 RASL10AQ92737 203 aa11.02□□□□□ -0.65
SS18-216ENST00000580751 AP1S3Q96PC3 154 aa11.02□□□□□ -0.65
SS18-216ENST00000580751 CSMD3Q7Z407 3707 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 A8MWV9 139 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 CIDEAO60543 219 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 RPS10P46783 165 aaKnown RBP11.01□□□□□ -0.65
SS18-216ENST00000580751 CAMPP49913 170 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 CASC10Q5T4H9 136 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 CEMP1Q6PRD7 247 aaPredicted RBP11.01□□□□□ -0.65
SS18-216ENST00000580751 Q6ZTI0 123 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 TENM2Q9NT68 2774 aa11.01□□□□□ -0.65
SS18-216ENST00000580751 DEFB131BA0A096LNP1 70 aa11□□□□□ -0.65
SS18-216ENST00000580751 GAGE12BA1L429 117 aa11□□□□□ -0.65
SS18-216ENST00000580751 M0R381 172 aa11□□□□□ -0.65
SS18-216ENST00000580751 GAGE7O76087 117 aa11□□□□□ -0.65
SS18-216ENST00000580751 GAGE12FP0CL80 117 aa11□□□□□ -0.65
SS18-216ENST00000580751 GAGE12GP0CL81 117 aa11□□□□□ -0.65
SS18-216ENST00000580751 GAGE12IP0CL82 117 aa11□□□□□ -0.65
SS18-216ENST00000580751 KLK5Q9Y337 293 aaPredicted RBP11□□□□□ -0.65
SS18-216ENST00000580751 TRAPPC1Q9Y5R8 145 aa11□□□□□ -0.65
SS18-216ENST00000580751 TRGV2A0A075B6R0 118 aa10.99□□□□□ -0.65
SS18-216ENST00000580751 ATP5G1P05496 136 aa10.99□□□□□ -0.65
SS18-216ENST00000580751 RAB4BP61018 213 aa10.99□□□□□ -0.65
SS18-216ENST00000580751 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
SS18-216ENST00000580751 MRPL16Q9NX20 251 aaKnown RBP10.99□□□□□ -0.65
SS18-216ENST00000580751 APCSP02743 223 aa10.98□□□□□ -0.65
SS18-216ENST00000580751 PPBPP02775 128 aa10.98□□□□□ -0.65
SS18-216ENST00000580751 SMIM17P0DL12 118 aa10.98□□□□□ -0.65
SS18-216ENST00000580751 FAM104BQ5XKR9 115 aa10.98□□□□□ -0.65
SS18-216ENST00000580751 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.98□□□□□ -0.65
SS18-216ENST00000580751 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
SS18-216ENST00000580751 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
SS18-216ENST00000580751 STARD9Q9P2P6 4700 aa10.98□□□□□ -0.65
SS18-216ENST00000580751 RHODO00212 210 aa10.97□□□□□ -0.65
SS18-216ENST00000580751 HTN3P15516 51 aa10.97□□□□□ -0.65
SS18-216ENST00000580751 POM121L12Q8N7R1 296 aa10.97□□□□□ -0.65
SS18-216ENST00000580751 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
SS18-216ENST00000580751 MUC21A0A0G2JKD1 596 aa10.96□□□□□ -0.65
SS18-216ENST00000580751 MUC21A0A140T8X8 626 aa10.96□□□□□ -0.65
SS18-216ENST00000580751 ZFP2Q6ZN57 461 aa10.96□□□□□ -0.65
SS18-216ENST00000580751 KIF25-AS1Q9Y6Z4 181 aa10.96□□□□□ -0.65
SS18-216ENST00000580751 C1orf196B1AJZ1 125 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 PHOX2AO14813 284 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 RS1O15537 224 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 TRGC2P03986 189 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 EVI2AP22794 236 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 FABP9Q0Z7S8 132 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 MRAP2Q96G30 205 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 LAMTOR2Q9Y2Q5 125 aa10.95□□□□□ -0.66
SS18-216ENST00000580751 F5H768 121 aa10.94□□□□□ -0.66
SS18-216ENST00000580751 PPP1R17O96001 155 aa10.94□□□□□ -0.66
SS18-216ENST00000580751 CRYGDP07320 174 aa10.94□□□□□ -0.66
SS18-216ENST00000580751 RAB4AP20338 218 aa10.94□□□□□ -0.66
SS18-216ENST00000580751 TCTAP57738 103 aa10.94□□□□□ -0.66
SS18-216ENST00000580751 SSTP61278 116 aa10.94□□□□□ -0.66
SS18-216ENST00000580751 SLAQ13239 276 aa10.94□□□□□ -0.66
SS18-216ENST00000580751 C14orf178Q8N769 122 aaPredicted RBP10.94□□□□□ -0.66
SS18-216ENST00000580751 MUC4Q99102 2169 aa10.93□□□□□ -0.66
SS18-216ENST00000580751 TRAV4A0A0B4J268 109 aa10.93□□□□□ -0.66
SS18-216ENST00000580751 IGLL5B9A064 214 aa10.93□□□□□ -0.66
SS18-216ENST00000580751 RAB5BP61020 215 aa10.93□□□□□ -0.66
SS18-216ENST00000580751 AMN1Q8IY45 258 aa10.93□□□□□ -0.66
SS18-216ENST00000580751 LINC00315P59091 139 aa10.92□□□□□ -0.66
SS18-216ENST00000580751 CFAP126Q5VTH2 177 aa10.92□□□□□ -0.66
SS18-216ENST00000580751 ORMDL3Q8N138 153 aa10.92□□□□□ -0.66
SS18-216ENST00000580751 RNF185Q96GF1 192 aa10.92□□□□□ -0.66
SS18-216ENST00000580751 DYNC2H1Q8NCM8 4307 aaKnown RBP10.92□□□□□ -0.66
SS18-216ENST00000580751 H7C1H1 209 aa10.91□□□□□ -0.66
SS18-216ENST00000580751 MRPL51Q4U2R6 128 aaKnown RBP10.91□□□□□ -0.66
SS18-216ENST00000580751 UFSP1Q6NVU6 142 aa10.91□□□□□ -0.66
SS18-216ENST00000580751 OR4C5Q8NGB2 326 aa10.91□□□□□ -0.66
SS18-216ENST00000580751 IGHV3-53P01767 116 aa10.9□□□□□ -0.66
SS18-216ENST00000580751 HOXA5P20719 270 aa10.9□□□□□ -0.66
SS18-216ENST00000580751 CKS2P33552 79 aa10.9□□□□□ -0.66
SS18-216ENST00000580751 ALKBH7Q9BT30 221 aaPredicted RBP10.9□□□□□ -0.66
SS18-216ENST00000580751 OR10J3Q5JRS4 329 aa10.89□□□□□ -0.67
SS18-216ENST00000580751 ZNF479Q96JC4 524 aa10.89□□□□□ -0.67
SS18-216ENST00000580751 PLECQ15149 4684 aaKnown RBP10.89□□□□□ -0.67
SS18-216ENST00000580751 TRAV26-1A0A087WT03 109 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 A0A087WWL8 130 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 TRGV4A0A0C4DH28 118 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 Q0VG73 95 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 C15orf53Q8NAA6 179 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 PRELID3AQ96N28 172 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 SAMD10Q9BYL1 202 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 JPT2Q9H910 190 aa10.88□□□□□ -0.67
SS18-216ENST00000580751 PRSS47A8MTI9 375 aa10.87□□□□□ -0.67
SS18-216ENST00000580751 D6R8Y8 96 aa10.87□□□□□ -0.67
SS18-216ENST00000580751 H3BNG1 76 aa10.87□□□□□ -0.67
SS18-216ENST00000580751 HIST1H2BKO60814 126 aa10.87□□□□□ -0.67
SS18-216ENST00000580751 HIST1H2BJP06899 126 aa10.87□□□□□ -0.67
SS18-216ENST00000580751 MGPP08493 103 aa10.87□□□□□ -0.67
SS18-216ENST00000580751 HIST1H2BOP23527 126 aa10.87□□□□□ -0.67
SS18-216ENST00000580751 SRIP30626 198 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms